GO Enrichment Analysis of Co-expressed Genes with
AT3G43540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 2 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 3 | GO:0006427: histidyl-tRNA aminoacylation | 1.39E-05 |
| 4 | GO:0006557: S-adenosylmethioninamine biosynthetic process | 6.55E-05 |
| 5 | GO:0009152: purine ribonucleotide biosynthetic process | 9.94E-05 |
| 6 | GO:0046653: tetrahydrofolate metabolic process | 9.94E-05 |
| 7 | GO:0000470: maturation of LSU-rRNA | 2.22E-04 |
| 8 | GO:0009704: de-etiolation | 3.65E-04 |
| 9 | GO:0000105: histidine biosynthetic process | 3.65E-04 |
| 10 | GO:0048564: photosystem I assembly | 3.65E-04 |
| 11 | GO:0071482: cellular response to light stimulus | 4.16E-04 |
| 12 | GO:0000373: Group II intron splicing | 4.68E-04 |
| 13 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.68E-04 |
| 14 | GO:0006098: pentose-phosphate shunt | 4.68E-04 |
| 15 | GO:0006006: glucose metabolic process | 7.52E-04 |
| 16 | GO:0006094: gluconeogenesis | 7.52E-04 |
| 17 | GO:0016575: histone deacetylation | 1.07E-03 |
| 18 | GO:0070417: cellular response to cold | 1.41E-03 |
| 19 | GO:0001666: response to hypoxia | 2.30E-03 |
| 20 | GO:0010027: thylakoid membrane organization | 2.30E-03 |
| 21 | GO:0009631: cold acclimation | 3.03E-03 |
| 22 | GO:0009853: photorespiration | 3.22E-03 |
| 23 | GO:0006855: drug transmembrane transport | 4.26E-03 |
| 24 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.81E-03 |
| 25 | GO:0006417: regulation of translation | 5.03E-03 |
| 26 | GO:0006096: glycolytic process | 5.26E-03 |
| 27 | GO:0009058: biosynthetic process | 7.25E-03 |
| 28 | GO:0009658: chloroplast organization | 1.19E-02 |
| 29 | GO:0015979: photosynthesis | 1.52E-02 |
| 30 | GO:0006397: mRNA processing | 1.88E-02 |
| 31 | GO:0006508: proteolysis | 1.90E-02 |
| 32 | GO:0006412: translation | 3.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 2 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 3 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 4 | GO:0004821: histidine-tRNA ligase activity | 1.39E-05 |
| 5 | GO:0004424: imidazoleglycerol-phosphate dehydratase activity | 1.39E-05 |
| 6 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.55E-05 |
| 7 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.55E-05 |
| 8 | GO:0004014: adenosylmethionine decarboxylase activity | 6.55E-05 |
| 9 | GO:0048487: beta-tubulin binding | 9.94E-05 |
| 10 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.37E-04 |
| 11 | GO:0004332: fructose-bisphosphate aldolase activity | 2.22E-04 |
| 12 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.16E-04 |
| 13 | GO:0015386: potassium:proton antiporter activity | 6.34E-04 |
| 14 | GO:0004407: histone deacetylase activity | 1.00E-03 |
| 15 | GO:0005528: FK506 binding | 1.00E-03 |
| 16 | GO:0015079: potassium ion transmembrane transporter activity | 1.07E-03 |
| 17 | GO:0004721: phosphoprotein phosphatase activity | 2.57E-03 |
| 18 | GO:0015238: drug transmembrane transporter activity | 2.84E-03 |
| 19 | GO:0050661: NADP binding | 3.52E-03 |
| 20 | GO:0004185: serine-type carboxypeptidase activity | 3.83E-03 |
| 21 | GO:0043621: protein self-association | 4.04E-03 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.26E-03 |
| 23 | GO:0005509: calcium ion binding | 5.68E-03 |
| 24 | GO:0019843: rRNA binding | 6.99E-03 |
| 25 | GO:0015297: antiporter activity | 8.46E-03 |
| 26 | GO:0003723: RNA binding | 1.05E-02 |
| 27 | GO:0003824: catalytic activity | 4.85E-02 |
| 28 | GO:0005215: transporter activity | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.45E-08 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.81E-06 |
| 3 | GO:0031977: thylakoid lumen | 3.73E-06 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.89E-05 |
| 5 | GO:0009654: photosystem II oxygen evolving complex | 2.17E-05 |
| 6 | GO:0031357: integral component of chloroplast inner membrane | 3.65E-05 |
| 7 | GO:0019898: extrinsic component of membrane | 5.23E-05 |
| 8 | GO:0009570: chloroplast stroma | 2.94E-04 |
| 9 | GO:0009579: thylakoid | 4.12E-04 |
| 10 | GO:0030095: chloroplast photosystem II | 8.13E-04 |
| 11 | GO:0031969: chloroplast membrane | 1.20E-03 |
| 12 | GO:0030529: intracellular ribonucleoprotein complex | 2.30E-03 |
| 13 | GO:0005856: cytoskeleton | 4.15E-03 |
| 14 | GO:0009941: chloroplast envelope | 5.52E-03 |
| 15 | GO:0022625: cytosolic large ribosomal subunit | 1.43E-02 |
| 16 | GO:0016020: membrane | 3.82E-02 |
| 17 | GO:0005829: cytosol | 4.41E-02 |
| 18 | GO:0005840: ribosome | 4.69E-02 |