GO Enrichment Analysis of Co-expressed Genes with
AT3G43230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 2 | GO:0000244: spliceosomal tri-snRNP complex assembly | 0.00E+00 |
| 3 | GO:0009083: branched-chain amino acid catabolic process | 0.00E+00 |
| 4 | GO:0019450: L-cysteine catabolic process to pyruvate | 0.00E+00 |
| 5 | GO:0016236: macroautophagy | 0.00E+00 |
| 6 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 7 | GO:0071470: cellular response to osmotic stress | 3.17E-06 |
| 8 | GO:0030242: pexophagy | 2.41E-05 |
| 9 | GO:0090421: embryonic meristem initiation | 2.41E-05 |
| 10 | GO:0019395: fatty acid oxidation | 6.16E-05 |
| 11 | GO:0071472: cellular response to salt stress | 9.62E-05 |
| 12 | GO:0006623: protein targeting to vacuole | 1.13E-04 |
| 13 | GO:0006552: leucine catabolic process | 2.21E-04 |
| 14 | GO:0045324: late endosome to vacuole transport | 2.21E-04 |
| 15 | GO:0006346: methylation-dependent chromatin silencing | 2.21E-04 |
| 16 | GO:0010222: stem vascular tissue pattern formation | 2.21E-04 |
| 17 | GO:0070534: protein K63-linked ubiquitination | 2.21E-04 |
| 18 | GO:0046907: intracellular transport | 2.84E-04 |
| 19 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 3.51E-04 |
| 20 | GO:0006301: postreplication repair | 3.51E-04 |
| 21 | GO:0019509: L-methionine salvage from methylthioadenosine | 4.20E-04 |
| 22 | GO:0048280: vesicle fusion with Golgi apparatus | 4.20E-04 |
| 23 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 5.68E-04 |
| 24 | GO:0030091: protein repair | 5.68E-04 |
| 25 | GO:0009880: embryonic pattern specification | 6.45E-04 |
| 26 | GO:0001708: cell fate specification | 7.25E-04 |
| 27 | GO:0006896: Golgi to vacuole transport | 8.92E-04 |
| 28 | GO:0010039: response to iron ion | 1.35E-03 |
| 29 | GO:0071732: cellular response to nitric oxide | 1.35E-03 |
| 30 | GO:0010053: root epidermal cell differentiation | 1.35E-03 |
| 31 | GO:0009695: jasmonic acid biosynthetic process | 1.65E-03 |
| 32 | GO:0031408: oxylipin biosynthetic process | 1.76E-03 |
| 33 | GO:0080092: regulation of pollen tube growth | 1.87E-03 |
| 34 | GO:0071369: cellular response to ethylene stimulus | 1.98E-03 |
| 35 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.21E-03 |
| 36 | GO:0042147: retrograde transport, endosome to Golgi | 2.21E-03 |
| 37 | GO:0070417: cellular response to cold | 2.21E-03 |
| 38 | GO:0010183: pollen tube guidance | 2.70E-03 |
| 39 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.82E-03 |
| 40 | GO:0006635: fatty acid beta-oxidation | 2.82E-03 |
| 41 | GO:0007264: small GTPase mediated signal transduction | 2.95E-03 |
| 42 | GO:0016032: viral process | 2.95E-03 |
| 43 | GO:0009630: gravitropism | 2.95E-03 |
| 44 | GO:0071281: cellular response to iron ion | 3.08E-03 |
| 45 | GO:0006914: autophagy | 3.22E-03 |
| 46 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.05E-03 |
| 47 | GO:0006499: N-terminal protein myristoylation | 4.64E-03 |
| 48 | GO:0009631: cold acclimation | 4.80E-03 |
| 49 | GO:0034599: cellular response to oxidative stress | 5.26E-03 |
| 50 | GO:0009846: pollen germination | 7.11E-03 |
| 51 | GO:0000398: mRNA splicing, via spliceosome | 1.06E-02 |
| 52 | GO:0009845: seed germination | 1.18E-02 |
| 53 | GO:0006470: protein dephosphorylation | 1.54E-02 |
| 54 | GO:0015031: protein transport | 1.55E-02 |
| 55 | GO:0008380: RNA splicing | 1.59E-02 |
| 56 | GO:0046686: response to cadmium ion | 1.91E-02 |
| 57 | GO:0006970: response to osmotic stress | 2.02E-02 |
| 58 | GO:0009860: pollen tube growth | 2.02E-02 |
| 59 | GO:0045454: cell redox homeostasis | 2.54E-02 |
| 60 | GO:0009738: abscisic acid-activated signaling pathway | 4.33E-02 |
| 61 | GO:0009555: pollen development | 4.43E-02 |
| 62 | GO:0009611: response to wounding | 4.50E-02 |
| 63 | GO:0055114: oxidation-reduction process | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008470: isovaleryl-CoA dehydrogenase activity | 0.00E+00 |
| 2 | GO:0070191: methionine-R-sulfoxide reductase activity | 0.00E+00 |
| 3 | GO:0080146: L-cysteine desulfhydrase activity | 0.00E+00 |
| 4 | GO:0046522: S-methyl-5-thioribose kinase activity | 0.00E+00 |
| 5 | GO:0003988: acetyl-CoA C-acyltransferase activity | 6.16E-05 |
| 6 | GO:0004180: carboxypeptidase activity | 1.09E-04 |
| 7 | GO:0019003: GDP binding | 1.09E-04 |
| 8 | GO:0004416: hydroxyacylglutathione hydrolase activity | 1.62E-04 |
| 9 | GO:0050660: flavin adenine dinucleotide binding | 2.08E-04 |
| 10 | GO:0016004: phospholipase activator activity | 2.21E-04 |
| 11 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 4.20E-04 |
| 12 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 4.20E-04 |
| 13 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 7.25E-04 |
| 14 | GO:0005525: GTP binding | 1.44E-03 |
| 15 | GO:0004725: protein tyrosine phosphatase activity | 1.45E-03 |
| 16 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.76E-03 |
| 17 | GO:0047134: protein-disulfide reductase activity | 2.21E-03 |
| 18 | GO:0004791: thioredoxin-disulfide reductase activity | 2.57E-03 |
| 19 | GO:0004872: receptor activity | 2.70E-03 |
| 20 | GO:0003924: GTPase activity | 3.41E-03 |
| 21 | GO:0009055: electron carrier activity | 3.65E-03 |
| 22 | GO:0008236: serine-type peptidase activity | 4.20E-03 |
| 23 | GO:0003746: translation elongation factor activity | 5.11E-03 |
| 24 | GO:0000149: SNARE binding | 5.42E-03 |
| 25 | GO:0005484: SNAP receptor activity | 6.08E-03 |
| 26 | GO:0031625: ubiquitin protein ligase binding | 8.02E-03 |
| 27 | GO:0042802: identical protein binding | 1.66E-02 |
| 28 | GO:0061630: ubiquitin protein ligase activity | 2.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 2 | GO:0005690: U4atac snRNP | 0.00E+00 |
| 3 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 2.41E-05 |
| 4 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 2.41E-05 |
| 5 | GO:0005770: late endosome | 9.62E-05 |
| 6 | GO:0032586: protein storage vacuole membrane | 2.21E-04 |
| 7 | GO:0031372: UBC13-MMS2 complex | 2.21E-04 |
| 8 | GO:0005687: U4 snRNP | 2.84E-04 |
| 9 | GO:0097526: spliceosomal tri-snRNP complex | 2.84E-04 |
| 10 | GO:0030140: trans-Golgi network transport vesicle | 3.51E-04 |
| 11 | GO:0031902: late endosome membrane | 3.62E-04 |
| 12 | GO:0012507: ER to Golgi transport vesicle membrane | 5.68E-04 |
| 13 | GO:0009514: glyoxysome | 6.45E-04 |
| 14 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 6.45E-04 |
| 15 | GO:0000326: protein storage vacuole | 6.45E-04 |
| 16 | GO:0071011: precatalytic spliceosome | 8.07E-04 |
| 17 | GO:0015030: Cajal body | 8.07E-04 |
| 18 | GO:0048471: perinuclear region of cytoplasm | 9.78E-04 |
| 19 | GO:0005759: mitochondrial matrix | 1.13E-03 |
| 20 | GO:0005789: endoplasmic reticulum membrane | 3.20E-03 |
| 21 | GO:0005643: nuclear pore | 4.34E-03 |
| 22 | GO:0000325: plant-type vacuole | 4.80E-03 |
| 23 | GO:0005783: endoplasmic reticulum | 5.21E-03 |
| 24 | GO:0031201: SNARE complex | 5.75E-03 |
| 25 | GO:0005774: vacuolar membrane | 9.02E-03 |
| 26 | GO:0005802: trans-Golgi network | 9.64E-03 |
| 27 | GO:0005773: vacuole | 1.55E-02 |
| 28 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.04E-02 |
| 29 | GO:0005794: Golgi apparatus | 2.16E-02 |
| 30 | GO:0043231: intracellular membrane-bounded organelle | 3.16E-02 |
| 31 | GO:0005829: cytosol | 4.61E-02 |
| 32 | GO:0005777: peroxisome | 4.89E-02 |