co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G29270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043171: peptide catabolic process	0.00E+00
2	GO:0000390: spliceosomal complex disassembly	0.00E+00
3	GO:0019450: L-cysteine catabolic process to pyruvate	0.00E+00
4	GO:0051928: positive regulation of calcium ion transport	0.00E+00
5	GO:0010163: high-affinity potassium ion import	1.74E-04
6	GO:0009308: amine metabolic process	1.74E-04
7	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	1.74E-04
8	GO:2000377: regulation of reactive oxygen species metabolic process	2.07E-04
9	GO:0042344: indole glucosinolate catabolic process	2.93E-04
10	GO:0090630: activation of GTPase activity	2.93E-04
11	GO:0006809: nitric oxide biosynthetic process	4.23E-04
12	GO:0009113: purine nucleobase biosynthetic process	4.23E-04
13	GO:1901332: negative regulation of lateral root development	4.23E-04
14	GO:0006882: cellular zinc ion homeostasis	4.23E-04
15	GO:0015749: monosaccharide transport	4.23E-04
16	GO:0006878: cellular copper ion homeostasis	5.65E-04
17	GO:0006646: phosphatidylethanolamine biosynthetic process	5.65E-04
18	GO:0043097: pyrimidine nucleoside salvage	7.14E-04
19	GO:0098719: sodium ion import across plasma membrane	7.14E-04
20	GO:0006206: pyrimidine nucleobase metabolic process	8.73E-04
21	GO:0006694: steroid biosynthetic process	1.04E-03
22	GO:0009396: folic acid-containing compound biosynthetic process	1.21E-03
23	GO:0006333: chromatin assembly or disassembly	1.21E-03
24	GO:0098869: cellular oxidant detoxification	1.21E-03
25	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.21E-03
26	GO:0006605: protein targeting	1.40E-03
27	GO:0009415: response to water	1.40E-03
28	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.01E-03
29	GO:0008202: steroid metabolic process	2.01E-03
30	GO:0051453: regulation of intracellular pH	2.01E-03
31	GO:0035999: tetrahydrofolate interconversion	2.01E-03
32	GO:0009682: induced systemic resistance	2.46E-03
33	GO:0052544: defense response by callose deposition in cell wall	2.46E-03
34	GO:0016925: protein sumoylation	2.70E-03
35	GO:2000012: regulation of auxin polar transport	2.94E-03
36	GO:0009695: jasmonic acid biosynthetic process	4.26E-03
37	GO:0006825: copper ion transport	4.26E-03
38	GO:0009269: response to desiccation	4.54E-03
39	GO:0010227: floral organ abscission	5.13E-03
40	GO:0006470: protein dephosphorylation	5.61E-03
41	GO:0042391: regulation of membrane potential	6.05E-03
42	GO:0080022: primary root development	6.05E-03
43	GO:0010051: xylem and phloem pattern formation	6.05E-03
44	GO:0008360: regulation of cell shape	6.38E-03
45	GO:0010182: sugar mediated signaling pathway	6.38E-03
46	GO:0046323: glucose import	6.38E-03
47	GO:0048544: recognition of pollen	6.70E-03
48	GO:0006814: sodium ion transport	6.70E-03
49	GO:0042752: regulation of circadian rhythm	6.70E-03
50	GO:0008654: phospholipid biosynthetic process	7.04E-03
51	GO:0006623: protein targeting to vacuole	7.04E-03
52	GO:0000302: response to reactive oxygen species	7.38E-03
53	GO:0006635: fatty acid beta-oxidation	7.38E-03
54	GO:0009737: response to abscisic acid	7.59E-03
55	GO:0071281: cellular response to iron ion	8.07E-03
56	GO:0019760: glucosinolate metabolic process	8.43E-03
57	GO:0009723: response to ethylene	8.78E-03
58	GO:0071805: potassium ion transmembrane transport	8.79E-03
59	GO:0010286: heat acclimation	8.79E-03
60	GO:0009911: positive regulation of flower development	9.54E-03
61	GO:0001666: response to hypoxia	9.54E-03
62	GO:0016126: sterol biosynthetic process	9.54E-03
63	GO:0048573: photoperiodism, flowering	1.07E-02
64	GO:0006950: response to stress	1.07E-02
65	GO:0016049: cell growth	1.11E-02
66	GO:0042742: defense response to bacterium	1.13E-02
67	GO:0009817: defense response to fungus, incompatible interaction	1.15E-02
68	GO:0006979: response to oxidative stress	1.15E-02
69	GO:0006886: intracellular protein transport	1.16E-02
70	GO:0006811: ion transport	1.23E-02
71	GO:0006499: N-terminal protein myristoylation	1.23E-02
72	GO:0009631: cold acclimation	1.27E-02
73	GO:0010119: regulation of stomatal movement	1.27E-02
74	GO:0010043: response to zinc ion	1.27E-02
75	GO:0006865: amino acid transport	1.32E-02
76	GO:0016051: carbohydrate biosynthetic process	1.36E-02
77	GO:0009651: response to salt stress	1.51E-02
78	GO:0006897: endocytosis	1.54E-02
79	GO:0042542: response to hydrogen peroxide	1.58E-02
80	GO:0009926: auxin polar transport	1.63E-02
81	GO:0009873: ethylene-activated signaling pathway	1.80E-02
82	GO:0006813: potassium ion transport	2.01E-02
83	GO:0051603: proteolysis involved in cellular protein catabolic process	2.06E-02
84	GO:0009909: regulation of flower development	2.16E-02
85	GO:0009626: plant-type hypersensitive response	2.37E-02
86	GO:0009620: response to fungus	2.42E-02
87	GO:0009555: pollen development	2.48E-02
88	GO:0035556: intracellular signal transduction	2.62E-02
89	GO:0018105: peptidyl-serine phosphorylation	2.64E-02
90	GO:0006396: RNA processing	2.64E-02
91	GO:0000398: mRNA splicing, via spliceosome	2.86E-02
92	GO:0009058: biosynthetic process	3.15E-02
93	GO:0009845: seed germination	3.20E-02
94	GO:0006511: ubiquitin-dependent protein catabolic process	3.36E-02
95	GO:0010150: leaf senescence	3.81E-02
96	GO:0010228: vegetative to reproductive phase transition of meristem	3.94E-02
97	GO:0009617: response to bacterium	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0080146: L-cysteine desulfhydrase activity	0.00E+00
3	GO:1990446: U1 snRNP binding	0.00E+00
4	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
5	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	7.23E-05
6	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	7.23E-05
7	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	7.23E-05
8	GO:0052595: aliphatic-amine oxidase activity	7.23E-05
9	GO:0070006: metalloaminopeptidase activity	7.23E-05
10	GO:0019707: protein-cysteine S-acyltransferase activity	7.23E-05
11	GO:0009679: hexose:proton symporter activity	7.23E-05
12	GO:0035671: enone reductase activity	7.23E-05
13	GO:0010013: N-1-naphthylphthalamic acid binding	7.23E-05
14	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	7.23E-05
15	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	7.23E-05
16	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	1.74E-04
17	GO:0004329: formate-tetrahydrofolate ligase activity	1.74E-04
18	GO:0004609: phosphatidylserine decarboxylase activity	1.74E-04
19	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	1.74E-04
20	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	1.74E-04
21	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.74E-04
22	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	2.93E-04
23	GO:0019948: SUMO activating enzyme activity	2.93E-04
24	GO:0005047: signal recognition particle binding	2.93E-04
25	GO:0019829: cation-transporting ATPase activity	2.93E-04
26	GO:0030527: structural constituent of chromatin	4.23E-04
27	GO:0004165: dodecenoyl-CoA delta-isomerase activity	4.23E-04
28	GO:0004300: enoyl-CoA hydratase activity	4.23E-04
29	GO:0042277: peptide binding	5.65E-04
30	GO:0015145: monosaccharide transmembrane transporter activity	7.14E-04
31	GO:0019137: thioglucosidase activity	8.73E-04
32	GO:0070300: phosphatidic acid binding	1.04E-03
33	GO:0004849: uridine kinase activity	1.04E-03
34	GO:0004602: glutathione peroxidase activity	1.04E-03
35	GO:0004525: ribonuclease III activity	1.40E-03
36	GO:0005375: copper ion transmembrane transporter activity	1.59E-03
37	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.80E-03
38	GO:0015020: glucuronosyltransferase activity	2.23E-03
39	GO:0015386: potassium:proton antiporter activity	2.46E-03
40	GO:0004177: aminopeptidase activity	2.46E-03
41	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.70E-03
42	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.94E-03
43	GO:0008081: phosphoric diester hydrolase activity	2.94E-03
44	GO:0008131: primary amine oxidase activity	3.19E-03
45	GO:0030552: cAMP binding	3.44E-03
46	GO:0030553: cGMP binding	3.44E-03
47	GO:0004725: protein tyrosine phosphatase activity	3.71E-03
48	GO:0005216: ion channel activity	4.26E-03
49	GO:0015079: potassium ion transmembrane transporter activity	4.26E-03
50	GO:0019706: protein-cysteine S-palmitoyltransferase activity	4.54E-03
51	GO:0005249: voltage-gated potassium channel activity	6.05E-03
52	GO:0030551: cyclic nucleotide binding	6.05E-03
53	GO:0005507: copper ion binding	7.25E-03
54	GO:0048038: quinone binding	7.38E-03
55	GO:0046982: protein heterodimerization activity	7.45E-03
56	GO:0005516: calmodulin binding	7.78E-03
57	GO:0015385: sodium:proton antiporter activity	8.07E-03
58	GO:0008237: metallopeptidase activity	8.79E-03
59	GO:0016301: kinase activity	9.13E-03
60	GO:0005509: calcium ion binding	1.02E-02
61	GO:0008375: acetylglucosaminyltransferase activity	1.03E-02
62	GO:0102483: scopolin beta-glucosidase activity	1.07E-02
63	GO:0005096: GTPase activator activity	1.19E-02
64	GO:0004722: protein serine/threonine phosphatase activity	1.24E-02
65	GO:0003677: DNA binding	1.39E-02
66	GO:0008422: beta-glucosidase activity	1.45E-02
67	GO:0035091: phosphatidylinositol binding	1.72E-02
68	GO:0003676: nucleic acid binding	2.04E-02
69	GO:0015171: amino acid transmembrane transporter activity	2.16E-02
70	GO:0016874: ligase activity	2.47E-02
71	GO:0016740: transferase activity	3.02E-02
72	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.09E-02
73	GO:0015144: carbohydrate transmembrane transporter activity	3.44E-02
74	GO:0005351: sugar:proton symporter activity	3.75E-02
75	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.52E-02
76	GO:0042802: identical protein binding	4.52E-02
77	GO:0044212: transcription regulatory region DNA binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0031981: nuclear lumen	0.00E+00
2	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
3	GO:0005785: signal recognition particle receptor complex	0.00E+00
4	GO:0005886: plasma membrane	2.14E-05
5	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	1.74E-04
6	GO:0005829: cytosol	2.98E-04
7	GO:0005802: trans-Golgi network	3.23E-04
8	GO:0005768: endosome	4.08E-04
9	GO:0000786: nucleosome	1.13E-03
10	GO:0030131: clathrin adaptor complex	1.40E-03
11	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.59E-03
12	GO:0031090: organelle membrane	1.80E-03
13	GO:0030665: clathrin-coated vesicle membrane	2.01E-03
14	GO:0017119: Golgi transport complex	2.23E-03
15	GO:0030125: clathrin vesicle coat	2.23E-03
16	GO:0010008: endosome membrane	2.46E-03
17	GO:0000139: Golgi membrane	3.82E-03
18	GO:0005905: clathrin-coated pit	4.54E-03
19	GO:0005783: endoplasmic reticulum	4.56E-03
20	GO:0016021: integral component of membrane	5.00E-03
21	GO:0005777: peroxisome	5.52E-03
22	GO:0000785: chromatin	7.72E-03
23	GO:0005794: Golgi apparatus	1.05E-02
24	GO:0031902: late endosome membrane	1.54E-02
25	GO:0005887: integral component of plasma membrane	1.89E-02