GO Enrichment Analysis of Co-expressed Genes with
AT3G29240
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 2 | GO:0010336: gibberellic acid homeostasis | 0.00E+00 |
| 3 | GO:0010423: negative regulation of brassinosteroid biosynthetic process | 0.00E+00 |
| 4 | GO:0015843: methylammonium transport | 0.00E+00 |
| 5 | GO:0009259: ribonucleotide metabolic process | 0.00E+00 |
| 6 | GO:0015822: ornithine transport | 0.00E+00 |
| 7 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 8 | GO:0080167: response to karrikin | 8.41E-07 |
| 9 | GO:0010076: maintenance of floral meristem identity | 5.87E-05 |
| 10 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 5.87E-05 |
| 11 | GO:0009263: deoxyribonucleotide biosynthetic process | 1.46E-04 |
| 12 | GO:0071370: cellular response to gibberellin stimulus | 1.46E-04 |
| 13 | GO:0006659: phosphatidylserine biosynthetic process | 1.46E-04 |
| 14 | GO:0033481: galacturonate biosynthetic process | 1.46E-04 |
| 15 | GO:0048438: floral whorl development | 1.46E-04 |
| 16 | GO:0000066: mitochondrial ornithine transport | 1.46E-04 |
| 17 | GO:0009186: deoxyribonucleoside diphosphate metabolic process | 1.46E-04 |
| 18 | GO:0016119: carotene metabolic process | 1.46E-04 |
| 19 | GO:1901349: glucosinolate transport | 1.46E-04 |
| 20 | GO:0090449: phloem glucosinolate loading | 1.46E-04 |
| 21 | GO:0000272: polysaccharide catabolic process | 2.59E-04 |
| 22 | GO:0010218: response to far red light | 2.67E-04 |
| 23 | GO:0007154: cell communication | 3.33E-04 |
| 24 | GO:0010220: positive regulation of vernalization response | 3.33E-04 |
| 25 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.33E-04 |
| 26 | GO:0010114: response to red light | 4.47E-04 |
| 27 | GO:0044375: regulation of peroxisome size | 5.47E-04 |
| 28 | GO:0006000: fructose metabolic process | 5.47E-04 |
| 29 | GO:0071555: cell wall organization | 6.64E-04 |
| 30 | GO:0006857: oligopeptide transport | 7.10E-04 |
| 31 | GO:0009411: response to UV | 7.64E-04 |
| 32 | GO:0009963: positive regulation of flavonoid biosynthetic process | 7.83E-04 |
| 33 | GO:0042823: pyridoxal phosphate biosynthetic process | 7.83E-04 |
| 34 | GO:0015696: ammonium transport | 7.83E-04 |
| 35 | GO:0032877: positive regulation of DNA endoreduplication | 7.83E-04 |
| 36 | GO:0019722: calcium-mediated signaling | 8.29E-04 |
| 37 | GO:0016117: carotenoid biosynthetic process | 8.94E-04 |
| 38 | GO:0006021: inositol biosynthetic process | 1.04E-03 |
| 39 | GO:0009694: jasmonic acid metabolic process | 1.04E-03 |
| 40 | GO:0048442: sepal development | 1.04E-03 |
| 41 | GO:0009765: photosynthesis, light harvesting | 1.04E-03 |
| 42 | GO:0072488: ammonium transmembrane transport | 1.04E-03 |
| 43 | GO:0051726: regulation of cell cycle | 1.08E-03 |
| 44 | GO:0071554: cell wall organization or biogenesis | 1.27E-03 |
| 45 | GO:0016120: carotene biosynthetic process | 1.31E-03 |
| 46 | GO:0016123: xanthophyll biosynthetic process | 1.31E-03 |
| 47 | GO:0016094: polyprenol biosynthetic process | 1.31E-03 |
| 48 | GO:0019408: dolichol biosynthetic process | 1.31E-03 |
| 49 | GO:0000060: protein import into nucleus, translocation | 1.61E-03 |
| 50 | GO:0009635: response to herbicide | 1.61E-03 |
| 51 | GO:0050665: hydrogen peroxide biosynthetic process | 1.61E-03 |
| 52 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.61E-03 |
| 53 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.61E-03 |
| 54 | GO:0006559: L-phenylalanine catabolic process | 1.61E-03 |
| 55 | GO:0007267: cell-cell signaling | 1.62E-03 |
| 56 | GO:0045926: negative regulation of growth | 1.93E-03 |
| 57 | GO:0017148: negative regulation of translation | 1.93E-03 |
| 58 | GO:0009854: oxidative photosynthetic carbon pathway | 1.93E-03 |
| 59 | GO:0010077: maintenance of inflorescence meristem identity | 1.93E-03 |
| 60 | GO:0042128: nitrate assimilation | 2.02E-03 |
| 61 | GO:0048573: photoperiodism, flowering | 2.13E-03 |
| 62 | GO:0050829: defense response to Gram-negative bacterium | 2.27E-03 |
| 63 | GO:0009813: flavonoid biosynthetic process | 2.47E-03 |
| 64 | GO:0016559: peroxisome fission | 2.63E-03 |
| 65 | GO:0010119: regulation of stomatal movement | 2.72E-03 |
| 66 | GO:0006002: fructose 6-phosphate metabolic process | 3.00E-03 |
| 67 | GO:0022900: electron transport chain | 3.00E-03 |
| 68 | GO:0009638: phototropism | 3.81E-03 |
| 69 | GO:0042546: cell wall biogenesis | 3.98E-03 |
| 70 | GO:0007049: cell cycle | 3.99E-03 |
| 71 | GO:0048441: petal development | 4.23E-03 |
| 72 | GO:0010192: mucilage biosynthetic process | 4.23E-03 |
| 73 | GO:0051555: flavonol biosynthetic process | 4.23E-03 |
| 74 | GO:0000165: MAPK cascade | 4.63E-03 |
| 75 | GO:0009698: phenylpropanoid metabolic process | 4.67E-03 |
| 76 | GO:0010582: floral meristem determinacy | 5.13E-03 |
| 77 | GO:0015706: nitrate transport | 5.13E-03 |
| 78 | GO:0016925: protein sumoylation | 5.13E-03 |
| 79 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.13E-03 |
| 80 | GO:0006810: transport | 5.20E-03 |
| 81 | GO:0006094: gluconeogenesis | 5.60E-03 |
| 82 | GO:0005986: sucrose biosynthetic process | 5.60E-03 |
| 83 | GO:0019253: reductive pentose-phosphate cycle | 6.09E-03 |
| 84 | GO:0010223: secondary shoot formation | 6.09E-03 |
| 85 | GO:0009934: regulation of meristem structural organization | 6.09E-03 |
| 86 | GO:0010143: cutin biosynthetic process | 6.09E-03 |
| 87 | GO:0048440: carpel development | 6.09E-03 |
| 88 | GO:0009225: nucleotide-sugar metabolic process | 6.59E-03 |
| 89 | GO:0007031: peroxisome organization | 6.59E-03 |
| 90 | GO:0010167: response to nitrate | 6.59E-03 |
| 91 | GO:0005985: sucrose metabolic process | 6.59E-03 |
| 92 | GO:0009833: plant-type primary cell wall biogenesis | 7.10E-03 |
| 93 | GO:0006833: water transport | 7.10E-03 |
| 94 | GO:0042545: cell wall modification | 7.11E-03 |
| 95 | GO:0006487: protein N-linked glycosylation | 7.63E-03 |
| 96 | GO:0009742: brassinosteroid mediated signaling pathway | 7.76E-03 |
| 97 | GO:0009695: jasmonic acid biosynthetic process | 8.18E-03 |
| 98 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.18E-03 |
| 99 | GO:0031408: oxylipin biosynthetic process | 8.73E-03 |
| 100 | GO:0006366: transcription from RNA polymerase II promoter | 8.73E-03 |
| 101 | GO:0051260: protein homooligomerization | 8.73E-03 |
| 102 | GO:0006730: one-carbon metabolic process | 9.30E-03 |
| 103 | GO:0010017: red or far-red light signaling pathway | 9.30E-03 |
| 104 | GO:0009414: response to water deprivation | 9.90E-03 |
| 105 | GO:0010584: pollen exine formation | 1.05E-02 |
| 106 | GO:0048443: stamen development | 1.05E-02 |
| 107 | GO:0042335: cuticle development | 1.17E-02 |
| 108 | GO:0034220: ion transmembrane transport | 1.17E-02 |
| 109 | GO:0015991: ATP hydrolysis coupled proton transport | 1.17E-02 |
| 110 | GO:0009958: positive gravitropism | 1.24E-02 |
| 111 | GO:0006520: cellular amino acid metabolic process | 1.24E-02 |
| 112 | GO:0009741: response to brassinosteroid | 1.24E-02 |
| 113 | GO:0045489: pectin biosynthetic process | 1.24E-02 |
| 114 | GO:0045490: pectin catabolic process | 1.27E-02 |
| 115 | GO:0015986: ATP synthesis coupled proton transport | 1.30E-02 |
| 116 | GO:0007059: chromosome segregation | 1.30E-02 |
| 117 | GO:0019252: starch biosynthetic process | 1.37E-02 |
| 118 | GO:0008654: phospholipid biosynthetic process | 1.37E-02 |
| 119 | GO:0009791: post-embryonic development | 1.37E-02 |
| 120 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.43E-02 |
| 121 | GO:0010583: response to cyclopentenone | 1.50E-02 |
| 122 | GO:0019761: glucosinolate biosynthetic process | 1.50E-02 |
| 123 | GO:0007264: small GTPase mediated signal transduction | 1.50E-02 |
| 124 | GO:1901657: glycosyl compound metabolic process | 1.57E-02 |
| 125 | GO:0051301: cell division | 1.73E-02 |
| 126 | GO:0051607: defense response to virus | 1.79E-02 |
| 127 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 1.82E-02 |
| 128 | GO:0009911: positive regulation of flower development | 1.86E-02 |
| 129 | GO:0005975: carbohydrate metabolic process | 1.92E-02 |
| 130 | GO:0016311: dephosphorylation | 2.17E-02 |
| 131 | GO:0030244: cellulose biosynthetic process | 2.25E-02 |
| 132 | GO:0018298: protein-chromophore linkage | 2.25E-02 |
| 133 | GO:0009832: plant-type cell wall biogenesis | 2.33E-02 |
| 134 | GO:0009407: toxin catabolic process | 2.41E-02 |
| 135 | GO:0009867: jasmonic acid mediated signaling pathway | 2.66E-02 |
| 136 | GO:0016051: carbohydrate biosynthetic process | 2.66E-02 |
| 137 | GO:0009637: response to blue light | 2.66E-02 |
| 138 | GO:0006839: mitochondrial transport | 2.92E-02 |
| 139 | GO:0009926: auxin polar transport | 3.19E-02 |
| 140 | GO:0009636: response to toxic substance | 3.47E-02 |
| 141 | GO:0006629: lipid metabolic process | 3.60E-02 |
| 142 | GO:0006260: DNA replication | 3.65E-02 |
| 143 | GO:0031347: regulation of defense response | 3.65E-02 |
| 144 | GO:0042742: defense response to bacterium | 3.75E-02 |
| 145 | GO:0009585: red, far-red light phototransduction | 3.94E-02 |
| 146 | GO:0009809: lignin biosynthetic process | 3.94E-02 |
| 147 | GO:0006486: protein glycosylation | 3.94E-02 |
| 148 | GO:0008152: metabolic process | 3.96E-02 |
| 149 | GO:0010224: response to UV-B | 4.04E-02 |
| 150 | GO:0030154: cell differentiation | 4.16E-02 |
| 151 | GO:0009909: regulation of flower development | 4.24E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 2 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 3 | GO:0033961: cis-stilbene-oxide hydrolase activity | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0030795: jasmonate O-methyltransferase activity | 0.00E+00 |
| 6 | GO:0102078: methyl jasmonate methylesterase activity | 0.00E+00 |
| 7 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 8 | GO:1990055: phenylacetaldehyde synthase activity | 0.00E+00 |
| 9 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 10 | GO:0045430: chalcone isomerase activity | 1.71E-05 |
| 11 | GO:0008429: phosphatidylethanolamine binding | 4.18E-05 |
| 12 | GO:0016161: beta-amylase activity | 5.87E-05 |
| 13 | GO:0010313: phytochrome binding | 1.46E-04 |
| 14 | GO:0090448: glucosinolate:proton symporter activity | 1.46E-04 |
| 15 | GO:0004837: tyrosine decarboxylase activity | 1.46E-04 |
| 16 | GO:0004860: protein kinase inhibitor activity | 2.59E-04 |
| 17 | GO:0004512: inositol-3-phosphate synthase activity | 3.33E-04 |
| 18 | GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity | 3.33E-04 |
| 19 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.33E-04 |
| 20 | GO:0010291: carotene beta-ring hydroxylase activity | 3.33E-04 |
| 21 | GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | 3.33E-04 |
| 22 | GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity | 3.33E-04 |
| 23 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.33E-04 |
| 24 | GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity | 3.33E-04 |
| 25 | GO:0000064: L-ornithine transmembrane transporter activity | 3.33E-04 |
| 26 | GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity | 5.47E-04 |
| 27 | GO:0016757: transferase activity, transferring glycosyl groups | 7.34E-04 |
| 28 | GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity | 7.83E-04 |
| 29 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 7.83E-04 |
| 30 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 7.83E-04 |
| 31 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 7.83E-04 |
| 32 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 7.83E-04 |
| 33 | GO:0048027: mRNA 5'-UTR binding | 7.83E-04 |
| 34 | GO:0005215: transporter activity | 8.11E-04 |
| 35 | GO:0098599: palmitoyl hydrolase activity | 1.04E-03 |
| 36 | GO:0046527: glucosyltransferase activity | 1.04E-03 |
| 37 | GO:0050378: UDP-glucuronate 4-epimerase activity | 1.04E-03 |
| 38 | GO:0008891: glycolate oxidase activity | 1.04E-03 |
| 39 | GO:0004301: epoxide hydrolase activity | 1.04E-03 |
| 40 | GO:0080032: methyl jasmonate esterase activity | 1.04E-03 |
| 41 | GO:0019901: protein kinase binding | 1.19E-03 |
| 42 | GO:0002094: polyprenyltransferase activity | 1.31E-03 |
| 43 | GO:0031386: protein tag | 1.31E-03 |
| 44 | GO:0045547: dehydrodolichyl diphosphate synthase activity | 1.31E-03 |
| 45 | GO:0016759: cellulose synthase activity | 1.53E-03 |
| 46 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.61E-03 |
| 47 | GO:0102229: amylopectin maltohydrolase activity | 1.61E-03 |
| 48 | GO:0042578: phosphoric ester hydrolase activity | 1.61E-03 |
| 49 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.61E-03 |
| 50 | GO:0008519: ammonium transmembrane transporter activity | 1.61E-03 |
| 51 | GO:0080030: methyl indole-3-acetate esterase activity | 1.61E-03 |
| 52 | GO:0008474: palmitoyl-(protein) hydrolase activity | 1.61E-03 |
| 53 | GO:0016413: O-acetyltransferase activity | 1.71E-03 |
| 54 | GO:0043295: glutathione binding | 2.27E-03 |
| 55 | GO:0016621: cinnamoyl-CoA reductase activity | 2.27E-03 |
| 56 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.60E-03 |
| 57 | GO:0003824: catalytic activity | 3.12E-03 |
| 58 | GO:0016207: 4-coumarate-CoA ligase activity | 3.40E-03 |
| 59 | GO:0015112: nitrate transmembrane transporter activity | 3.81E-03 |
| 60 | GO:0004575: sucrose alpha-glucosidase activity | 3.81E-03 |
| 61 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 4.67E-03 |
| 62 | GO:0047372: acylglycerol lipase activity | 4.67E-03 |
| 63 | GO:0004089: carbonate dehydratase activity | 5.60E-03 |
| 64 | GO:0045330: aspartyl esterase activity | 5.70E-03 |
| 65 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.09E-03 |
| 66 | GO:0051119: sugar transmembrane transporter activity | 6.59E-03 |
| 67 | GO:0030599: pectinesterase activity | 6.89E-03 |
| 68 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 7.10E-03 |
| 69 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 7.10E-03 |
| 70 | GO:0031409: pigment binding | 7.10E-03 |
| 71 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 7.10E-03 |
| 72 | GO:0016746: transferase activity, transferring acyl groups | 7.54E-03 |
| 73 | GO:0001046: core promoter sequence-specific DNA binding | 7.63E-03 |
| 74 | GO:0004176: ATP-dependent peptidase activity | 8.73E-03 |
| 75 | GO:0016760: cellulose synthase (UDP-forming) activity | 9.89E-03 |
| 76 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.04E-02 |
| 77 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 1.05E-02 |
| 78 | GO:0046910: pectinesterase inhibitor activity | 1.18E-02 |
| 79 | GO:0010181: FMN binding | 1.30E-02 |
| 80 | GO:0004518: nuclease activity | 1.50E-02 |
| 81 | GO:0016791: phosphatase activity | 1.64E-02 |
| 82 | GO:0008237: metallopeptidase activity | 1.72E-02 |
| 83 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.72E-02 |
| 84 | GO:0015250: water channel activity | 1.86E-02 |
| 85 | GO:0046982: protein heterodimerization activity | 1.93E-02 |
| 86 | GO:0016168: chlorophyll binding | 1.94E-02 |
| 87 | GO:0008375: acetylglucosaminyltransferase activity | 2.01E-02 |
| 88 | GO:0016788: hydrolase activity, acting on ester bonds | 2.01E-02 |
| 89 | GO:0030247: polysaccharide binding | 2.09E-02 |
| 90 | GO:0102483: scopolin beta-glucosidase activity | 2.09E-02 |
| 91 | GO:0004222: metalloendopeptidase activity | 2.41E-02 |
| 92 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.49E-02 |
| 93 | GO:0003993: acid phosphatase activity | 2.75E-02 |
| 94 | GO:0008422: beta-glucosidase activity | 2.83E-02 |
| 95 | GO:0050661: NADP binding | 2.92E-02 |
| 96 | GO:0004871: signal transducer activity | 3.06E-02 |
| 97 | GO:0004364: glutathione transferase activity | 3.10E-02 |
| 98 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.37E-02 |
| 99 | GO:0015293: symporter activity | 3.47E-02 |
| 100 | GO:0004650: polygalacturonase activity | 4.75E-02 |
| 101 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.75E-02 |
| 102 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.75E-02 |
| 103 | GO:0016874: ligase activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097708: intracellular vesicle | 0.00E+00 |
| 2 | GO:0005971: ribonucleoside-diphosphate reductase complex | 1.46E-04 |
| 3 | GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain | 3.33E-04 |
| 4 | GO:0009509: chromoplast | 5.47E-04 |
| 5 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 5.47E-04 |
| 6 | GO:0005775: vacuolar lumen | 7.83E-04 |
| 7 | GO:0005794: Golgi apparatus | 1.09E-03 |
| 8 | GO:0071944: cell periphery | 1.44E-03 |
| 9 | GO:0031225: anchored component of membrane | 1.67E-03 |
| 10 | GO:0016021: integral component of membrane | 2.27E-03 |
| 11 | GO:0046658: anchored component of plasma membrane | 2.85E-03 |
| 12 | GO:0005779: integral component of peroxisomal membrane | 3.00E-03 |
| 13 | GO:0009505: plant-type cell wall | 3.94E-03 |
| 14 | GO:0005783: endoplasmic reticulum | 4.06E-03 |
| 15 | GO:0048471: perinuclear region of cytoplasm | 4.67E-03 |
| 16 | GO:0005765: lysosomal membrane | 4.67E-03 |
| 17 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 6.59E-03 |
| 18 | GO:0030076: light-harvesting complex | 6.59E-03 |
| 19 | GO:0005886: plasma membrane | 7.29E-03 |
| 20 | GO:0009506: plasmodesma | 7.31E-03 |
| 21 | GO:0009507: chloroplast | 1.05E-02 |
| 22 | GO:0005887: integral component of plasma membrane | 1.10E-02 |
| 23 | GO:0009522: photosystem I | 1.30E-02 |
| 24 | GO:0009523: photosystem II | 1.37E-02 |
| 25 | GO:0000139: Golgi membrane | 1.62E-02 |
| 26 | GO:0032580: Golgi cisterna membrane | 1.64E-02 |
| 27 | GO:0005778: peroxisomal membrane | 1.72E-02 |
| 28 | GO:0000325: plant-type vacuole | 2.49E-02 |
| 29 | GO:0016020: membrane | 2.83E-02 |
| 30 | GO:0005819: spindle | 2.83E-02 |
| 31 | GO:0031902: late endosome membrane | 3.01E-02 |
| 32 | GO:0005743: mitochondrial inner membrane | 3.35E-02 |