GO Enrichment Analysis of Co-expressed Genes with
AT3G29230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901259: chloroplast rRNA processing | 6.21E-07 |
| 2 | GO:0008616: queuosine biosynthetic process | 2.38E-05 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 5.62E-05 |
| 4 | GO:0010239: chloroplast mRNA processing | 6.64E-05 |
| 5 | GO:0007094: mitotic spindle assembly checkpoint | 1.21E-04 |
| 6 | GO:0009959: negative gravitropism | 1.52E-04 |
| 7 | GO:0048564: photosystem I assembly | 2.54E-04 |
| 8 | GO:0045292: mRNA cis splicing, via spliceosome | 2.54E-04 |
| 9 | GO:0006353: DNA-templated transcription, termination | 2.54E-04 |
| 10 | GO:0022900: electron transport chain | 2.91E-04 |
| 11 | GO:0000373: Group II intron splicing | 3.29E-04 |
| 12 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.67E-04 |
| 13 | GO:0031425: chloroplast RNA processing | 3.67E-04 |
| 14 | GO:0009451: RNA modification | 3.91E-04 |
| 15 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.07E-04 |
| 16 | GO:0051321: meiotic cell cycle | 8.05E-04 |
| 17 | GO:0030245: cellulose catabolic process | 8.54E-04 |
| 18 | GO:0007059: chromosome segregation | 1.16E-03 |
| 19 | GO:0009639: response to red or far red light | 1.43E-03 |
| 20 | GO:0009058: biosynthetic process | 5.01E-03 |
| 21 | GO:0015979: photosynthesis | 1.04E-02 |
| 22 | GO:0045454: cell redox homeostasis | 1.08E-02 |
| 23 | GO:0006508: proteolysis | 1.10E-02 |
| 24 | GO:0032259: methylation | 1.21E-02 |
| 25 | GO:0006397: mRNA processing | 1.29E-02 |
| 26 | GO:0009735: response to cytokinin | 1.76E-02 |
| 27 | GO:0051301: cell division | 1.99E-02 |
| 28 | GO:0071555: cell wall organization | 3.10E-02 |
| 29 | GO:0042742: defense response to bacterium | 3.10E-02 |
| 30 | GO:0015031: protein transport | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 2 | GO:0016851: magnesium chelatase activity | 7.77E-08 |
| 3 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 8.86E-06 |
| 4 | GO:0008479: queuine tRNA-ribosyltransferase activity | 2.38E-05 |
| 5 | GO:0008810: cellulase activity | 9.02E-04 |
| 6 | GO:0003723: RNA binding | 9.05E-04 |
| 7 | GO:0004519: endonuclease activity | 1.12E-03 |
| 8 | GO:0008483: transaminase activity | 1.49E-03 |
| 9 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.81E-03 |
| 10 | GO:0043621: protein self-association | 2.81E-03 |
| 11 | GO:0019843: rRNA binding | 4.83E-03 |
| 12 | GO:0030170: pyridoxal phosphate binding | 5.19E-03 |
| 13 | GO:0008168: methyltransferase activity | 7.95E-03 |
| 14 | GO:0009055: electron carrier activity | 1.31E-02 |
| 15 | GO:0016887: ATPase activity | 1.70E-02 |
| 16 | GO:0000166: nucleotide binding | 1.88E-02 |
| 17 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.29E-02 |
| 18 | GO:0030246: carbohydrate binding | 2.32E-02 |
| 19 | GO:0005507: copper ion binding | 2.41E-02 |
| 20 | GO:0003824: catalytic activity | 3.31E-02 |
| 21 | GO:0003729: mRNA binding | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 7.27E-06 |
| 2 | GO:0009507: chloroplast | 1.58E-05 |
| 3 | GO:0010007: magnesium chelatase complex | 4.33E-05 |
| 4 | GO:0005828: kinetochore microtubule | 9.27E-05 |
| 5 | GO:0000776: kinetochore | 1.21E-04 |
| 6 | GO:0000777: condensed chromosome kinetochore | 1.85E-04 |
| 7 | GO:0005876: spindle microtubule | 3.67E-04 |
| 8 | GO:0043231: intracellular membrane-bounded organelle | 1.14E-03 |
| 9 | GO:0030529: intracellular ribonucleoprotein complex | 1.61E-03 |
| 10 | GO:0009579: thylakoid | 2.14E-03 |
| 11 | GO:0009941: chloroplast envelope | 2.74E-03 |
| 12 | GO:0009706: chloroplast inner membrane | 4.15E-03 |
| 13 | GO:0009524: phragmoplast | 5.01E-03 |
| 14 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 8.70E-03 |
| 15 | GO:0009534: chloroplast thylakoid | 2.14E-02 |
| 16 | GO:0009505: plant-type cell wall | 3.64E-02 |