co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G29170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015690: aluminum cation transport	0.00E+00
2	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
3	GO:0010360: negative regulation of anion channel activity	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0009617: response to bacterium	2.09E-07
6	GO:0010120: camalexin biosynthetic process	2.21E-06
7	GO:0009682: induced systemic resistance	7.41E-06
8	GO:0052544: defense response by callose deposition in cell wall	7.41E-06
9	GO:0050832: defense response to fungus	3.81E-05
10	GO:0071456: cellular response to hypoxia	4.06E-05
11	GO:0009759: indole glucosinolate biosynthetic process	4.59E-05
12	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.59E-05
13	GO:0071586: CAAX-box protein processing	1.54E-04
14	GO:0051245: negative regulation of cellular defense response	1.54E-04
15	GO:0080173: male-female gamete recognition during double fertilization	1.54E-04
16	GO:0006481: C-terminal protein methylation	1.54E-04
17	GO:0033306: phytol metabolic process	1.54E-04
18	GO:0009700: indole phytoalexin biosynthetic process	1.54E-04
19	GO:1902361: mitochondrial pyruvate transmembrane transport	1.54E-04
20	GO:0080120: CAAX-box protein maturation	1.54E-04
21	GO:0010112: regulation of systemic acquired resistance	1.70E-04
22	GO:0006032: chitin catabolic process	2.40E-04
23	GO:0043069: negative regulation of programmed cell death	2.40E-04
24	GO:0006468: protein phosphorylation	2.77E-04
25	GO:0019521: D-gluconate metabolic process	3.51E-04
26	GO:0006850: mitochondrial pyruvate transport	3.51E-04
27	GO:0019441: tryptophan catabolic process to kynurenine	3.51E-04
28	GO:0009156: ribonucleoside monophosphate biosynthetic process	3.51E-04
29	GO:0000162: tryptophan biosynthetic process	5.19E-04
30	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	5.75E-04
31	GO:0048281: inflorescence morphogenesis	5.75E-04
32	GO:0010498: proteasomal protein catabolic process	5.75E-04
33	GO:0010359: regulation of anion channel activity	5.75E-04
34	GO:0016998: cell wall macromolecule catabolic process	6.92E-04
35	GO:0030433: ubiquitin-dependent ERAD pathway	7.56E-04
36	GO:0006612: protein targeting to membrane	8.23E-04
37	GO:0010255: glucose mediated signaling pathway	8.23E-04
38	GO:0010116: positive regulation of abscisic acid biosynthetic process	8.23E-04
39	GO:0009625: response to insect	8.23E-04
40	GO:0019438: aromatic compound biosynthetic process	8.23E-04
41	GO:0009737: response to abscisic acid	1.01E-03
42	GO:0046345: abscisic acid catabolic process	1.09E-03
43	GO:0010363: regulation of plant-type hypersensitive response	1.09E-03
44	GO:0080142: regulation of salicylic acid biosynthetic process	1.09E-03
45	GO:0009165: nucleotide biosynthetic process	1.09E-03
46	GO:1901141: regulation of lignin biosynthetic process	1.09E-03
47	GO:0030308: negative regulation of cell growth	1.38E-03
48	GO:0009697: salicylic acid biosynthetic process	1.38E-03
49	GO:0055114: oxidation-reduction process	1.40E-03
50	GO:1902456: regulation of stomatal opening	1.70E-03
51	GO:0006561: proline biosynthetic process	1.70E-03
52	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.03E-03
53	GO:0009816: defense response to bacterium, incompatible interaction	2.07E-03
54	GO:1900056: negative regulation of leaf senescence	2.39E-03
55	GO:1902074: response to salt	2.39E-03
56	GO:0007166: cell surface receptor signaling pathway	2.61E-03
57	GO:0009061: anaerobic respiration	2.77E-03
58	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.77E-03
59	GO:2000070: regulation of response to water deprivation	2.77E-03
60	GO:0010119: regulation of stomatal movement	2.93E-03
61	GO:0006979: response to oxidative stress	3.08E-03
62	GO:0009699: phenylpropanoid biosynthetic process	3.16E-03
63	GO:0009657: plastid organization	3.16E-03
64	GO:0043562: cellular response to nitrogen levels	3.16E-03
65	GO:0009808: lignin metabolic process	3.16E-03
66	GO:0006098: pentose-phosphate shunt	3.58E-03
67	GO:0019432: triglyceride biosynthetic process	3.58E-03
68	GO:0048268: clathrin coat assembly	4.01E-03
69	GO:0016310: phosphorylation	4.54E-03
70	GO:0009698: phenylpropanoid metabolic process	4.92E-03
71	GO:0000272: polysaccharide catabolic process	4.92E-03
72	GO:0002213: defense response to insect	5.41E-03
73	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.41E-03
74	GO:0046777: protein autophosphorylation	5.48E-03
75	GO:0009718: anthocyanin-containing compound biosynthetic process	5.91E-03
76	GO:0009266: response to temperature stimulus	6.42E-03
77	GO:0006541: glutamine metabolic process	6.42E-03
78	GO:0002237: response to molecule of bacterial origin	6.42E-03
79	GO:0048367: shoot system development	6.78E-03
80	GO:0010053: root epidermal cell differentiation	6.95E-03
81	GO:0042343: indole glucosinolate metabolic process	6.95E-03
82	GO:0070588: calcium ion transmembrane transport	6.95E-03
83	GO:0009116: nucleoside metabolic process	8.05E-03
84	GO:0009863: salicylic acid mediated signaling pathway	8.05E-03
85	GO:0080147: root hair cell development	8.05E-03
86	GO:0005992: trehalose biosynthetic process	8.05E-03
87	GO:0018105: peptidyl-serine phosphorylation	8.15E-03
88	GO:0048511: rhythmic process	9.22E-03
89	GO:0048278: vesicle docking	9.22E-03
90	GO:0009814: defense response, incompatible interaction	9.82E-03
91	GO:0006012: galactose metabolic process	1.04E-02
92	GO:0010227: floral organ abscission	1.04E-02
93	GO:0042742: defense response to bacterium	1.15E-02
94	GO:0016117: carotenoid biosynthetic process	1.17E-02
95	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.17E-02
96	GO:0070417: cellular response to cold	1.17E-02
97	GO:0000413: protein peptidyl-prolyl isomerization	1.24E-02
98	GO:0010197: polar nucleus fusion	1.31E-02
99	GO:0009646: response to absence of light	1.37E-02
100	GO:0048544: recognition of pollen	1.37E-02
101	GO:0061025: membrane fusion	1.37E-02
102	GO:0009851: auxin biosynthetic process	1.44E-02
103	GO:0006470: protein dephosphorylation	1.57E-02
104	GO:0009630: gravitropism	1.59E-02
105	GO:0009738: abscisic acid-activated signaling pathway	1.64E-02
106	GO:0015031: protein transport	1.66E-02
107	GO:0019760: glucosinolate metabolic process	1.74E-02
108	GO:0035556: intracellular signal transduction	1.83E-02
109	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.05E-02
110	GO:0006906: vesicle fusion	2.13E-02
111	GO:0006950: response to stress	2.21E-02
112	GO:0006970: response to osmotic stress	2.29E-02
113	GO:0009813: flavonoid biosynthetic process	2.46E-02
114	GO:0009651: response to salt stress	2.47E-02
115	GO:0009407: toxin catabolic process	2.55E-02
116	GO:0080167: response to karrikin	2.64E-02
117	GO:0010200: response to chitin	2.73E-02
118	GO:0009867: jasmonic acid mediated signaling pathway	2.81E-02
119	GO:0045087: innate immune response	2.81E-02
120	GO:0006897: endocytosis	3.18E-02
121	GO:0006887: exocytosis	3.18E-02
122	GO:0042542: response to hydrogen peroxide	3.27E-02
123	GO:0009644: response to high light intensity	3.56E-02
124	GO:0009636: response to toxic substance	3.66E-02
125	GO:0032259: methylation	3.72E-02
126	GO:0009846: pollen germination	3.96E-02
127	GO:0042538: hyperosmotic salinity response	3.96E-02
128	GO:0006417: regulation of translation	4.48E-02
129	GO:0009626: plant-type hypersensitive response	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0016301: kinase activity	2.67E-06
5	GO:0005496: steroid binding	3.07E-05
6	GO:0036402: proteasome-activating ATPase activity	4.59E-05
7	GO:0004674: protein serine/threonine kinase activity	5.49E-05
8	GO:0005516: calmodulin binding	8.07E-05
9	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.54E-04
10	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.54E-04
11	GO:0016920: pyroglutamyl-peptidase activity	1.54E-04
12	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.54E-04
13	GO:0004683: calmodulin-dependent protein kinase activity	2.25E-04
14	GO:0004568: chitinase activity	2.40E-04
15	GO:0008171: O-methyltransferase activity	2.40E-04
16	GO:0005524: ATP binding	2.84E-04
17	GO:0003958: NADPH-hemoprotein reductase activity	3.51E-04
18	GO:0038199: ethylene receptor activity	3.51E-04
19	GO:0004061: arylformamidase activity	3.51E-04
20	GO:0017025: TBP-class protein binding	4.65E-04
21	GO:0020037: heme binding	5.22E-04
22	GO:0050833: pyruvate transmembrane transporter activity	5.75E-04
23	GO:0004049: anthranilate synthase activity	5.75E-04
24	GO:0004749: ribose phosphate diphosphokinase activity	8.23E-04
25	GO:0008276: protein methyltransferase activity	8.23E-04
26	GO:0051740: ethylene binding	8.23E-04
27	GO:0004834: tryptophan synthase activity	1.09E-03
28	GO:0009916: alternative oxidase activity	1.09E-03
29	GO:0045431: flavonol synthase activity	1.38E-03
30	GO:0010294: abscisic acid glucosyltransferase activity	1.38E-03
31	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.70E-03
32	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.02E-03
33	GO:0051920: peroxiredoxin activity	2.03E-03
34	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.03E-03
35	GO:0004144: diacylglycerol O-acyltransferase activity	2.03E-03
36	GO:0004656: procollagen-proline 4-dioxygenase activity	2.03E-03
37	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.18E-03
38	GO:0016209: antioxidant activity	2.77E-03
39	GO:0004034: aldose 1-epimerase activity	2.77E-03
40	GO:0004033: aldo-keto reductase (NADP) activity	2.77E-03
41	GO:0003746: translation elongation factor activity	3.21E-03
42	GO:0004364: glutathione transferase activity	3.97E-03
43	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.01E-03
44	GO:0005545: 1-phosphatidylinositol binding	4.46E-03
45	GO:0004713: protein tyrosine kinase activity	4.46E-03
46	GO:0004673: protein histidine kinase activity	4.46E-03
47	GO:0004129: cytochrome-c oxidase activity	4.92E-03
48	GO:0005543: phospholipid binding	4.92E-03
49	GO:0000155: phosphorelay sensor kinase activity	5.91E-03
50	GO:0005388: calcium-transporting ATPase activity	5.91E-03
51	GO:0004175: endopeptidase activity	6.42E-03
52	GO:0008061: chitin binding	6.95E-03
53	GO:0004190: aspartic-type endopeptidase activity	6.95E-03
54	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	6.98E-03
55	GO:0031418: L-ascorbic acid binding	8.05E-03
56	GO:0003954: NADH dehydrogenase activity	8.05E-03
57	GO:0005509: calcium ion binding	1.02E-02
58	GO:0005506: iron ion binding	1.13E-02
59	GO:0030276: clathrin binding	1.31E-02
60	GO:0016853: isomerase activity	1.37E-02
61	GO:0010181: FMN binding	1.37E-02
62	GO:0004872: receptor activity	1.44E-02
63	GO:0008194: UDP-glycosyltransferase activity	1.54E-02
64	GO:0004601: peroxidase activity	2.13E-02
65	GO:0030247: polysaccharide binding	2.21E-02
66	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.29E-02
67	GO:0008236: serine-type peptidase activity	2.29E-02
68	GO:0046872: metal ion binding	2.51E-02
69	GO:0004222: metalloendopeptidase activity	2.55E-02
70	GO:0008233: peptidase activity	2.59E-02
71	GO:0019825: oxygen binding	2.67E-02
72	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.81E-02
73	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.99E-02
74	GO:0000149: SNARE binding	2.99E-02
75	GO:0005484: SNAP receptor activity	3.37E-02
76	GO:0004722: protein serine/threonine phosphatase activity	3.46E-02
77	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.76E-02
78	GO:0009055: electron carrier activity	4.16E-02
79	GO:0016298: lipase activity	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0046862: chromoplast membrane	0.00E+00
3	GO:0005886: plasma membrane	2.90E-07
4	GO:0005783: endoplasmic reticulum	3.31E-07
5	GO:0031597: cytosolic proteasome complex	6.42E-05
6	GO:0031595: nuclear proteasome complex	8.59E-05
7	GO:0008540: proteasome regulatory particle, base subcomplex	2.04E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	3.51E-04
9	GO:0005901: caveola	3.51E-04
10	GO:0005853: eukaryotic translation elongation factor 1 complex	5.75E-04
11	GO:0000502: proteasome complex	7.17E-04
12	GO:0030658: transport vesicle membrane	8.23E-04
13	GO:0016020: membrane	9.52E-04
14	GO:0030660: Golgi-associated vesicle membrane	1.09E-03
15	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.09E-03
16	GO:0005746: mitochondrial respiratory chain	1.38E-03
17	GO:0000164: protein phosphatase type 1 complex	1.38E-03
18	GO:0005789: endoplasmic reticulum membrane	1.78E-03
19	GO:0016021: integral component of membrane	2.12E-03
20	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.77E-03
21	GO:0031305: integral component of mitochondrial inner membrane	2.77E-03
22	GO:0005765: lysosomal membrane	4.92E-03
23	GO:0005829: cytosol	6.14E-03
24	GO:0030176: integral component of endoplasmic reticulum membrane	6.95E-03
25	GO:0005773: vacuole	7.34E-03
26	GO:0070469: respiratory chain	8.63E-03
27	GO:0005905: clathrin-coated pit	9.22E-03
28	GO:0043231: intracellular membrane-bounded organelle	9.35E-03
29	GO:0030136: clathrin-coated vesicle	1.17E-02
30	GO:0032580: Golgi cisterna membrane	1.74E-02
31	GO:0005778: peroxisomal membrane	1.81E-02
32	GO:0046658: anchored component of plasma membrane	1.82E-02
33	GO:0005777: peroxisome	2.04E-02
34	GO:0031225: anchored component of membrane	2.99E-02
35	GO:0031201: SNARE complex	3.18E-02
36	GO:0009535: chloroplast thylakoid membrane	3.81E-02
37	GO:0010008: endosome membrane	4.80E-02