co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G28480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009992: cellular water homeostasis	0.00E+00
2	GO:0080009: mRNA methylation	3.65E-05
3	GO:0009311: oligosaccharide metabolic process	9.94E-05
4	GO:0060548: negative regulation of cell death	1.37E-04
5	GO:0030041: actin filament polymerization	1.78E-04
6	GO:0018279: protein N-linked glycosylation via asparagine	1.78E-04
7	GO:0042773: ATP synthesis coupled electron transport	3.15E-04
8	GO:0006002: fructose 6-phosphate metabolic process	4.16E-04
9	GO:0010053: root epidermal cell differentiation	8.75E-04
10	GO:0009826: unidimensional cell growth	9.45E-04
11	GO:0006874: cellular calcium ion homeostasis	1.07E-03
12	GO:0061077: chaperone-mediated protein folding	1.13E-03
13	GO:0030433: ubiquitin-dependent ERAD pathway	1.20E-03
14	GO:0031348: negative regulation of defense response	1.20E-03
15	GO:0016126: sterol biosynthetic process	2.30E-03
16	GO:0006499: N-terminal protein myristoylation	2.94E-03
17	GO:0009853: photorespiration	3.22E-03
18	GO:0009664: plant-type cell wall organization	4.47E-03
19	GO:0006096: glycolytic process	5.26E-03
20	GO:0009626: plant-type hypersensitive response	5.50E-03
21	GO:0042545: cell wall modification	5.86E-03
22	GO:0042742: defense response to bacterium	6.16E-03
23	GO:0006979: response to oxidative stress	6.20E-03
24	GO:0009742: brassinosteroid mediated signaling pathway	6.22E-03
25	GO:0045490: pectin catabolic process	8.74E-03
26	GO:0007166: cell surface receptor signaling pathway	9.60E-03
27	GO:0009617: response to bacterium	9.90E-03
28	GO:0009793: embryo development ending in seed dormancy	1.43E-02
29	GO:0046777: protein autophosphorylation	1.45E-02
30	GO:0016042: lipid catabolic process	1.79E-02
31	GO:0009751: response to salicylic acid	1.80E-02
32	GO:0008152: metabolic process	1.95E-02
33	GO:0009738: abscisic acid-activated signaling pathway	2.68E-02
34	GO:0009416: response to light stimulus	2.74E-02
35	GO:0006468: protein phosphorylation	4.77E-02
36	GO:0030154: cell differentiation	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0000247: C-8 sterol isomerase activity	0.00E+00
2	GO:0047750: cholestenol delta-isomerase activity	0.00E+00
3	GO:0045309: protein phosphorylated amino acid binding	5.15E-06
4	GO:0019904: protein domain specific binding	7.68E-06
5	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	1.39E-05
6	GO:0004576: oligosaccharyl transferase activity	1.37E-04
7	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.78E-04
8	GO:0003872: 6-phosphofructokinase activity	3.15E-04
9	GO:0004970: ionotropic glutamate receptor activity	8.75E-04
10	GO:0005217: intracellular ligand-gated ion channel activity	8.75E-04
11	GO:0051536: iron-sulfur cluster binding	1.00E-03
12	GO:0003954: NADH dehydrogenase activity	1.00E-03
13	GO:0005528: FK506 binding	1.00E-03
14	GO:0033612: receptor serine/threonine kinase binding	1.13E-03
15	GO:0001085: RNA polymerase II transcription factor binding	1.56E-03
16	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.80E-03
17	GO:0030247: polysaccharide binding	2.57E-03
18	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.66E-03
19	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.03E-03
20	GO:0051539: 4 iron, 4 sulfur cluster binding	3.52E-03
21	GO:0051537: 2 iron, 2 sulfur cluster binding	4.04E-03
22	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.26E-03
23	GO:0031625: ubiquitin protein ligase binding	5.03E-03
24	GO:0045330: aspartyl esterase activity	5.03E-03
25	GO:0045735: nutrient reservoir activity	5.26E-03
26	GO:0030599: pectinesterase activity	5.74E-03
27	GO:0003779: actin binding	5.86E-03
28	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	7.64E-03
29	GO:0046910: pectinesterase inhibitor activity	8.32E-03
30	GO:0008194: UDP-glycosyltransferase activity	9.45E-03
31	GO:0003682: chromatin binding	1.24E-02
32	GO:0009055: electron carrier activity	1.92E-02
33	GO:0016757: transferase activity, transferring glycosyl groups	2.10E-02
34	GO:0005524: ATP binding	2.54E-02
35	GO:0000166: nucleotide binding	2.74E-02
36	GO:0004674: protein serine/threonine kinase activity	3.05E-02
37	GO:0016740: transferase activity	3.16E-02
38	GO:0005509: calcium ion binding	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0036396: MIS complex	0.00E+00
2	GO:0005911: cell-cell junction	1.39E-05
3	GO:0005783: endoplasmic reticulum	4.32E-05
4	GO:0005945: 6-phosphofructokinase complex	1.78E-04
5	GO:0008250: oligosaccharyltransferase complex	1.78E-04
6	GO:0009506: plasmodesma	2.00E-04
7	GO:0005747: mitochondrial respiratory chain complex I	3.27E-04
8	GO:0005794: Golgi apparatus	3.84E-04
9	GO:0005774: vacuolar membrane	6.27E-04
10	GO:0009505: plant-type cell wall	1.05E-03
11	GO:0045271: respiratory chain complex I	1.07E-03
12	GO:0005789: endoplasmic reticulum membrane	1.34E-03
13	GO:0005886: plasma membrane	1.51E-03
14	GO:0071944: cell periphery	1.96E-03
15	GO:0005788: endoplasmic reticulum lumen	2.39E-03
16	GO:0005667: transcription factor complex	2.48E-03
17	GO:0031966: mitochondrial membrane	4.47E-03
18	GO:0005635: nuclear envelope	4.92E-03
19	GO:0016607: nuclear speck	5.38E-03
20	GO:0005773: vacuole	6.44E-03
21	GO:0009543: chloroplast thylakoid lumen	6.99E-03
22	GO:0005623: cell	7.11E-03
23	GO:0005730: nucleolus	1.04E-02
24	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.27E-02
25	GO:0016021: integral component of membrane	1.82E-02
26	GO:0009570: chloroplast stroma	4.05E-02