co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G28200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046520: sphingoid biosynthetic process	2.08E-05
2	GO:0033591: response to L-ascorbic acid	9.50E-05
3	GO:0032502: developmental process	1.07E-04
4	GO:0010583: response to cyclopentenone	1.07E-04
5	GO:2000038: regulation of stomatal complex development	1.95E-04
6	GO:0032876: negative regulation of DNA endoreduplication	2.51E-04
7	GO:0030308: negative regulation of cell growth	2.51E-04
8	GO:0006596: polyamine biosynthetic process	3.11E-04
9	GO:0048759: xylem vessel member cell differentiation	3.11E-04
10	GO:0000741: karyogamy	3.11E-04
11	GO:2000037: regulation of stomatal complex patterning	3.73E-04
12	GO:0030497: fatty acid elongation	4.37E-04
13	GO:0009690: cytokinin metabolic process	5.05E-04
14	GO:0009416: response to light stimulus	6.22E-04
15	GO:0009641: shade avoidance	7.94E-04
16	GO:0000038: very long-chain fatty acid metabolic process	8.71E-04
17	GO:0008361: regulation of cell size	9.50E-04
18	GO:0006833: water transport	1.29E-03
19	GO:0010025: wax biosynthetic process	1.29E-03
20	GO:0009414: response to water deprivation	1.44E-03
21	GO:0007017: microtubule-based process	1.47E-03
22	GO:0006284: base-excision repair	1.86E-03
23	GO:0034220: ion transmembrane transport	2.07E-03
24	GO:0010087: phloem or xylem histogenesis	2.07E-03
25	GO:0042631: cellular response to water deprivation	2.07E-03
26	GO:0042335: cuticle development	2.07E-03
27	GO:0010197: polar nucleus fusion	2.17E-03
28	GO:0045892: negative regulation of transcription, DNA-templated	2.35E-03
29	GO:0071554: cell wall organization or biogenesis	2.50E-03
30	GO:0010090: trichome morphogenesis	2.73E-03
31	GO:0010411: xyloglucan metabolic process	3.58E-03
32	GO:0009926: auxin polar transport	5.37E-03
33	GO:0009640: photomorphogenesis	5.37E-03
34	GO:0042546: cell wall biogenesis	5.52E-03
35	GO:0008643: carbohydrate transport	5.66E-03
36	GO:0042538: hyperosmotic salinity response	6.27E-03
37	GO:0006857: oligopeptide transport	6.91E-03
38	GO:0009742: brassinosteroid mediated signaling pathway	8.77E-03
39	GO:0071555: cell wall organization	1.01E-02
40	GO:0006633: fatty acid biosynthetic process	1.16E-02
41	GO:0040008: regulation of growth	1.20E-02
42	GO:0007623: circadian rhythm	1.24E-02
43	GO:0007166: cell surface receptor signaling pathway	1.36E-02
44	GO:0009409: response to cold	1.38E-02
45	GO:0006810: transport	1.49E-02
46	GO:0005975: carbohydrate metabolic process	1.54E-02
47	GO:0009826: unidimensional cell growth	1.64E-02
48	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.01E-02
49	GO:0007165: signal transduction	2.12E-02
50	GO:0009737: response to abscisic acid	2.17E-02
51	GO:0045454: cell redox homeostasis	2.23E-02
52	GO:0006281: DNA repair	2.59E-02
53	GO:0006629: lipid metabolic process	2.59E-02
54	GO:0006351: transcription, DNA-templated	3.11E-02
55	GO:0045893: positive regulation of transcription, DNA-templated	4.30E-02
56	GO:0055085: transmembrane transport	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0010487: thermospermine synthase activity	0.00E+00
2	GO:0016768: spermine synthase activity	2.08E-05
3	GO:0004328: formamidase activity	2.08E-05
4	GO:0000170: sphingosine hydroxylase activity	2.08E-05
5	GO:0042284: sphingolipid delta-4 desaturase activity	5.37E-05
6	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.42E-04
7	GO:0008725: DNA-3-methyladenine glycosylase activity	2.51E-04
8	GO:0009922: fatty acid elongase activity	2.51E-04
9	GO:0008794: arsenate reductase (glutaredoxin) activity	8.71E-04
10	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.72E-04
11	GO:0008081: phosphoric diester hydrolase activity	1.03E-03
12	GO:0003712: transcription cofactor activity	1.20E-03
13	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.29E-03
14	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.29E-03
15	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.29E-03
16	GO:0008514: organic anion transmembrane transporter activity	1.86E-03
17	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.50E-03
18	GO:0005200: structural constituent of cytoskeleton	2.96E-03
19	GO:0016413: O-acetyltransferase activity	3.08E-03
20	GO:0015250: water channel activity	3.21E-03
21	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.58E-03
22	GO:0051537: 2 iron, 2 sulfur cluster binding	5.66E-03
23	GO:0035091: phosphatidylinositol binding	5.66E-03
24	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.61E-03
25	GO:0004650: polygalacturonase activity	7.90E-03
26	GO:0022857: transmembrane transporter activity	8.07E-03
27	GO:0015035: protein disulfide oxidoreductase activity	8.59E-03
28	GO:0016746: transferase activity, transferring acyl groups	8.59E-03
29	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.08E-02
30	GO:0052689: carboxylic ester hydrolase activity	2.11E-02
31	GO:0042803: protein homodimerization activity	2.31E-02
32	GO:0004871: signal transducer activity	2.31E-02
33	GO:0003924: GTPase activity	2.59E-02
34	GO:0009055: electron carrier activity	2.72E-02

Rank	GO Term	Adjusted P value
1	GO:0045298: tubulin complex	6.45E-04
2	GO:0005578: proteinaceous extracellular matrix	1.03E-03
3	GO:0005576: extracellular region	1.01E-02
4	GO:0005789: endoplasmic reticulum membrane	1.55E-02
5	GO:0005794: Golgi apparatus	1.63E-02
6	GO:0005886: plasma membrane	1.83E-02
7	GO:0005874: microtubule	1.91E-02
8	GO:0016020: membrane	2.87E-02
9	GO:0005887: integral component of plasma membrane	3.22E-02
10	GO:0022626: cytosolic ribosome	3.78E-02
11	GO:0005618: cell wall	4.03E-02
12	GO:0005634: nucleus	4.79E-02