co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G27850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006546: glycine catabolic process	1.08E-06
2	GO:0009735: response to cytokinin	6.46E-06
3	GO:0009767: photosynthetic electron transport chain	3.28E-05
4	GO:0080183: response to photooxidative stress	7.28E-05
5	GO:2000123: positive regulation of stomatal complex development	7.28E-05
6	GO:0006518: peptide metabolic process	1.27E-04
7	GO:0071492: cellular response to UV-A	1.27E-04
8	GO:0006412: translation	2.14E-04
9	GO:0006542: glutamine biosynthetic process	2.57E-04
10	GO:0019676: ammonia assimilation cycle	2.57E-04
11	GO:0071486: cellular response to high light intensity	2.57E-04
12	GO:0019464: glycine decarboxylation via glycine cleavage system	2.57E-04
13	GO:2000038: regulation of stomatal complex development	2.57E-04
14	GO:0010375: stomatal complex patterning	3.30E-04
15	GO:0015979: photosynthesis	3.65E-04
16	GO:0010190: cytochrome b6f complex assembly	4.06E-04
17	GO:0010555: response to mannitol	4.86E-04
18	GO:0009955: adaxial/abaxial pattern specification	4.86E-04
19	GO:1901259: chloroplast rRNA processing	4.86E-04
20	GO:0048564: photosystem I assembly	6.55E-04
21	GO:0009642: response to light intensity	6.55E-04
22	GO:0006810: transport	7.00E-04
23	GO:0032544: plastid translation	7.44E-04
24	GO:0010206: photosystem II repair	8.35E-04
25	GO:0019538: protein metabolic process	1.03E-03
26	GO:0009773: photosynthetic electron transport in photosystem I	1.13E-03
27	GO:0019684: photosynthesis, light reaction	1.13E-03
28	GO:0006636: unsaturated fatty acid biosynthetic process	1.67E-03
29	GO:0019344: cysteine biosynthetic process	1.79E-03
30	GO:0061077: chaperone-mediated protein folding	2.04E-03
31	GO:0042254: ribosome biogenesis	2.38E-03
32	GO:0006284: base-excision repair	2.43E-03
33	GO:0000413: protein peptidyl-prolyl isomerization	2.70E-03
34	GO:0007264: small GTPase mediated signal transduction	3.43E-03
35	GO:0009409: response to cold	3.65E-03
36	GO:0010286: heat acclimation	3.89E-03
37	GO:0007267: cell-cell signaling	3.89E-03
38	GO:0046686: response to cadmium ion	4.36E-03
39	GO:0007568: aging	5.58E-03
40	GO:0009644: response to high light intensity	7.48E-03
41	GO:0042538: hyperosmotic salinity response	8.29E-03
42	GO:0042742: defense response to bacterium	1.53E-02
43	GO:0006633: fatty acid biosynthetic process	1.54E-02
44	GO:0006413: translational initiation	1.56E-02
45	GO:0009658: chloroplast organization	2.24E-02
46	GO:0045454: cell redox homeostasis	2.97E-02
47	GO:0006281: DNA repair	3.45E-02
48	GO:0006508: proteolysis	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0019843: rRNA binding	2.53E-06
2	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.23E-06
3	GO:0003735: structural constituent of ribosome	1.99E-05
4	GO:0042389: omega-3 fatty acid desaturase activity	7.28E-05
5	GO:0004047: aminomethyltransferase activity	7.28E-05
6	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.89E-04
7	GO:0004356: glutamate-ammonia ligase activity	3.30E-04
8	GO:0008725: DNA-3-methyladenine glycosylase activity	3.30E-04
9	GO:0008200: ion channel inhibitor activity	4.06E-04
10	GO:0080030: methyl indole-3-acetate esterase activity	4.06E-04
11	GO:0051920: peroxiredoxin activity	4.86E-04
12	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.66E-04
13	GO:0016209: antioxidant activity	6.55E-04
14	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	7.44E-04
15	GO:0031072: heat shock protein binding	1.34E-03
16	GO:0005528: FK506 binding	1.79E-03
17	GO:0043424: protein histidine kinase binding	1.92E-03
18	GO:0005509: calcium ion binding	2.25E-03
19	GO:0022891: substrate-specific transmembrane transporter activity	2.30E-03
20	GO:0016853: isomerase activity	2.99E-03
21	GO:0019901: protein kinase binding	3.13E-03
22	GO:0008483: transaminase activity	3.89E-03
23	GO:0016168: chlorophyll binding	4.37E-03
24	GO:0008236: serine-type peptidase activity	4.88E-03
25	GO:0004222: metalloendopeptidase activity	5.40E-03
26	GO:0051537: 2 iron, 2 sulfur cluster binding	7.48E-03
27	GO:0016740: transferase activity	9.16E-03
28	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.00E-02
29	GO:0051082: unfolded protein binding	1.12E-02
30	GO:0004252: serine-type endopeptidase activity	1.41E-02
31	GO:0003743: translation initiation factor activity	1.83E-02
32	GO:0004601: peroxidase activity	2.24E-02
33	GO:0016788: hydrolase activity, acting on ester bonds	2.27E-02
34	GO:0003924: GTPase activity	3.45E-02
35	GO:0009055: electron carrier activity	3.62E-02

Rank	GO Term	Adjusted P value
1	GO:0009344: nitrite reductase complex [NAD(P)H]	0.00E+00
2	GO:0009507: chloroplast	3.16E-18
3	GO:0009535: chloroplast thylakoid membrane	9.58E-15
4	GO:0009579: thylakoid	3.50E-13
5	GO:0009543: chloroplast thylakoid lumen	8.91E-12
6	GO:0009570: chloroplast stroma	1.58E-10
7	GO:0031977: thylakoid lumen	3.42E-09
8	GO:0009654: photosystem II oxygen evolving complex	3.86E-09
9	GO:0009941: chloroplast envelope	1.52E-07
10	GO:0030095: chloroplast photosystem II	3.03E-07
11	GO:0019898: extrinsic component of membrane	2.57E-06
12	GO:0009534: chloroplast thylakoid	1.28E-05
13	GO:0005840: ribosome	4.74E-05
14	GO:0042170: plastid membrane	7.28E-05
15	GO:0005960: glycine cleavage complex	1.89E-04
16	GO:0048046: apoplast	5.63E-04
17	GO:0009539: photosystem II reaction center	7.44E-04
18	GO:0005763: mitochondrial small ribosomal subunit	8.35E-04
19	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.35E-04
20	GO:0022626: cytosolic ribosome	9.77E-04
21	GO:0000311: plastid large ribosomal subunit	1.23E-03
22	GO:0000312: plastid small ribosomal subunit	1.45E-03
23	GO:0009532: plastid stroma	2.04E-03
24	GO:0009523: photosystem II	3.13E-03
25	GO:0010319: stromule	3.89E-03
26	GO:0009706: chloroplast inner membrane	1.12E-02