co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G27570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032780: negative regulation of ATPase activity	0.00E+00
2	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
3	GO:0039694: viral RNA genome replication	0.00E+00
4	GO:0046109: uridine biosynthetic process	0.00E+00
5	GO:0035269: protein O-linked mannosylation	0.00E+00
6	GO:0006096: glycolytic process	9.48E-09
7	GO:0046686: response to cadmium ion	3.53E-06
8	GO:0001676: long-chain fatty acid metabolic process	1.08E-05
9	GO:0006631: fatty acid metabolic process	3.86E-05
10	GO:0006511: ubiquitin-dependent protein catabolic process	7.12E-05
11	GO:0009651: response to salt stress	7.33E-05
12	GO:0006506: GPI anchor biosynthetic process	1.18E-04
13	GO:0080120: CAAX-box protein maturation	1.60E-04
14	GO:0071586: CAAX-box protein processing	1.60E-04
15	GO:0019567: arabinose biosynthetic process	1.60E-04
16	GO:0006422: aspartyl-tRNA aminoacylation	1.60E-04
17	GO:0080173: male-female gamete recognition during double fertilization	1.60E-04
18	GO:0033306: phytol metabolic process	1.60E-04
19	GO:0030198: extracellular matrix organization	1.60E-04
20	GO:0051775: response to redox state	1.60E-04
21	GO:0006098: pentose-phosphate shunt	1.80E-04
22	GO:0009156: ribonucleoside monophosphate biosynthetic process	3.65E-04
23	GO:0015914: phospholipid transport	3.65E-04
24	GO:0015824: proline transport	3.65E-04
25	GO:0019521: D-gluconate metabolic process	3.65E-04
26	GO:0031349: positive regulation of defense response	3.65E-04
27	GO:0060919: auxin influx	3.65E-04
28	GO:0006094: gluconeogenesis	3.89E-04
29	GO:0006099: tricarboxylic acid cycle	4.04E-04
30	GO:0009225: nucleotide-sugar metabolic process	4.92E-04
31	GO:0071494: cellular response to UV-C	5.97E-04
32	GO:0002230: positive regulation of defense response to virus by host	5.97E-04
33	GO:0080055: low-affinity nitrate transport	5.97E-04
34	GO:0055114: oxidation-reduction process	7.49E-04
35	GO:0009735: response to cytokinin	8.37E-04
36	GO:0019438: aromatic compound biosynthetic process	8.53E-04
37	GO:0009052: pentose-phosphate shunt, non-oxidative branch	8.53E-04
38	GO:1902290: positive regulation of defense response to oomycetes	8.53E-04
39	GO:0009165: nucleotide biosynthetic process	1.13E-03
40	GO:0006542: glutamine biosynthetic process	1.13E-03
41	GO:0045227: capsule polysaccharide biosynthetic process	1.13E-03
42	GO:0033320: UDP-D-xylose biosynthetic process	1.13E-03
43	GO:0033358: UDP-L-arabinose biosynthetic process	1.13E-03
44	GO:0010363: regulation of plant-type hypersensitive response	1.13E-03
45	GO:0045116: protein neddylation	1.43E-03
46	GO:0030041: actin filament polymerization	1.43E-03
47	GO:0018279: protein N-linked glycosylation via asparagine	1.43E-03
48	GO:0010193: response to ozone	1.44E-03
49	GO:0030163: protein catabolic process	1.63E-03
50	GO:0006014: D-ribose metabolic process	1.76E-03
51	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.76E-03
52	GO:0042732: D-xylose metabolic process	1.76E-03
53	GO:0042176: regulation of protein catabolic process	1.76E-03
54	GO:0010315: auxin efflux	1.76E-03
55	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.76E-03
56	GO:0042026: protein refolding	2.11E-03
57	GO:0006458: 'de novo' protein folding	2.11E-03
58	GO:0009423: chorismate biosynthetic process	2.11E-03
59	GO:0042128: nitrate assimilation	2.30E-03
60	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.48E-03
61	GO:0042773: ATP synthesis coupled electron transport	2.48E-03
62	GO:1900057: positive regulation of leaf senescence	2.48E-03
63	GO:0048767: root hair elongation	2.82E-03
64	GO:0048658: anther wall tapetum development	2.88E-03
65	GO:0006102: isocitrate metabolic process	2.88E-03
66	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.88E-03
67	GO:0009617: response to bacterium	2.96E-03
68	GO:0009734: auxin-activated signaling pathway	3.04E-03
69	GO:0009699: phenylpropanoid biosynthetic process	3.29E-03
70	GO:0009853: photorespiration	3.40E-03
71	GO:0009060: aerobic respiration	3.72E-03
72	GO:0080144: amino acid homeostasis	3.72E-03
73	GO:0019432: triglyceride biosynthetic process	3.72E-03
74	GO:1900426: positive regulation of defense response to bacterium	4.17E-03
75	GO:0018119: peptidyl-cysteine S-nitrosylation	5.12E-03
76	GO:0016485: protein processing	5.12E-03
77	GO:0009073: aromatic amino acid family biosynthetic process	5.12E-03
78	GO:0015706: nitrate transport	5.62E-03
79	GO:0006486: protein glycosylation	5.88E-03
80	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	6.14E-03
81	GO:0010102: lateral root morphogenesis	6.14E-03
82	GO:0006807: nitrogen compound metabolic process	6.14E-03
83	GO:0006006: glucose metabolic process	6.14E-03
84	GO:0010540: basipetal auxin transport	6.67E-03
85	GO:0046688: response to copper ion	7.22E-03
86	GO:0000162: tryptophan biosynthetic process	7.79E-03
87	GO:0034976: response to endoplasmic reticulum stress	7.79E-03
88	GO:0006508: proteolysis	7.88E-03
89	GO:0006487: protein N-linked glycosylation	8.38E-03
90	GO:0009116: nucleoside metabolic process	8.38E-03
91	GO:0006825: copper ion transport	8.97E-03
92	GO:0061077: chaperone-mediated protein folding	9.59E-03
93	GO:0031408: oxylipin biosynthetic process	9.59E-03
94	GO:0007005: mitochondrion organization	1.02E-02
95	GO:0007131: reciprocal meiotic recombination	1.02E-02
96	GO:0030433: ubiquitin-dependent ERAD pathway	1.02E-02
97	GO:0006012: galactose metabolic process	1.09E-02
98	GO:0006817: phosphate ion transport	1.15E-02
99	GO:0009414: response to water deprivation	1.21E-02
100	GO:0009737: response to abscisic acid	1.25E-02
101	GO:0006979: response to oxidative stress	1.27E-02
102	GO:0010501: RNA secondary structure unwinding	1.29E-02
103	GO:0042631: cellular response to water deprivation	1.29E-02
104	GO:0080022: primary root development	1.29E-02
105	GO:0006633: fatty acid biosynthetic process	1.32E-02
106	GO:0071472: cellular response to salt stress	1.36E-02
107	GO:0010154: fruit development	1.36E-02
108	GO:0019252: starch biosynthetic process	1.50E-02
109	GO:0006635: fatty acid beta-oxidation	1.58E-02
110	GO:0080156: mitochondrial mRNA modification	1.58E-02
111	GO:0000302: response to reactive oxygen species	1.58E-02
112	GO:0009630: gravitropism	1.65E-02
113	GO:0007264: small GTPase mediated signal transduction	1.65E-02
114	GO:0010583: response to cyclopentenone	1.65E-02
115	GO:0031047: gene silencing by RNA	1.65E-02
116	GO:0010252: auxin homeostasis	1.81E-02
117	GO:0016579: protein deubiquitination	1.97E-02
118	GO:0009409: response to cold	1.98E-02
119	GO:0006974: cellular response to DNA damage stimulus	2.22E-02
120	GO:0030244: cellulose biosynthetic process	2.47E-02
121	GO:0009832: plant-type cell wall biogenesis	2.56E-02
122	GO:0006499: N-terminal protein myristoylation	2.65E-02
123	GO:0010043: response to zinc ion	2.74E-02
124	GO:0007568: aging	2.74E-02
125	GO:0006865: amino acid transport	2.84E-02
126	GO:0016051: carbohydrate biosynthetic process	2.93E-02
127	GO:0015979: photosynthesis	3.18E-02
128	GO:0045454: cell redox homeostasis	3.34E-02
129	GO:0042542: response to hydrogen peroxide	3.41E-02
130	GO:0009926: auxin polar transport	3.51E-02
131	GO:0009744: response to sucrose	3.51E-02
132	GO:0051707: response to other organism	3.51E-02
133	GO:0000209: protein polyubiquitination	3.61E-02
134	GO:0009965: leaf morphogenesis	3.81E-02
135	GO:0032259: methylation	3.94E-02
136	GO:0016042: lipid catabolic process	3.99E-02
137	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.02E-02
138	GO:0006281: DNA repair	4.11E-02
139	GO:0009408: response to heat	4.11E-02
140	GO:0009664: plant-type cell wall organization	4.12E-02
141	GO:0009793: embryo development ending in seed dormancy	4.33E-02
142	GO:0051603: proteolysis involved in cellular protein catabolic process	4.44E-02
143	GO:0006468: protein phosphorylation	4.49E-02
144	GO:0006857: oligopeptide transport	4.55E-02
145	GO:0048316: seed development	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0005201: extracellular matrix structural constituent	0.00E+00
5	GO:0003856: 3-dehydroquinate synthase activity	0.00E+00
6	GO:0050220: prostaglandin-E synthase activity	0.00E+00
7	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	0.00E+00
8	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
9	GO:0005507: copper ion binding	9.65E-08
10	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.08E-05
11	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.28E-05
12	GO:0004029: aldehyde dehydrogenase (NAD) activity	4.89E-05
13	GO:0005524: ATP binding	6.49E-05
14	GO:0102391: decanoate--CoA ligase activity	6.84E-05
15	GO:0004467: long-chain fatty acid-CoA ligase activity	9.14E-05
16	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.60E-04
17	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.60E-04
18	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.60E-04
19	GO:0004815: aspartate-tRNA ligase activity	1.60E-04
20	GO:0008802: betaine-aldehyde dehydrogenase activity	1.60E-04
21	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.16E-04
22	GO:0008171: O-methyltransferase activity	2.55E-04
23	GO:0004222: metalloendopeptidase activity	3.18E-04
24	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.65E-04
25	GO:0004634: phosphopyruvate hydratase activity	3.65E-04
26	GO:0019781: NEDD8 activating enzyme activity	3.65E-04
27	GO:0004582: dolichyl-phosphate beta-D-mannosyltransferase activity	3.65E-04
28	GO:0004750: ribulose-phosphate 3-epimerase activity	3.65E-04
29	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	3.65E-04
30	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.65E-04
31	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	3.65E-04
32	GO:0048531: beta-1,3-galactosyltransferase activity	3.65E-04
33	GO:0015036: disulfide oxidoreductase activity	3.65E-04
34	GO:0004450: isocitrate dehydrogenase (NADP+) activity	3.65E-04
35	GO:0016805: dipeptidase activity	5.97E-04
36	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.97E-04
37	GO:0004324: ferredoxin-NADP+ reductase activity	5.97E-04
38	GO:0016531: copper chaperone activity	5.97E-04
39	GO:0015193: L-proline transmembrane transporter activity	5.97E-04
40	GO:0004751: ribose-5-phosphate isomerase activity	5.97E-04
41	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	5.97E-04
42	GO:0051287: NAD binding	6.72E-04
43	GO:0000287: magnesium ion binding	7.07E-04
44	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.53E-04
45	GO:0031176: endo-1,4-beta-xylanase activity	8.53E-04
46	GO:0004300: enoyl-CoA hydratase activity	8.53E-04
47	GO:0004749: ribose phosphate diphosphokinase activity	8.53E-04
48	GO:0008276: protein methyltransferase activity	8.53E-04
49	GO:0016656: monodehydroascorbate reductase (NADH) activity	8.53E-04
50	GO:0050373: UDP-arabinose 4-epimerase activity	1.13E-03
51	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.13E-03
52	GO:0010328: auxin influx transmembrane transporter activity	1.13E-03
53	GO:0003995: acyl-CoA dehydrogenase activity	1.13E-03
54	GO:0004356: glutamate-ammonia ligase activity	1.43E-03
55	GO:0008641: small protein activating enzyme activity	1.43E-03
56	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.43E-03
57	GO:0048040: UDP-glucuronate decarboxylase activity	1.76E-03
58	GO:0004332: fructose-bisphosphate aldolase activity	1.76E-03
59	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.76E-03
60	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.76E-03
61	GO:0036402: proteasome-activating ATPase activity	1.76E-03
62	GO:0070403: NAD+ binding	2.11E-03
63	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.11E-03
64	GO:0004747: ribokinase activity	2.11E-03
65	GO:0004144: diacylglycerol O-acyltransferase activity	2.11E-03
66	GO:0003978: UDP-glucose 4-epimerase activity	2.11E-03
67	GO:0008235: metalloexopeptidase activity	2.48E-03
68	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.48E-03
69	GO:0008865: fructokinase activity	2.88E-03
70	GO:0071949: FAD binding	3.72E-03
71	GO:0003678: DNA helicase activity	3.72E-03
72	GO:0050661: NADP binding	3.86E-03
73	GO:0003824: catalytic activity	3.95E-03
74	GO:0030955: potassium ion binding	4.17E-03
75	GO:0004743: pyruvate kinase activity	4.17E-03
76	GO:0030234: enzyme regulator activity	4.64E-03
77	GO:0051537: 2 iron, 2 sulfur cluster binding	4.72E-03
78	GO:0015293: symporter activity	4.90E-03
79	GO:0004177: aminopeptidase activity	5.12E-03
80	GO:0008559: xenobiotic-transporting ATPase activity	5.12E-03
81	GO:0044183: protein binding involved in protein folding	5.12E-03
82	GO:0004129: cytochrome-c oxidase activity	5.12E-03
83	GO:0016491: oxidoreductase activity	5.43E-03
84	GO:0005315: inorganic phosphate transmembrane transporter activity	6.14E-03
85	GO:0015114: phosphate ion transmembrane transporter activity	6.14E-03
86	GO:0010329: auxin efflux transmembrane transporter activity	6.14E-03
87	GO:0004022: alcohol dehydrogenase (NAD) activity	6.14E-03
88	GO:0031624: ubiquitin conjugating enzyme binding	6.67E-03
89	GO:0004175: endopeptidase activity	6.67E-03
90	GO:0017025: TBP-class protein binding	7.22E-03
91	GO:0051082: unfolded protein binding	8.37E-03
92	GO:0051536: iron-sulfur cluster binding	8.38E-03
93	GO:0003954: NADH dehydrogenase activity	8.38E-03
94	GO:0004386: helicase activity	9.13E-03
95	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	9.59E-03
96	GO:0004298: threonine-type endopeptidase activity	9.59E-03
97	GO:0022891: substrate-specific transmembrane transporter activity	1.09E-02
98	GO:0005509: calcium ion binding	1.11E-02
99	GO:0003756: protein disulfide isomerase activity	1.15E-02
100	GO:0050662: coenzyme binding	1.43E-02
101	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.58E-02
102	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.58E-02
103	GO:0008237: metallopeptidase activity	1.89E-02
104	GO:0004674: protein serine/threonine kinase activity	1.95E-02
105	GO:0051213: dioxygenase activity	2.05E-02
106	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.22E-02
107	GO:0004672: protein kinase activity	2.23E-02
108	GO:0004683: calmodulin-dependent protein kinase activity	2.30E-02
109	GO:0004806: triglyceride lipase activity	2.30E-02
110	GO:0004004: ATP-dependent RNA helicase activity	2.30E-02
111	GO:0030247: polysaccharide binding	2.30E-02
112	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.39E-02
113	GO:0050660: flavin adenine dinucleotide binding	2.60E-02
114	GO:0030145: manganese ion binding	2.74E-02
115	GO:0050897: cobalt ion binding	2.74E-02
116	GO:0003746: translation elongation factor activity	2.93E-02
117	GO:0003697: single-stranded DNA binding	2.93E-02
118	GO:0051539: 4 iron, 4 sulfur cluster binding	3.21E-02
119	GO:0043621: protein self-association	3.71E-02
120	GO:0016301: kinase activity	4.06E-02
121	GO:0009055: electron carrier activity	4.40E-02
122	GO:0015171: amino acid transmembrane transporter activity	4.66E-02
123	GO:0045735: nutrient reservoir activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0019822: P4 peroxisome	0.00E+00
3	GO:0005829: cytosol	8.26E-10
4	GO:0000502: proteasome complex	5.09E-09
5	GO:0008541: proteasome regulatory particle, lid subcomplex	9.69E-08
6	GO:0005777: peroxisome	4.60E-07
7	GO:0016020: membrane	6.59E-07
8	GO:0005750: mitochondrial respiratory chain complex III	1.61E-05
9	GO:0005774: vacuolar membrane	1.65E-05
10	GO:0005794: Golgi apparatus	2.39E-05
11	GO:0008250: oligosaccharyltransferase complex	3.28E-05
12	GO:0005886: plasma membrane	3.99E-05
13	GO:0031595: nuclear proteasome complex	9.14E-05
14	GO:0005789: endoplasmic reticulum membrane	1.30E-04
15	GO:0032783: ELL-EAF complex	1.60E-04
16	GO:0005911: cell-cell junction	1.60E-04
17	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	1.60E-04
18	GO:0009506: plasmodesma	2.34E-04
19	GO:0005783: endoplasmic reticulum	2.39E-04
20	GO:0005740: mitochondrial envelope	2.55E-04
21	GO:0000015: phosphopyruvate hydratase complex	3.65E-04
22	GO:0033185: dolichol-phosphate-mannose synthase complex	3.65E-04
23	GO:0005901: caveola	3.65E-04
24	GO:0031314: extrinsic component of mitochondrial inner membrane	3.65E-04
25	GO:0005782: peroxisomal matrix	5.97E-04
26	GO:0005758: mitochondrial intermembrane space	6.05E-04
27	GO:0045271: respiratory chain complex I	6.66E-04
28	GO:0005741: mitochondrial outer membrane	7.30E-04
29	GO:0005746: mitochondrial respiratory chain	1.43E-03
30	GO:0032580: Golgi cisterna membrane	1.74E-03
31	GO:0031597: cytosolic proteasome complex	2.11E-03
32	GO:0009507: chloroplast	2.31E-03
33	GO:0005730: nucleolus	2.45E-03
34	GO:0045273: respiratory chain complex II	2.88E-03
35	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.88E-03
36	GO:0005773: vacuole	2.93E-03
37	GO:0005737: cytoplasm	3.16E-03
38	GO:0009514: glyoxysome	3.29E-03
39	GO:0031902: late endosome membrane	4.03E-03
40	GO:0008540: proteasome regulatory particle, base subcomplex	4.17E-03
41	GO:0009536: plastid	4.80E-03
42	GO:0090404: pollen tube tip	5.12E-03
43	GO:0031966: mitochondrial membrane	5.48E-03
44	GO:0005747: mitochondrial respiratory chain complex I	7.18E-03
45	GO:0030176: integral component of endoplasmic reticulum membrane	7.22E-03
46	GO:0043234: protein complex	7.79E-03
47	GO:0005839: proteasome core complex	9.59E-03
48	GO:0010287: plastoglobule	9.93E-03
49	GO:0009570: chloroplast stroma	1.30E-02
50	GO:0005759: mitochondrial matrix	1.32E-02
51	GO:0005788: endoplasmic reticulum lumen	2.13E-02
52	GO:0000151: ubiquitin ligase complex	2.47E-02
53	GO:0005743: mitochondrial inner membrane	3.82E-02