GO Enrichment Analysis of Co-expressed Genes with
AT3G27280
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0071433: cell wall repair | 0.00E+00 |
| 3 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0006457: protein folding | 2.64E-12 |
| 6 | GO:0046686: response to cadmium ion | 3.12E-10 |
| 7 | GO:0045041: protein import into mitochondrial intermembrane space | 2.06E-07 |
| 8 | GO:0002181: cytoplasmic translation | 7.95E-07 |
| 9 | GO:0009408: response to heat | 1.10E-06 |
| 10 | GO:0006626: protein targeting to mitochondrion | 1.29E-06 |
| 11 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.91E-06 |
| 12 | GO:0051131: chaperone-mediated protein complex assembly | 1.91E-06 |
| 13 | GO:0061077: chaperone-mediated protein folding | 4.17E-06 |
| 14 | GO:0007005: mitochondrion organization | 4.90E-06 |
| 15 | GO:0006412: translation | 1.30E-05 |
| 16 | GO:0016444: somatic cell DNA recombination | 1.38E-05 |
| 17 | GO:0042026: protein refolding | 1.38E-05 |
| 18 | GO:0006458: 'de novo' protein folding | 1.38E-05 |
| 19 | GO:1990542: mitochondrial transmembrane transport | 5.94E-05 |
| 20 | GO:0000494: box C/D snoRNA 3'-end processing | 5.94E-05 |
| 21 | GO:1990258: histone glutamine methylation | 5.94E-05 |
| 22 | GO:0006820: anion transport | 8.25E-05 |
| 23 | GO:0080181: lateral root branching | 1.44E-04 |
| 24 | GO:0010198: synergid death | 1.44E-04 |
| 25 | GO:0051258: protein polymerization | 1.44E-04 |
| 26 | GO:0000027: ribosomal large subunit assembly | 1.58E-04 |
| 27 | GO:0015992: proton transport | 1.94E-04 |
| 28 | GO:0006334: nucleosome assembly | 1.94E-04 |
| 29 | GO:0009553: embryo sac development | 2.07E-04 |
| 30 | GO:0009294: DNA mediated transformation | 2.34E-04 |
| 31 | GO:0045039: protein import into mitochondrial inner membrane | 2.46E-04 |
| 32 | GO:0015695: organic cation transport | 2.46E-04 |
| 33 | GO:0055074: calcium ion homeostasis | 2.46E-04 |
| 34 | GO:0006954: inflammatory response | 2.46E-04 |
| 35 | GO:1902626: assembly of large subunit precursor of preribosome | 2.46E-04 |
| 36 | GO:0010197: polar nucleus fusion | 3.24E-04 |
| 37 | GO:0006166: purine ribonucleoside salvage | 3.57E-04 |
| 38 | GO:0072334: UDP-galactose transmembrane transport | 3.57E-04 |
| 39 | GO:0015696: ammonium transport | 3.57E-04 |
| 40 | GO:0006168: adenine salvage | 3.57E-04 |
| 41 | GO:0009558: embryo sac cellularization | 3.57E-04 |
| 42 | GO:0006986: response to unfolded protein | 3.57E-04 |
| 43 | GO:0072488: ammonium transmembrane transport | 4.78E-04 |
| 44 | GO:0044209: AMP salvage | 6.05E-04 |
| 45 | GO:0006465: signal peptide processing | 6.05E-04 |
| 46 | GO:0031167: rRNA methylation | 6.05E-04 |
| 47 | GO:0006544: glycine metabolic process | 6.05E-04 |
| 48 | GO:0006563: L-serine metabolic process | 7.40E-04 |
| 49 | GO:0010311: lateral root formation | 7.76E-04 |
| 50 | GO:0009955: adaxial/abaxial pattern specification | 8.82E-04 |
| 51 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 8.82E-04 |
| 52 | GO:0009423: chorismate biosynthetic process | 8.82E-04 |
| 53 | GO:0000724: double-strand break repair via homologous recombination | 8.89E-04 |
| 54 | GO:0009690: cytokinin metabolic process | 1.18E-03 |
| 55 | GO:0050821: protein stabilization | 1.18E-03 |
| 56 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.35E-03 |
| 57 | GO:0001510: RNA methylation | 1.35E-03 |
| 58 | GO:0009793: embryo development ending in seed dormancy | 1.35E-03 |
| 59 | GO:0098656: anion transmembrane transport | 1.52E-03 |
| 60 | GO:0006189: 'de novo' IMP biosynthetic process | 1.52E-03 |
| 61 | GO:0006364: rRNA processing | 1.57E-03 |
| 62 | GO:0000387: spliceosomal snRNP assembly | 1.69E-03 |
| 63 | GO:0090332: stomatal closure | 1.69E-03 |
| 64 | GO:0035999: tetrahydrofolate interconversion | 1.69E-03 |
| 65 | GO:0010162: seed dormancy process | 1.88E-03 |
| 66 | GO:0006913: nucleocytoplasmic transport | 2.07E-03 |
| 67 | GO:0009073: aromatic amino acid family biosynthetic process | 2.07E-03 |
| 68 | GO:0009651: response to salt stress | 2.59E-03 |
| 69 | GO:0048467: gynoecium development | 2.68E-03 |
| 70 | GO:0034976: response to endoplasmic reticulum stress | 3.11E-03 |
| 71 | GO:0009116: nucleoside metabolic process | 3.34E-03 |
| 72 | GO:0030150: protein import into mitochondrial matrix | 3.34E-03 |
| 73 | GO:0010187: negative regulation of seed germination | 3.34E-03 |
| 74 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.34E-03 |
| 75 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.05E-03 |
| 76 | GO:0008033: tRNA processing | 5.07E-03 |
| 77 | GO:0000413: protein peptidyl-prolyl isomerization | 5.07E-03 |
| 78 | GO:0048868: pollen tube development | 5.34E-03 |
| 79 | GO:0042254: ribosome biogenesis | 5.98E-03 |
| 80 | GO:0080156: mitochondrial mRNA modification | 6.17E-03 |
| 81 | GO:0009567: double fertilization forming a zygote and endosperm | 7.05E-03 |
| 82 | GO:0010286: heat acclimation | 7.35E-03 |
| 83 | GO:0009816: defense response to bacterium, incompatible interaction | 8.28E-03 |
| 84 | GO:0016049: cell growth | 9.25E-03 |
| 85 | GO:0006811: ion transport | 1.03E-02 |
| 86 | GO:0048527: lateral root development | 1.06E-02 |
| 87 | GO:0048364: root development | 1.12E-02 |
| 88 | GO:0009853: photorespiration | 1.13E-02 |
| 89 | GO:0006810: transport | 1.33E-02 |
| 90 | GO:0008283: cell proliferation | 1.35E-02 |
| 91 | GO:0009735: response to cytokinin | 1.75E-02 |
| 92 | GO:0009555: pollen development | 1.91E-02 |
| 93 | GO:0016569: covalent chromatin modification | 2.06E-02 |
| 94 | GO:0000398: mRNA splicing, via spliceosome | 2.38E-02 |
| 95 | GO:0009058: biosynthetic process | 2.62E-02 |
| 96 | GO:0007623: circadian rhythm | 3.17E-02 |
| 97 | GO:0009617: response to bacterium | 3.60E-02 |
| 98 | GO:0009723: response to ethylene | 4.80E-02 |
| 99 | GO:0048366: leaf development | 4.86E-02 |
| 100 | GO:0015031: protein transport | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 2 | GO:0051082: unfolded protein binding | 3.11E-16 |
| 3 | GO:0003735: structural constituent of ribosome | 1.85E-08 |
| 4 | GO:0005507: copper ion binding | 1.14E-06 |
| 5 | GO:0003729: mRNA binding | 1.32E-05 |
| 6 | GO:0015288: porin activity | 2.51E-05 |
| 7 | GO:0008308: voltage-gated anion channel activity | 3.22E-05 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.00E-05 |
| 9 | GO:0003746: translation elongation factor activity | 5.79E-05 |
| 10 | GO:1990259: histone-glutamine methyltransferase activity | 5.94E-05 |
| 11 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 5.94E-05 |
| 12 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 5.94E-05 |
| 13 | GO:0044183: protein binding involved in protein folding | 7.05E-05 |
| 14 | GO:0031072: heat shock protein binding | 9.56E-05 |
| 15 | GO:0070180: large ribosomal subunit rRNA binding | 2.46E-04 |
| 16 | GO:0008649: rRNA methyltransferase activity | 2.46E-04 |
| 17 | GO:0017077: oxidative phosphorylation uncoupler activity | 3.57E-04 |
| 18 | GO:0003999: adenine phosphoribosyltransferase activity | 3.57E-04 |
| 19 | GO:0005460: UDP-glucose transmembrane transporter activity | 3.57E-04 |
| 20 | GO:0005459: UDP-galactose transmembrane transporter activity | 6.05E-04 |
| 21 | GO:0004372: glycine hydroxymethyltransferase activity | 6.05E-04 |
| 22 | GO:0008519: ammonium transmembrane transporter activity | 7.40E-04 |
| 23 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 7.40E-04 |
| 24 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 7.40E-04 |
| 25 | GO:0030515: snoRNA binding | 1.03E-03 |
| 26 | GO:0042393: histone binding | 1.05E-03 |
| 27 | GO:0008135: translation factor activity, RNA binding | 1.35E-03 |
| 28 | GO:0004129: cytochrome-c oxidase activity | 2.07E-03 |
| 29 | GO:0015266: protein channel activity | 2.47E-03 |
| 30 | GO:0019843: rRNA binding | 2.77E-03 |
| 31 | GO:0030170: pyridoxal phosphate binding | 3.07E-03 |
| 32 | GO:0004407: histone deacetylase activity | 3.34E-03 |
| 33 | GO:0003723: RNA binding | 3.37E-03 |
| 34 | GO:0051087: chaperone binding | 3.57E-03 |
| 35 | GO:0004298: threonine-type endopeptidase activity | 3.81E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 4.55E-03 |
| 37 | GO:0016853: isomerase activity | 5.61E-03 |
| 38 | GO:0010181: FMN binding | 5.61E-03 |
| 39 | GO:0005524: ATP binding | 5.94E-03 |
| 40 | GO:0008233: peptidase activity | 7.14E-03 |
| 41 | GO:0050897: cobalt ion binding | 1.06E-02 |
| 42 | GO:0003924: GTPase activity | 1.07E-02 |
| 43 | GO:0003697: single-stranded DNA binding | 1.13E-02 |
| 44 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.51E-02 |
| 45 | GO:0030246: carbohydrate binding | 2.57E-02 |
| 46 | GO:0008565: protein transporter activity | 2.86E-02 |
| 47 | GO:0005525: GTP binding | 3.14E-02 |
| 48 | GO:0005509: calcium ion binding | 3.57E-02 |
| 49 | GO:0042802: identical protein binding | 3.76E-02 |
| 50 | GO:0003682: chromatin binding | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0005774: vacuolar membrane | 9.17E-11 |
| 4 | GO:0005739: mitochondrion | 5.05E-10 |
| 5 | GO:0005730: nucleolus | 1.35E-07 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 3.89E-07 |
| 7 | GO:0005829: cytosol | 1.02E-06 |
| 8 | GO:0005759: mitochondrial matrix | 1.15E-06 |
| 9 | GO:0015934: large ribosomal subunit | 1.33E-06 |
| 10 | GO:0009506: plasmodesma | 1.87E-06 |
| 11 | GO:0005773: vacuole | 1.39E-05 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 2.87E-05 |
| 13 | GO:0046930: pore complex | 3.22E-05 |
| 14 | GO:0005742: mitochondrial outer membrane translocase complex | 3.22E-05 |
| 15 | GO:0005783: endoplasmic reticulum | 3.73E-05 |
| 16 | GO:0005787: signal peptidase complex | 5.94E-05 |
| 17 | GO:0022626: cytosolic ribosome | 6.69E-05 |
| 18 | GO:0005758: mitochondrial intermembrane space | 1.58E-04 |
| 19 | GO:0005741: mitochondrial outer membrane | 1.94E-04 |
| 20 | GO:0005743: mitochondrial inner membrane | 2.01E-04 |
| 21 | GO:0034719: SMN-Sm protein complex | 2.46E-04 |
| 22 | GO:0005840: ribosome | 3.33E-04 |
| 23 | GO:0005682: U5 snRNP | 4.78E-04 |
| 24 | GO:0005687: U4 snRNP | 6.05E-04 |
| 25 | GO:0097526: spliceosomal tri-snRNP complex | 6.05E-04 |
| 26 | GO:0031428: box C/D snoRNP complex | 7.40E-04 |
| 27 | GO:0030173: integral component of Golgi membrane | 8.82E-04 |
| 28 | GO:0005762: mitochondrial large ribosomal subunit | 8.82E-04 |
| 29 | GO:0005689: U12-type spliceosomal complex | 8.82E-04 |
| 30 | GO:0071004: U2-type prespliceosome | 1.18E-03 |
| 31 | GO:0009507: chloroplast | 1.29E-03 |
| 32 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.35E-03 |
| 33 | GO:0005685: U1 snRNP | 1.52E-03 |
| 34 | GO:0031090: organelle membrane | 1.52E-03 |
| 35 | GO:0071011: precatalytic spliceosome | 1.69E-03 |
| 36 | GO:0015030: Cajal body | 1.69E-03 |
| 37 | GO:0005686: U2 snRNP | 1.88E-03 |
| 38 | GO:0071013: catalytic step 2 spliceosome | 2.07E-03 |
| 39 | GO:0009536: plastid | 2.21E-03 |
| 40 | GO:0032040: small-subunit processome | 2.27E-03 |
| 41 | GO:0019013: viral nucleocapsid | 2.47E-03 |
| 42 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.89E-03 |
| 43 | GO:0005618: cell wall | 3.47E-03 |
| 44 | GO:0005737: cytoplasm | 3.49E-03 |
| 45 | GO:0005839: proteasome core complex | 3.81E-03 |
| 46 | GO:0016592: mediator complex | 6.46E-03 |
| 47 | GO:0009570: chloroplast stroma | 8.34E-03 |
| 48 | GO:0009505: plant-type cell wall | 1.09E-02 |
| 49 | GO:0005886: plasma membrane | 1.16E-02 |
| 50 | GO:0000502: proteasome complex | 1.67E-02 |
| 51 | GO:0005635: nuclear envelope | 1.76E-02 |
| 52 | GO:0005681: spliceosomal complex | 1.88E-02 |
| 53 | GO:0005747: mitochondrial respiratory chain complex I | 1.93E-02 |
| 54 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.29E-02 |
| 55 | GO:0016020: membrane | 2.49E-02 |
| 56 | GO:0022627: cytosolic small ribosomal subunit | 3.87E-02 |