GO Enrichment Analysis of Co-expressed Genes with
AT3G26618
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070478: nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | 0.00E+00 |
| 2 | GO:0060149: negative regulation of posttranscriptional gene silencing | 1.03E-05 |
| 3 | GO:0017006: protein-tetrapyrrole linkage | 1.93E-05 |
| 4 | GO:0009584: detection of visible light | 3.02E-05 |
| 5 | GO:0042273: ribosomal large subunit biogenesis | 4.28E-05 |
| 6 | GO:0016070: RNA metabolic process | 7.20E-05 |
| 7 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 8.84E-05 |
| 8 | GO:0009648: photoperiodism | 8.84E-05 |
| 9 | GO:0009423: chorismate biosynthetic process | 8.84E-05 |
| 10 | GO:0010093: specification of floral organ identity | 1.44E-04 |
| 11 | GO:0010208: pollen wall assembly | 1.44E-04 |
| 12 | GO:0009073: aromatic amino acid family biosynthetic process | 2.27E-04 |
| 13 | GO:0010017: red or far-red light signaling pathway | 4.44E-04 |
| 14 | GO:0000302: response to reactive oxygen species | 6.61E-04 |
| 15 | GO:0018298: protein-chromophore linkage | 9.92E-04 |
| 16 | GO:0006364: rRNA processing | 1.65E-03 |
| 17 | GO:0009585: red, far-red light phototransduction | 1.65E-03 |
| 18 | GO:0009793: embryo development ending in seed dormancy | 2.94E-03 |
| 19 | GO:0009617: response to bacterium | 3.41E-03 |
| 20 | GO:0042254: ribosome biogenesis | 4.12E-03 |
| 21 | GO:0048366: leaf development | 4.54E-03 |
| 22 | GO:0006886: intracellular protein transport | 5.44E-03 |
| 23 | GO:0006397: mRNA processing | 6.33E-03 |
| 24 | GO:0009611: response to wounding | 9.31E-03 |
| 25 | GO:0016310: phosphorylation | 2.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009883: red or far-red light photoreceptor activity | 1.03E-05 |
| 2 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 1.03E-05 |
| 3 | GO:0008020: G-protein coupled photoreceptor activity | 1.93E-05 |
| 4 | GO:0070181: small ribosomal subunit rRNA binding | 1.93E-05 |
| 5 | GO:0009881: photoreceptor activity | 1.06E-04 |
| 6 | GO:0003724: RNA helicase activity | 1.44E-04 |
| 7 | GO:0000155: phosphorelay sensor kinase activity | 2.72E-04 |
| 8 | GO:0003924: GTPase activity | 3.83E-04 |
| 9 | GO:0004004: ATP-dependent RNA helicase activity | 9.29E-04 |
| 10 | GO:0003723: RNA binding | 1.34E-03 |
| 11 | GO:0008026: ATP-dependent helicase activity | 2.18E-03 |
| 12 | GO:0042802: identical protein binding | 3.55E-03 |
| 13 | GO:0042803: protein homodimerization activity | 5.50E-03 |
| 14 | GO:0004871: signal transducer activity | 5.50E-03 |
| 15 | GO:0005525: GTP binding | 1.30E-02 |
| 16 | GO:0005509: calcium ion binding | 1.43E-02 |
| 17 | GO:0003729: mRNA binding | 2.00E-02 |
| 18 | GO:0005515: protein binding | 3.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0055087: Ski complex | 0.00E+00 |
| 2 | GO:0030687: preribosome, large subunit precursor | 1.06E-04 |
| 3 | GO:0034399: nuclear periphery | 1.24E-04 |
| 4 | GO:0005730: nucleolus | 1.92E-04 |
| 5 | GO:0032040: small-subunit processome | 2.49E-04 |
| 6 | GO:0016607: nuclear speck | 1.89E-03 |
| 7 | GO:0005654: nucleoplasm | 2.39E-03 |
| 8 | GO:0031969: chloroplast membrane | 4.71E-03 |
| 9 | GO:0005783: endoplasmic reticulum | 8.83E-03 |
| 10 | GO:0005634: nucleus | 1.17E-02 |
| 11 | GO:0016020: membrane | 1.54E-02 |
| 12 | GO:0009536: plastid | 1.75E-02 |
| 13 | GO:0005774: vacuolar membrane | 3.67E-02 |
| 14 | GO:0009941: chloroplast envelope | 4.56E-02 |