GO Enrichment Analysis of Co-expressed Genes with
AT3G25010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 2 | GO:0006793: phosphorus metabolic process | 0.00E+00 |
| 3 | GO:0051262: protein tetramerization | 8.20E-07 |
| 4 | GO:0006468: protein phosphorylation | 4.75E-06 |
| 5 | GO:0060627: regulation of vesicle-mediated transport | 1.27E-04 |
| 6 | GO:0015760: glucose-6-phosphate transport | 1.27E-04 |
| 7 | GO:1990641: response to iron ion starvation | 1.27E-04 |
| 8 | GO:0009627: systemic acquired resistance | 1.45E-04 |
| 9 | GO:0040008: regulation of growth | 2.05E-04 |
| 10 | GO:0006499: N-terminal protein myristoylation | 2.08E-04 |
| 11 | GO:0090057: root radial pattern formation | 2.94E-04 |
| 12 | GO:0044419: interspecies interaction between organisms | 2.94E-04 |
| 13 | GO:0031349: positive regulation of defense response | 2.94E-04 |
| 14 | GO:0015712: hexose phosphate transport | 2.94E-04 |
| 15 | GO:0006101: citrate metabolic process | 2.94E-04 |
| 16 | GO:0051592: response to calcium ion | 2.94E-04 |
| 17 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 2.94E-04 |
| 18 | GO:0010618: aerenchyma formation | 2.94E-04 |
| 19 | GO:0009617: response to bacterium | 2.96E-04 |
| 20 | GO:0042742: defense response to bacterium | 4.56E-04 |
| 21 | GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway | 4.86E-04 |
| 22 | GO:0015714: phosphoenolpyruvate transport | 4.86E-04 |
| 23 | GO:1900140: regulation of seedling development | 4.86E-04 |
| 24 | GO:0035436: triose phosphate transmembrane transport | 4.86E-04 |
| 25 | GO:0010351: lithium ion transport | 4.86E-04 |
| 26 | GO:0006874: cellular calcium ion homeostasis | 4.91E-04 |
| 27 | GO:0080167: response to karrikin | 6.22E-04 |
| 28 | GO:0009626: plant-type hypersensitive response | 6.91E-04 |
| 29 | GO:0006882: cellular zinc ion homeostasis | 6.95E-04 |
| 30 | GO:0048194: Golgi vesicle budding | 6.95E-04 |
| 31 | GO:0055085: transmembrane transport | 8.47E-04 |
| 32 | GO:0045727: positive regulation of translation | 9.21E-04 |
| 33 | GO:0015713: phosphoglycerate transport | 9.21E-04 |
| 34 | GO:0010109: regulation of photosynthesis | 9.21E-04 |
| 35 | GO:0060548: negative regulation of cell death | 9.21E-04 |
| 36 | GO:0009749: response to glucose | 9.96E-04 |
| 37 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.16E-03 |
| 38 | GO:0045487: gibberellin catabolic process | 1.16E-03 |
| 39 | GO:0000304: response to singlet oxygen | 1.16E-03 |
| 40 | GO:0006097: glyoxylate cycle | 1.16E-03 |
| 41 | GO:0030163: protein catabolic process | 1.20E-03 |
| 42 | GO:0060918: auxin transport | 1.43E-03 |
| 43 | GO:0009643: photosynthetic acclimation | 1.43E-03 |
| 44 | GO:0050665: hydrogen peroxide biosynthetic process | 1.43E-03 |
| 45 | GO:0010942: positive regulation of cell death | 1.43E-03 |
| 46 | GO:0016036: cellular response to phosphate starvation | 1.45E-03 |
| 47 | GO:0006952: defense response | 1.50E-03 |
| 48 | GO:0015977: carbon fixation | 1.71E-03 |
| 49 | GO:0009854: oxidative photosynthetic carbon pathway | 1.71E-03 |
| 50 | GO:0010555: response to mannitol | 1.71E-03 |
| 51 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.71E-03 |
| 52 | GO:2000067: regulation of root morphogenesis | 1.71E-03 |
| 53 | GO:0043090: amino acid import | 2.01E-03 |
| 54 | GO:0030026: cellular manganese ion homeostasis | 2.01E-03 |
| 55 | GO:0009395: phospholipid catabolic process | 2.01E-03 |
| 56 | GO:0009407: toxin catabolic process | 2.17E-03 |
| 57 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.32E-03 |
| 58 | GO:0019375: galactolipid biosynthetic process | 2.32E-03 |
| 59 | GO:0006102: isocitrate metabolic process | 2.32E-03 |
| 60 | GO:0006099: tricarboxylic acid cycle | 2.59E-03 |
| 61 | GO:0022900: electron transport chain | 2.65E-03 |
| 62 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.65E-03 |
| 63 | GO:0007186: G-protein coupled receptor signaling pathway | 2.65E-03 |
| 64 | GO:0010262: somatic embryogenesis | 2.65E-03 |
| 65 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.65E-03 |
| 66 | GO:0010112: regulation of systemic acquired resistance | 3.00E-03 |
| 67 | GO:0042542: response to hydrogen peroxide | 3.06E-03 |
| 68 | GO:0051707: response to other organism | 3.19E-03 |
| 69 | GO:0009744: response to sucrose | 3.19E-03 |
| 70 | GO:0010205: photoinhibition | 3.36E-03 |
| 71 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 3.36E-03 |
| 72 | GO:0009636: response to toxic substance | 3.58E-03 |
| 73 | GO:0010162: seed dormancy process | 3.73E-03 |
| 74 | GO:0006995: cellular response to nitrogen starvation | 3.73E-03 |
| 75 | GO:0055062: phosphate ion homeostasis | 3.73E-03 |
| 76 | GO:0007064: mitotic sister chromatid cohesion | 3.73E-03 |
| 77 | GO:0006032: chitin catabolic process | 3.73E-03 |
| 78 | GO:0009688: abscisic acid biosynthetic process | 3.73E-03 |
| 79 | GO:0031347: regulation of defense response | 3.85E-03 |
| 80 | GO:0006816: calcium ion transport | 4.12E-03 |
| 81 | GO:0000272: polysaccharide catabolic process | 4.12E-03 |
| 82 | GO:0009750: response to fructose | 4.12E-03 |
| 83 | GO:0006508: proteolysis | 4.19E-03 |
| 84 | GO:0006790: sulfur compound metabolic process | 4.52E-03 |
| 85 | GO:0006820: anion transport | 4.52E-03 |
| 86 | GO:0002237: response to molecule of bacterial origin | 5.36E-03 |
| 87 | GO:0042343: indole glucosinolate metabolic process | 5.80E-03 |
| 88 | GO:0070588: calcium ion transmembrane transport | 5.80E-03 |
| 89 | GO:0046854: phosphatidylinositol phosphorylation | 5.80E-03 |
| 90 | GO:0009408: response to heat | 5.91E-03 |
| 91 | GO:0009624: response to nematode | 6.09E-03 |
| 92 | GO:0034976: response to endoplasmic reticulum stress | 6.25E-03 |
| 93 | GO:0009737: response to abscisic acid | 7.18E-03 |
| 94 | GO:0016998: cell wall macromolecule catabolic process | 7.68E-03 |
| 95 | GO:0098542: defense response to other organism | 7.68E-03 |
| 96 | GO:0071456: cellular response to hypoxia | 8.18E-03 |
| 97 | GO:0009686: gibberellin biosynthetic process | 8.69E-03 |
| 98 | GO:0006012: galactose metabolic process | 8.69E-03 |
| 99 | GO:0006817: phosphate ion transport | 9.21E-03 |
| 100 | GO:0008360: regulation of cell shape | 1.09E-02 |
| 101 | GO:0009958: positive gravitropism | 1.09E-02 |
| 102 | GO:0006814: sodium ion transport | 1.14E-02 |
| 103 | GO:0010183: pollen tube guidance | 1.20E-02 |
| 104 | GO:0007166: cell surface receptor signaling pathway | 1.20E-02 |
| 105 | GO:0009409: response to cold | 1.22E-02 |
| 106 | GO:0010193: response to ozone | 1.26E-02 |
| 107 | GO:0000302: response to reactive oxygen species | 1.26E-02 |
| 108 | GO:0009639: response to red or far red light | 1.44E-02 |
| 109 | GO:0001666: response to hypoxia | 1.63E-02 |
| 110 | GO:0016311: dephosphorylation | 1.90E-02 |
| 111 | GO:0016049: cell growth | 1.90E-02 |
| 112 | GO:0008219: cell death | 1.97E-02 |
| 113 | GO:0010200: response to chitin | 2.10E-02 |
| 114 | GO:0006811: ion transport | 2.11E-02 |
| 115 | GO:0010043: response to zinc ion | 2.19E-02 |
| 116 | GO:0044550: secondary metabolite biosynthetic process | 2.21E-02 |
| 117 | GO:0006865: amino acid transport | 2.26E-02 |
| 118 | GO:0015979: photosynthesis | 2.32E-02 |
| 119 | GO:0006839: mitochondrial transport | 2.56E-02 |
| 120 | GO:0010114: response to red light | 2.80E-02 |
| 121 | GO:0032259: methylation | 2.87E-02 |
| 122 | GO:0009751: response to salicylic acid | 2.95E-02 |
| 123 | GO:0009644: response to high light intensity | 2.96E-02 |
| 124 | GO:0006812: cation transport | 3.29E-02 |
| 125 | GO:0009846: pollen germination | 3.29E-02 |
| 126 | GO:0009733: response to auxin | 3.44E-02 |
| 127 | GO:0009734: auxin-activated signaling pathway | 4.21E-02 |
| 128 | GO:0009742: brassinosteroid mediated signaling pathway | 4.63E-02 |
| 129 | GO:0009651: response to salt stress | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990837: sequence-specific double-stranded DNA binding | 0.00E+00 |
| 2 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 3 | GO:0004190: aspartic-type endopeptidase activity | 1.61E-07 |
| 4 | GO:0004674: protein serine/threonine kinase activity | 3.00E-06 |
| 5 | GO:0005524: ATP binding | 1.93E-05 |
| 6 | GO:0005388: calcium-transporting ATPase activity | 2.83E-04 |
| 7 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.83E-04 |
| 8 | GO:0003994: aconitate hydratase activity | 2.94E-04 |
| 9 | GO:0015152: glucose-6-phosphate transmembrane transporter activity | 2.94E-04 |
| 10 | GO:0004338: glucan exo-1,3-beta-glucosidase activity | 2.94E-04 |
| 11 | GO:0045543: gibberellin 2-beta-dioxygenase activity | 2.94E-04 |
| 12 | GO:0016301: kinase activity | 4.83E-04 |
| 13 | GO:0031683: G-protein beta/gamma-subunit complex binding | 4.86E-04 |
| 14 | GO:0008964: phosphoenolpyruvate carboxylase activity | 4.86E-04 |
| 15 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.86E-04 |
| 16 | GO:0071917: triose-phosphate transmembrane transporter activity | 4.86E-04 |
| 17 | GO:0001664: G-protein coupled receptor binding | 4.86E-04 |
| 18 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 6.95E-04 |
| 19 | GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity | 6.95E-04 |
| 20 | GO:0035529: NADH pyrophosphatase activity | 6.95E-04 |
| 21 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 6.95E-04 |
| 22 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 6.95E-04 |
| 23 | GO:0015369: calcium:proton antiporter activity | 9.21E-04 |
| 24 | GO:0008891: glycolate oxidase activity | 9.21E-04 |
| 25 | GO:0015120: phosphoglycerate transmembrane transporter activity | 9.21E-04 |
| 26 | GO:0015368: calcium:cation antiporter activity | 9.21E-04 |
| 27 | GO:0047631: ADP-ribose diphosphatase activity | 1.16E-03 |
| 28 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 1.16E-03 |
| 29 | GO:0000210: NAD+ diphosphatase activity | 1.43E-03 |
| 30 | GO:0016462: pyrophosphatase activity | 1.43E-03 |
| 31 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.71E-03 |
| 32 | GO:0004012: phospholipid-translocating ATPase activity | 1.71E-03 |
| 33 | GO:0003978: UDP-glucose 4-epimerase activity | 1.71E-03 |
| 34 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.71E-03 |
| 35 | GO:0030247: polysaccharide binding | 1.78E-03 |
| 36 | GO:0004427: inorganic diphosphatase activity | 2.01E-03 |
| 37 | GO:0015491: cation:cation antiporter activity | 2.32E-03 |
| 38 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.32E-03 |
| 39 | GO:0015288: porin activity | 2.32E-03 |
| 40 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.65E-03 |
| 41 | GO:0004630: phospholipase D activity | 2.65E-03 |
| 42 | GO:0008308: voltage-gated anion channel activity | 2.65E-03 |
| 43 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 2.65E-03 |
| 44 | GO:0004364: glutathione transferase activity | 3.06E-03 |
| 45 | GO:0015293: symporter activity | 3.58E-03 |
| 46 | GO:0004568: chitinase activity | 3.73E-03 |
| 47 | GO:0004672: protein kinase activity | 3.75E-03 |
| 48 | GO:0008559: xenobiotic-transporting ATPase activity | 4.12E-03 |
| 49 | GO:0015114: phosphate ion transmembrane transporter activity | 4.93E-03 |
| 50 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.93E-03 |
| 51 | GO:0005262: calcium channel activity | 4.93E-03 |
| 52 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.36E-03 |
| 53 | GO:0046872: metal ion binding | 5.38E-03 |
| 54 | GO:0005217: intracellular ligand-gated ion channel activity | 5.80E-03 |
| 55 | GO:0008061: chitin binding | 5.80E-03 |
| 56 | GO:0003712: transcription cofactor activity | 5.80E-03 |
| 57 | GO:0004970: ionotropic glutamate receptor activity | 5.80E-03 |
| 58 | GO:0003954: NADH dehydrogenase activity | 6.71E-03 |
| 59 | GO:0004298: threonine-type endopeptidase activity | 7.68E-03 |
| 60 | GO:0033612: receptor serine/threonine kinase binding | 7.68E-03 |
| 61 | GO:0008810: cellulase activity | 8.69E-03 |
| 62 | GO:0022891: substrate-specific transmembrane transporter activity | 8.69E-03 |
| 63 | GO:0003756: protein disulfide isomerase activity | 9.21E-03 |
| 64 | GO:0010181: FMN binding | 1.14E-02 |
| 65 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.34E-02 |
| 66 | GO:0016791: phosphatase activity | 1.44E-02 |
| 67 | GO:0008168: methyltransferase activity | 1.57E-02 |
| 68 | GO:0051213: dioxygenase activity | 1.63E-02 |
| 69 | GO:0043531: ADP binding | 1.79E-02 |
| 70 | GO:0004806: triglyceride lipase activity | 1.83E-02 |
| 71 | GO:0004683: calmodulin-dependent protein kinase activity | 1.83E-02 |
| 72 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.90E-02 |
| 73 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.33E-02 |
| 74 | GO:0004871: signal transducer activity | 2.55E-02 |
| 75 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.56E-02 |
| 76 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.62E-02 |
| 77 | GO:0005509: calcium ion binding | 2.70E-02 |
| 78 | GO:0035091: phosphatidylinositol binding | 2.96E-02 |
| 79 | GO:0051287: NAD binding | 3.20E-02 |
| 80 | GO:0016298: lipase activity | 3.54E-02 |
| 81 | GO:0015171: amino acid transmembrane transporter activity | 3.72E-02 |
| 82 | GO:0008234: cysteine-type peptidase activity | 3.72E-02 |
| 83 | GO:0016757: transferase activity, transferring glycosyl groups | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.94E-04 |
| 2 | GO:0005886: plasma membrane | 7.86E-04 |
| 3 | GO:0030660: Golgi-associated vesicle membrane | 9.21E-04 |
| 4 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 9.21E-04 |
| 5 | GO:0005788: endoplasmic reticulum lumen | 1.60E-03 |
| 6 | GO:0016021: integral component of membrane | 2.28E-03 |
| 7 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.32E-03 |
| 8 | GO:0005783: endoplasmic reticulum | 2.60E-03 |
| 9 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.65E-03 |
| 10 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.65E-03 |
| 11 | GO:0046930: pore complex | 2.65E-03 |
| 12 | GO:0005765: lysosomal membrane | 4.12E-03 |
| 13 | GO:0005839: proteasome core complex | 7.68E-03 |
| 14 | GO:0005741: mitochondrial outer membrane | 7.68E-03 |
| 15 | GO:0009504: cell plate | 1.20E-02 |
| 16 | GO:0016592: mediator complex | 1.32E-02 |
| 17 | GO:0005774: vacuolar membrane | 1.66E-02 |
| 18 | GO:0000325: plant-type vacuole | 2.19E-02 |
| 19 | GO:0090406: pollen tube | 2.80E-02 |
| 20 | GO:0031966: mitochondrial membrane | 3.29E-02 |
| 21 | GO:0000502: proteasome complex | 3.46E-02 |
| 22 | GO:0005747: mitochondrial respiratory chain complex I | 3.98E-02 |
| 23 | GO:0005887: integral component of plasma membrane | 4.05E-02 |
| 24 | GO:0005834: heterotrimeric G-protein complex | 4.07E-02 |
| 25 | GO:0009706: chloroplast inner membrane | 4.44E-02 |