co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0009715: chalcone biosynthetic process	0.00E+00
3	GO:0090393: sepal giant cell development	0.00E+00
4	GO:0006573: valine metabolic process	0.00E+00
5	GO:0010583: response to cyclopentenone	4.68E-07
6	GO:0071555: cell wall organization	5.19E-06
7	GO:0080167: response to karrikin	7.64E-06
8	GO:0071554: cell wall organization or biogenesis	1.30E-05
9	GO:0045489: pectin biosynthetic process	1.76E-04
10	GO:0007155: cell adhesion	2.06E-04
11	GO:0000066: mitochondrial ornithine transport	2.32E-04
12	GO:1901349: glucosinolate transport	2.32E-04
13	GO:1902265: abscisic acid homeostasis	2.32E-04
14	GO:0090449: phloem glucosinolate loading	2.32E-04
15	GO:0071370: cellular response to gibberellin stimulus	2.32E-04
16	GO:0006723: cuticle hydrocarbon biosynthetic process	2.32E-04
17	GO:0006551: leucine metabolic process	2.32E-04
18	GO:0016126: sterol biosynthetic process	3.89E-04
19	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.79E-04
20	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.15E-04
21	GO:2000123: positive regulation of stomatal complex development	5.15E-04
22	GO:0006695: cholesterol biosynthetic process	5.15E-04
23	GO:0009629: response to gravity	5.15E-04
24	GO:0007154: cell communication	5.15E-04
25	GO:0009813: flavonoid biosynthetic process	5.83E-04
26	GO:0030036: actin cytoskeleton organization	6.45E-04
27	GO:0048768: root hair cell tip growth	7.26E-04
28	GO:0031022: nuclear migration along microfilament	8.37E-04
29	GO:0043447: alkane biosynthetic process	8.37E-04
30	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8.37E-04
31	GO:0006833: water transport	9.01E-04
32	GO:0051016: barbed-end actin filament capping	1.19E-03
33	GO:0032877: positive regulation of DNA endoreduplication	1.19E-03
34	GO:0019676: ammonia assimilation cycle	1.59E-03
35	GO:2000038: regulation of stomatal complex development	1.59E-03
36	GO:0006546: glycine catabolic process	1.59E-03
37	GO:0009902: chloroplast relocation	1.59E-03
38	GO:0009694: jasmonic acid metabolic process	1.59E-03
39	GO:0006542: glutamine biosynthetic process	1.59E-03
40	GO:0042335: cuticle development	1.81E-03
41	GO:0000271: polysaccharide biosynthetic process	1.81E-03
42	GO:0034220: ion transmembrane transport	1.81E-03
43	GO:0009741: response to brassinosteroid	1.95E-03
44	GO:0032876: negative regulation of DNA endoreduplication	2.03E-03
45	GO:0010375: stomatal complex patterning	2.03E-03
46	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.50E-03
47	GO:0007264: small GTPase mediated signal transduction	2.56E-03
48	GO:0010555: response to mannitol	3.00E-03
49	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.00E-03
50	GO:2000067: regulation of root morphogenesis	3.00E-03
51	GO:0045926: negative regulation of growth	3.00E-03
52	GO:0009082: branched-chain amino acid biosynthetic process	3.00E-03
53	GO:0017148: negative regulation of translation	3.00E-03
54	GO:0009099: valine biosynthetic process	3.00E-03
55	GO:0009903: chloroplast avoidance movement	3.00E-03
56	GO:0009554: megasporogenesis	3.00E-03
57	GO:0007267: cell-cell signaling	3.08E-03
58	GO:0006400: tRNA modification	3.54E-03
59	GO:0051510: regulation of unidimensional cell growth	3.54E-03
60	GO:0006633: fatty acid biosynthetic process	4.07E-03
61	GO:0052543: callose deposition in cell wall	4.10E-03
62	GO:0008610: lipid biosynthetic process	4.10E-03
63	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.10E-03
64	GO:0006402: mRNA catabolic process	4.10E-03
65	GO:0045010: actin nucleation	4.10E-03
66	GO:0031540: regulation of anthocyanin biosynthetic process	4.10E-03
67	GO:0022900: electron transport chain	4.70E-03
68	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.70E-03
69	GO:0007186: G-protein coupled receptor signaling pathway	4.70E-03
70	GO:0048193: Golgi vesicle transport	4.70E-03
71	GO:0009097: isoleucine biosynthetic process	4.70E-03
72	GO:0007389: pattern specification process	4.70E-03
73	GO:0000902: cell morphogenesis	5.32E-03
74	GO:0045337: farnesyl diphosphate biosynthetic process	5.32E-03
75	GO:0033384: geranyl diphosphate biosynthetic process	5.32E-03
76	GO:0006754: ATP biosynthetic process	5.32E-03
77	GO:0048589: developmental growth	5.32E-03
78	GO:0009056: catabolic process	5.32E-03
79	GO:0016051: carbohydrate biosynthetic process	5.71E-03
80	GO:0009638: phototropism	5.97E-03
81	GO:0010192: mucilage biosynthetic process	6.65E-03
82	GO:0051555: flavonol biosynthetic process	6.65E-03
83	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.65E-03
84	GO:0043069: negative regulation of programmed cell death	6.65E-03
85	GO:0000038: very long-chain fatty acid metabolic process	7.35E-03
86	GO:0009773: photosynthetic electron transport in photosystem I	7.35E-03
87	GO:0009750: response to fructose	7.35E-03
88	GO:0009744: response to sucrose	7.36E-03
89	GO:0042546: cell wall biogenesis	7.65E-03
90	GO:0016024: CDP-diacylglycerol biosynthetic process	8.08E-03
91	GO:0050826: response to freezing	8.84E-03
92	GO:0009725: response to hormone	8.84E-03
93	GO:0030048: actin filament-based movement	8.84E-03
94	GO:2000028: regulation of photoperiodism, flowering	8.84E-03
95	GO:0010143: cutin biosynthetic process	9.62E-03
96	GO:0019253: reductive pentose-phosphate cycle	9.62E-03
97	GO:0009825: multidimensional cell growth	1.04E-02
98	GO:0005985: sucrose metabolic process	1.04E-02
99	GO:0006857: oligopeptide transport	1.06E-02
100	GO:0010025: wax biosynthetic process	1.13E-02
101	GO:0009833: plant-type primary cell wall biogenesis	1.13E-02
102	GO:0007010: cytoskeleton organization	1.21E-02
103	GO:0007017: microtubule-based process	1.30E-02
104	GO:0009695: jasmonic acid biosynthetic process	1.30E-02
105	GO:0031408: oxylipin biosynthetic process	1.39E-02
106	GO:0010017: red or far-red light signaling pathway	1.48E-02
107	GO:0009742: brassinosteroid mediated signaling pathway	1.50E-02
108	GO:0040007: growth	1.57E-02
109	GO:0006810: transport	1.64E-02
110	GO:0032259: methylation	1.64E-02
111	GO:0019722: calcium-mediated signaling	1.67E-02
112	GO:0015991: ATP hydrolysis coupled proton transport	1.87E-02
113	GO:0000226: microtubule cytoskeleton organization	1.87E-02
114	GO:0080022: primary root development	1.87E-02
115	GO:0010051: xylem and phloem pattern formation	1.87E-02
116	GO:0008360: regulation of cell shape	1.97E-02
117	GO:0009958: positive gravitropism	1.97E-02
118	GO:0015986: ATP synthesis coupled proton transport	2.07E-02
119	GO:0009791: post-embryonic development	2.18E-02
120	GO:0009749: response to glucose	2.18E-02
121	GO:0006468: protein phosphorylation	2.40E-02
122	GO:0048235: pollen sperm cell differentiation	2.40E-02
123	GO:0007623: circadian rhythm	2.46E-02
124	GO:1901657: glycosyl compound metabolic process	2.51E-02
125	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.10E-02
126	GO:0010029: regulation of seed germination	3.10E-02
127	GO:0009733: response to auxin	3.26E-02
128	GO:0010411: xyloglucan metabolic process	3.34E-02
129	GO:0006950: response to stress	3.34E-02
130	GO:0016311: dephosphorylation	3.47E-02
131	GO:0009416: response to light stimulus	3.54E-02
132	GO:0030244: cellulose biosynthetic process	3.59E-02
133	GO:0009611: response to wounding	3.64E-02
134	GO:0048767: root hair elongation	3.72E-02
135	GO:0000160: phosphorelay signal transduction system	3.72E-02
136	GO:0009832: plant-type cell wall biogenesis	3.72E-02
137	GO:0010218: response to far red light	3.85E-02
138	GO:0016310: phosphorylation	3.87E-02
139	GO:0051301: cell division	3.93E-02
140	GO:0007568: aging	3.98E-02
141	GO:0010119: regulation of stomatal movement	3.98E-02
142	GO:0009860: pollen tube growth	4.08E-02
143	GO:0007049: cell cycle	4.23E-02
144	GO:0009637: response to blue light	4.25E-02
145	GO:0009867: jasmonic acid mediated signaling pathway	4.25E-02
146	GO:0006839: mitochondrial transport	4.67E-02
147	GO:0006631: fatty acid metabolic process	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
2	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
3	GO:0050613: delta14-sterol reductase activity	0.00E+00
4	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
5	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
6	GO:0016759: cellulose synthase activity	1.95E-05
7	GO:0016413: O-acetyltransferase activity	2.49E-05
8	GO:0016757: transferase activity, transferring glycosyl groups	3.10E-05
9	GO:0019901: protein kinase binding	2.16E-04
10	GO:0030797: 24-methylenesterol C-methyltransferase activity	2.32E-04
11	GO:0080132: fatty acid alpha-hydroxylase activity	2.32E-04
12	GO:0010313: phytochrome binding	2.32E-04
13	GO:0003838: sterol 24-C-methyltransferase activity	2.32E-04
14	GO:0003984: acetolactate synthase activity	2.32E-04
15	GO:0090448: glucosinolate:proton symporter activity	2.32E-04
16	GO:0045486: naringenin 3-dioxygenase activity	2.32E-04
17	GO:0005200: structural constituent of cytoskeleton	3.33E-04
18	GO:0004618: phosphoglycerate kinase activity	5.15E-04
19	GO:0004047: aminomethyltransferase activity	5.15E-04
20	GO:0000064: L-ornithine transmembrane transporter activity	5.15E-04
21	GO:0048531: beta-1,3-galactosyltransferase activity	5.15E-04
22	GO:0001664: G-protein coupled receptor binding	8.37E-04
23	GO:0031683: G-protein beta/gamma-subunit complex binding	8.37E-04
24	GO:0003924: GTPase activity	8.99E-04
25	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.01E-04
26	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.01E-04
27	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.01E-04
28	GO:0001872: (1->3)-beta-D-glucan binding	1.19E-03
29	GO:0048027: mRNA 5'-UTR binding	1.19E-03
30	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.19E-03
31	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.31E-03
32	GO:0098599: palmitoyl hydrolase activity	1.59E-03
33	GO:0045430: chalcone isomerase activity	1.59E-03
34	GO:0046527: glucosyltransferase activity	1.59E-03
35	GO:0004356: glutamate-ammonia ligase activity	2.03E-03
36	GO:0045431: flavonol synthase activity	2.03E-03
37	GO:0009922: fatty acid elongase activity	2.03E-03
38	GO:0008474: palmitoyl-(protein) hydrolase activity	2.50E-03
39	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.50E-03
40	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.50E-03
41	GO:0016758: transferase activity, transferring hexosyl groups	2.95E-03
42	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.08E-03
43	GO:0015250: water channel activity	3.46E-03
44	GO:0016621: cinnamoyl-CoA reductase activity	3.54E-03
45	GO:0030247: polysaccharide binding	4.07E-03
46	GO:0004564: beta-fructofuranosidase activity	4.10E-03
47	GO:0003843: 1,3-beta-D-glucan synthase activity	4.70E-03
48	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.32E-03
49	GO:0004337: geranyltranstransferase activity	5.32E-03
50	GO:0005525: GTP binding	5.87E-03
51	GO:0004575: sucrose alpha-glucosidase activity	5.97E-03
52	GO:0004161: dimethylallyltranstransferase activity	7.35E-03
53	GO:0004860: protein kinase inhibitor activity	7.35E-03
54	GO:0046961: proton-transporting ATPase activity, rotational mechanism	7.35E-03
55	GO:0004674: protein serine/threonine kinase activity	8.59E-03
56	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.62E-03
57	GO:0052689: carboxylic ester hydrolase activity	1.20E-02
58	GO:0031418: L-ascorbic acid binding	1.21E-02
59	GO:0004176: ATP-dependent peptidase activity	1.39E-02
60	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.46E-02
61	GO:0016760: cellulose synthase (UDP-forming) activity	1.57E-02
62	GO:0004872: receptor activity	2.18E-02
63	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.29E-02
64	GO:0004518: nuclease activity	2.40E-02
65	GO:0000156: phosphorelay response regulator activity	2.51E-02
66	GO:0051015: actin filament binding	2.51E-02
67	GO:0016791: phosphatase activity	2.62E-02
68	GO:0008483: transaminase activity	2.74E-02
69	GO:0008237: metallopeptidase activity	2.74E-02
70	GO:0008194: UDP-glycosyltransferase activity	2.75E-02
71	GO:0016597: amino acid binding	2.86E-02
72	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.34E-02
73	GO:0102483: scopolin beta-glucosidase activity	3.34E-02
74	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.47E-02
75	GO:0046982: protein heterodimerization activity	3.72E-02
76	GO:0004222: metalloendopeptidase activity	3.85E-02
77	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.85E-02
78	GO:0016788: hydrolase activity, acting on ester bonds	3.86E-02
79	GO:0016740: transferase activity	4.52E-02
80	GO:0008422: beta-glucosidase activity	4.53E-02
81	GO:0004672: protein kinase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0005948: acetolactate synthase complex	0.00E+00
2	GO:0005794: Golgi apparatus	7.05E-07
3	GO:0009505: plant-type cell wall	1.33E-05
4	GO:0009506: plasmodesma	2.50E-05
5	GO:0046658: anchored component of plasma membrane	2.73E-05
6	GO:0031225: anchored component of membrane	8.27E-05
7	GO:0000139: Golgi membrane	9.56E-05
8	GO:0005576: extracellular region	1.34E-04
9	GO:0016021: integral component of membrane	1.91E-04
10	GO:0005886: plasma membrane	3.83E-04
11	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.15E-04
12	GO:0005775: vacuolar lumen	1.19E-03
13	GO:0005773: vacuole	1.50E-03
14	GO:0010168: ER body	2.50E-03
15	GO:0000148: 1,3-beta-D-glucan synthase complex	4.70E-03
16	GO:0005618: cell wall	5.18E-03
17	GO:0000325: plant-type vacuole	5.21E-03
18	GO:0045298: tubulin complex	5.32E-03
19	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.32E-03
20	GO:0000786: nucleosome	5.45E-03
21	GO:0048471: perinuclear region of cytoplasm	7.35E-03
22	GO:0005856: cytoskeleton	8.27E-03
23	GO:0030176: integral component of endoplasmic reticulum membrane	1.04E-02
24	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.04E-02
25	GO:0048046: apoplast	1.15E-02
26	GO:0005802: trans-Golgi network	1.95E-02
27	GO:0005768: endosome	2.36E-02
28	GO:0030529: intracellular ribonucleoprotein complex	2.98E-02
29	GO:0031902: late endosome membrane	4.81E-02