Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G23580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0016119: carotene metabolic process4.26E-06
2GO:0071554: cell wall organization or biogenesis1.01E-05
3GO:0016123: xanthophyll biosynthetic process6.40E-05
4GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity9.94E-05
5GO:0010380: regulation of chlorophyll biosynthetic process2.05E-04
6GO:0010187: negative regulation of seed germination4.07E-04
7GO:0015991: ATP hydrolysis coupled proton transport6.08E-04
8GO:0015986: ATP synthesis coupled proton transport6.68E-04
9GO:0009910: negative regulation of flower development1.20E-03
10GO:0009740: gibberellic acid mediated signaling pathway2.23E-03
11GO:0051726: regulation of cell cycle2.41E-03
12GO:0007623: circadian rhythm3.36E-03
13GO:0010468: regulation of gene expression3.79E-03
14GO:0007049: cell cycle4.87E-03
15GO:0080167: response to karrikin5.24E-03
16GO:0010200: response to chitin5.36E-03
17GO:0009735: response to cytokinin9.61E-03
18GO:0009416: response to light stimulus1.02E-02
19GO:0035556: intracellular signal transduction1.06E-02
20GO:0051301: cell division1.09E-02
21GO:0009414: response to water deprivation1.66E-02
22GO:0030154: cell differentiation1.79E-02
RankGO TermAdjusted P value
1GO:0010291: carotene beta-ring hydroxylase activity1.18E-05
2GO:0016413: O-acetyltransferase activity1.50E-05
3GO:0098599: palmitoyl hydrolase activity4.83E-05
4GO:0008474: palmitoyl-(protein) hydrolase activity8.11E-05
5GO:0046961: proton-transporting ATPase activity, rotational mechanism2.53E-04
6GO:0001085: RNA polymerase II transcription factor binding6.38E-04
7GO:0019901: protein kinase binding6.99E-04
8GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.17E-03
9GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.20E-03
10GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.95E-03
11GO:0015297: antiporter activity3.25E-03
12GO:0003682: chromatin binding4.69E-03
13GO:0005506: iron ion binding1.67E-02
14GO:0044212: transcription regulatory region DNA binding1.69E-02
15GO:0005215: transporter activity1.81E-02
16GO:0016491: oxidoreductase activity2.05E-02
17GO:0004672: protein kinase activity2.22E-02
18GO:0016787: hydrolase activity2.90E-02
RankGO TermAdjusted P value
1GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain1.18E-05
2GO:0048471: perinuclear region of cytoplasm2.53E-04
3GO:0005753: mitochondrial proton-transporting ATP synthase complex3.54E-04
4GO:0005667: transcription factor complex9.92E-04
5GO:0009543: chloroplast thylakoid lumen2.70E-03
6GO:0046658: anchored component of plasma membrane4.06E-03
7GO:0031969: chloroplast membrane5.24E-03
8GO:0031225: anchored component of membrane1.40E-02
9GO:0009507: chloroplast2.06E-02
10GO:0005794: Golgi apparatus2.68E-02
11GO:0005774: vacuolar membrane4.09E-02
Gene type



Gene DE type