Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G23560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043201: response to leucine0.00E+00
2GO:0080052: response to histidine0.00E+00
3GO:0046680: response to DDT0.00E+00
4GO:0046865: terpenoid transport0.00E+00
5GO:0080053: response to phenylalanine0.00E+00
6GO:0033587: shikimate biosynthetic process0.00E+00
7GO:0051238: sequestering of metal ion0.00E+00
8GO:0071456: cellular response to hypoxia7.30E-07
9GO:0042742: defense response to bacterium2.32E-06
10GO:0002229: defense response to oomycetes8.85E-05
11GO:0010204: defense response signaling pathway, resistance gene-independent1.22E-04
12GO:0051938: L-glutamate import1.42E-04
13GO:0015760: glucose-6-phosphate transport1.42E-04
14GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.42E-04
15GO:0010726: positive regulation of hydrogen peroxide metabolic process1.42E-04
16GO:0010421: hydrogen peroxide-mediated programmed cell death1.42E-04
17GO:0000032: cell wall mannoprotein biosynthetic process1.42E-04
18GO:0006468: protein phosphorylation1.84E-04
19GO:0048569: post-embryonic animal organ development3.25E-04
20GO:0015712: hexose phosphate transport3.25E-04
21GO:0043066: negative regulation of apoptotic process3.25E-04
22GO:0042939: tripeptide transport3.25E-04
23GO:0019725: cellular homeostasis3.25E-04
24GO:0043091: L-arginine import3.25E-04
25GO:0009805: coumarin biosynthetic process3.25E-04
26GO:0015692: lead ion transport5.33E-04
27GO:0033591: response to L-ascorbic acid5.33E-04
28GO:0015714: phosphoenolpyruvate transport5.33E-04
29GO:0080168: abscisic acid transport5.33E-04
30GO:0071367: cellular response to brassinosteroid stimulus5.33E-04
31GO:0009062: fatty acid catabolic process5.33E-04
32GO:0035436: triose phosphate transmembrane transport5.33E-04
33GO:0051176: positive regulation of sulfur metabolic process5.33E-04
34GO:0010186: positive regulation of cellular defense response5.33E-04
35GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway5.33E-04
36GO:0006874: cellular calcium ion homeostasis5.65E-04
37GO:0016998: cell wall macromolecule catabolic process6.19E-04
38GO:0010104: regulation of ethylene-activated signaling pathway7.63E-04
39GO:0045017: glycerolipid biosynthetic process7.63E-04
40GO:0009298: GDP-mannose biosynthetic process7.63E-04
41GO:0070301: cellular response to hydrogen peroxide7.63E-04
42GO:0009626: plant-type hypersensitive response8.28E-04
43GO:0033358: UDP-L-arabinose biosynthetic process1.01E-03
44GO:0015713: phosphoglycerate transport1.01E-03
45GO:1901002: positive regulation of response to salt stress1.01E-03
46GO:0042991: transcription factor import into nucleus1.01E-03
47GO:0042938: dipeptide transport1.01E-03
48GO:0010109: regulation of photosynthesis1.01E-03
49GO:0060548: negative regulation of cell death1.01E-03
50GO:0045227: capsule polysaccharide biosynthetic process1.01E-03
51GO:0010193: response to ozone1.22E-03
52GO:0009823: cytokinin catabolic process1.28E-03
53GO:0009751: response to salicylic acid1.36E-03
54GO:0009643: photosynthetic acclimation1.57E-03
55GO:0050665: hydrogen peroxide biosynthetic process1.57E-03
56GO:0010942: positive regulation of cell death1.57E-03
57GO:0015691: cadmium ion transport1.57E-03
58GO:0010256: endomembrane system organization1.57E-03
59GO:0051607: defense response to virus1.65E-03
60GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.88E-03
61GO:0009854: oxidative photosynthetic carbon pathway1.88E-03
62GO:0050829: defense response to Gram-negative bacterium2.21E-03
63GO:1900057: positive regulation of leaf senescence2.21E-03
64GO:0009407: toxin catabolic process2.50E-03
65GO:0030091: protein repair2.56E-03
66GO:2000070: regulation of response to water deprivation2.56E-03
67GO:0001558: regulation of cell growth2.93E-03
68GO:0009699: phenylpropanoid biosynthetic process2.93E-03
69GO:0006098: pentose-phosphate shunt3.31E-03
70GO:0042542: response to hydrogen peroxide3.54E-03
71GO:0009744: response to sucrose3.68E-03
72GO:0051707: response to other organism3.68E-03
73GO:0090332: stomatal closure3.71E-03
74GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.71E-03
75GO:0009870: defense response signaling pathway, resistance gene-dependent4.12E-03
76GO:0006032: chitin catabolic process4.12E-03
77GO:0009636: response to toxic substance4.13E-03
78GO:0006855: drug transmembrane transport4.29E-03
79GO:0010200: response to chitin4.53E-03
80GO:0009089: lysine biosynthetic process via diaminopimelate4.55E-03
81GO:0000272: polysaccharide catabolic process4.55E-03
82GO:0009809: lignin biosynthetic process4.95E-03
83GO:0016024: CDP-diacylglycerol biosynthetic process4.99E-03
84GO:0055046: microgametogenesis5.45E-03
85GO:0010143: cutin biosynthetic process5.92E-03
86GO:0002237: response to molecule of bacterial origin5.92E-03
87GO:0009225: nucleotide-sugar metabolic process6.41E-03
88GO:0019853: L-ascorbic acid biosynthetic process6.41E-03
89GO:0070588: calcium ion transmembrane transport6.41E-03
90GO:0051302: regulation of cell division7.95E-03
91GO:0003333: amino acid transmembrane transport8.49E-03
92GO:0016226: iron-sulfur cluster assembly9.05E-03
93GO:0019748: secondary metabolic process9.05E-03
94GO:0009737: response to abscisic acid9.26E-03
95GO:0009845: seed germination9.54E-03
96GO:0071215: cellular response to abscisic acid stimulus9.62E-03
97GO:0071369: cellular response to ethylene stimulus9.62E-03
98GO:0006012: galactose metabolic process9.62E-03
99GO:0009561: megagametogenesis1.02E-02
100GO:0006817: phosphate ion transport1.02E-02
101GO:0006885: regulation of pH1.20E-02
102GO:0010150: leaf senescence1.22E-02
103GO:0009646: response to absence of light1.26E-02
104GO:0006623: protein targeting to vacuole1.33E-02
105GO:0048825: cotyledon development1.33E-02
106GO:0009749: response to glucose1.33E-02
107GO:0006635: fatty acid beta-oxidation1.39E-02
108GO:0009416: response to light stimulus1.47E-02
109GO:0010252: auxin homeostasis1.60E-02
110GO:0050832: defense response to fungus1.64E-02
111GO:0009615: response to virus1.81E-02
112GO:0009627: systemic acquired resistance1.96E-02
113GO:0016311: dephosphorylation2.11E-02
114GO:0009723: response to ethylene2.19E-02
115GO:0080167: response to karrikin2.35E-02
116GO:0010043: response to zinc ion2.42E-02
117GO:0007568: aging2.42E-02
118GO:0006839: mitochondrial transport2.84E-02
119GO:0032259: methylation3.31E-02
120GO:0031347: regulation of defense response3.55E-02
121GO:0006979: response to oxidative stress3.60E-02
122GO:0042538: hyperosmotic salinity response3.65E-02
123GO:0006812: cation transport3.65E-02
124GO:0009753: response to jasmonic acid3.71E-02
125GO:0006486: protein glycosylation3.83E-02
126GO:0006813: potassium ion transport3.83E-02
127GO:0009736: cytokinin-activated signaling pathway3.83E-02
128GO:0006857: oligopeptide transport4.02E-02
129GO:0009620: response to fungus4.62E-02
130GO:0042545: cell wall modification4.82E-02
131GO:0009624: response to nematode4.92E-02
132GO:0055114: oxidation-reduction process4.93E-02
133GO:0016567: protein ubiquitination4.99E-02
RankGO TermAdjusted P value
1GO:0016301: kinase activity9.28E-05
2GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.42E-04
3GO:0004476: mannose-6-phosphate isomerase activity1.42E-04
4GO:0010285: L,L-diaminopimelate aminotransferase activity1.42E-04
5GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor1.42E-04
6GO:0008809: carnitine racemase activity1.42E-04
7GO:0030246: carbohydrate binding2.63E-04
8GO:0015152: glucose-6-phosphate transmembrane transporter activity3.25E-04
9GO:0042937: tripeptide transporter activity3.25E-04
10GO:0005217: intracellular ligand-gated ion channel activity4.15E-04
11GO:0004970: ionotropic glutamate receptor activity4.15E-04
12GO:0071917: triose-phosphate transmembrane transporter activity5.33E-04
13GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity7.63E-04
14GO:0015181: arginine transmembrane transporter activity7.63E-04
15GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity7.63E-04
16GO:0004165: dodecenoyl-CoA delta-isomerase activity7.63E-04
17GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity7.63E-04
18GO:0015189: L-lysine transmembrane transporter activity7.63E-04
19GO:0005313: L-glutamate transmembrane transporter activity1.01E-03
20GO:0010279: indole-3-acetic acid amido synthetase activity1.01E-03
21GO:0009916: alternative oxidase activity1.01E-03
22GO:0008891: glycolate oxidase activity1.01E-03
23GO:0015120: phosphoglycerate transmembrane transporter activity1.01E-03
24GO:0050373: UDP-arabinose 4-epimerase activity1.01E-03
25GO:0004737: pyruvate decarboxylase activity1.01E-03
26GO:0042936: dipeptide transporter activity1.01E-03
27GO:0019139: cytokinin dehydrogenase activity1.28E-03
28GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.57E-03
29GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.57E-03
30GO:0030976: thiamine pyrophosphate binding1.57E-03
31GO:0004674: protein serine/threonine kinase activity1.61E-03
32GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.88E-03
33GO:0003978: UDP-glucose 4-epimerase activity1.88E-03
34GO:0004144: diacylglycerol O-acyltransferase activity1.88E-03
35GO:0016831: carboxy-lyase activity2.21E-03
36GO:0005544: calcium-dependent phospholipid binding2.56E-03
37GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.57E-03
38GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.61E-03
39GO:0005524: ATP binding3.33E-03
40GO:0004364: glutathione transferase activity3.54E-03
41GO:0015174: basic amino acid transmembrane transporter activity3.71E-03
42GO:0050660: flavin adenine dinucleotide binding3.97E-03
43GO:0008047: enzyme activator activity4.12E-03
44GO:0004568: chitinase activity4.12E-03
45GO:0008171: O-methyltransferase activity4.12E-03
46GO:0008559: xenobiotic-transporting ATPase activity4.55E-03
47GO:0015114: phosphate ion transmembrane transporter activity5.45E-03
48GO:0005388: calcium-transporting ATPase activity5.45E-03
49GO:0005315: inorganic phosphate transmembrane transporter activity5.45E-03
50GO:0008131: primary amine oxidase activity5.92E-03
51GO:0008061: chitin binding6.41E-03
52GO:0008134: transcription factor binding7.42E-03
53GO:0004499: N,N-dimethylaniline monooxygenase activity1.02E-02
54GO:0005451: monovalent cation:proton antiporter activity1.14E-02
55GO:0015297: antiporter activity1.16E-02
56GO:0015299: solute:proton antiporter activity1.26E-02
57GO:0010181: FMN binding1.26E-02
58GO:0048038: quinone binding1.39E-02
59GO:0015385: sodium:proton antiporter activity1.53E-02
60GO:0016791: phosphatase activity1.60E-02
61GO:0008483: transaminase activity1.67E-02
62GO:0004672: protein kinase activity1.72E-02
63GO:0051213: dioxygenase activity1.81E-02
64GO:0004683: calmodulin-dependent protein kinase activity2.03E-02
65GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.11E-02
66GO:0015238: drug transmembrane transporter activity2.26E-02
67GO:0030145: manganese ion binding2.42E-02
68GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.59E-02
69GO:0050661: NADP binding2.84E-02
70GO:0009055: electron carrier activity3.71E-02
71GO:0043565: sequence-specific DNA binding4.07E-02
72GO:0015171: amino acid transmembrane transporter activity4.12E-02
73GO:0045330: aspartyl esterase activity4.12E-02
74GO:0045735: nutrient reservoir activity4.32E-02
75GO:0030599: pectinesterase activity4.72E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.23E-07
2GO:0005770: late endosome9.96E-04
3GO:0046658: anchored component of plasma membrane2.71E-03
4GO:0070469: respiratory chain7.95E-03
5GO:0071944: cell periphery1.53E-02
6GO:0032580: Golgi cisterna membrane1.60E-02
7GO:0005886: plasma membrane1.84E-02
8GO:0000325: plant-type vacuole2.42E-02
9GO:0031225: anchored component of membrane2.58E-02
10GO:0005743: mitochondrial inner membrane3.22E-02
11GO:0031966: mitochondrial membrane3.65E-02
Gene type



Gene DE type