Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G23510

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010430: fatty acid omega-oxidation0.00E+00
2GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
3GO:0015822: ornithine transport0.00E+00
4GO:0080094: response to trehalose-6-phosphate0.00E+00
5GO:0006546: glycine catabolic process1.51E-06
6GO:0007155: cell adhesion1.08E-05
7GO:0006169: adenosine salvage3.50E-05
8GO:0000066: mitochondrial ornithine transport3.50E-05
9GO:0019510: S-adenosylhomocysteine catabolic process3.50E-05
10GO:0033353: S-adenosylmethionine cycle8.78E-05
11GO:1900111: positive regulation of histone H3-K9 dimethylation8.78E-05
12GO:0048587: regulation of short-day photoperiodism, flowering8.78E-05
13GO:0006152: purine nucleoside catabolic process8.78E-05
14GO:0006730: one-carbon metabolic process1.03E-04
15GO:0032922: circadian regulation of gene expression1.52E-04
16GO:0010583: response to cyclopentenone2.16E-04
17GO:0019464: glycine decarboxylation via glycine cleavage system3.05E-04
18GO:0044209: AMP salvage3.89E-04
19GO:0006796: phosphate-containing compound metabolic process4.78E-04
20GO:0006555: methionine metabolic process4.78E-04
21GO:0017148: negative regulation of translation5.70E-04
22GO:0048193: Golgi vesicle transport8.71E-04
23GO:0006096: glycolytic process9.63E-04
24GO:0048589: developmental growth9.78E-04
25GO:0035999: tetrahydrofolate interconversion1.09E-03
26GO:0046686: response to cadmium ion1.12E-03
27GO:0051555: flavonol biosynthetic process1.20E-03
28GO:0019253: reductive pentose-phosphate cycle1.70E-03
29GO:0007010: cytoskeleton organization2.12E-03
30GO:0000271: polysaccharide biosynthetic process3.20E-03
31GO:0045489: pectin biosynthetic process3.36E-03
32GO:0016032: viral process4.06E-03
33GO:0007267: cell-cell signaling4.60E-03
34GO:0016126: sterol biosynthetic process4.99E-03
35GO:0018298: protein-chromophore linkage5.99E-03
36GO:0048767: root hair elongation6.19E-03
37GO:0016051: carbohydrate biosynthetic process7.05E-03
38GO:0006839: mitochondrial transport7.72E-03
39GO:0009553: embryo sac development1.30E-02
40GO:0045490: pectin catabolic process1.96E-02
41GO:0010228: vegetative to reproductive phase transition of meristem2.02E-02
42GO:0005975: carbohydrate metabolic process2.97E-02
43GO:0080167: response to karrikin3.11E-02
44GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.19E-02
45GO:0016042: lipid catabolic process4.03E-02
46GO:0006281: DNA repair4.11E-02
47GO:0008152: metabolic process4.41E-02
48GO:0009793: embryo development ending in seed dormancy4.52E-02
RankGO TermAdjusted P value
1GO:0050613: delta14-sterol reductase activity0.00E+00
2GO:0047974: guanosine deaminase activity0.00E+00
3GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
4GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity3.50E-05
5GO:0004013: adenosylhomocysteinase activity3.50E-05
6GO:0010313: phytochrome binding3.50E-05
7GO:0004001: adenosine kinase activity3.50E-05
8GO:0004618: phosphoglycerate kinase activity8.78E-05
9GO:0004047: aminomethyltransferase activity8.78E-05
10GO:0046593: mandelonitrile lyase activity8.78E-05
11GO:0000064: L-ornithine transmembrane transporter activity8.78E-05
12GO:0003913: DNA photolyase activity1.52E-04
13GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity2.25E-04
14GO:0004375: glycine dehydrogenase (decarboxylating) activity2.25E-04
15GO:0048027: mRNA 5'-UTR binding2.25E-04
16GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.25E-04
17GO:0016462: pyrophosphatase activity4.78E-04
18GO:0016832: aldehyde-lyase activity5.70E-04
19GO:0004427: inorganic diphosphatase activity6.66E-04
20GO:0009881: photoreceptor activity6.66E-04
21GO:0035064: methylated histone binding7.68E-04
22GO:0016757: transferase activity, transferring glycosyl groups7.86E-04
23GO:0016758: transferase activity, transferring hexosyl groups1.39E-03
24GO:0004565: beta-galactosidase activity1.57E-03
25GO:0008194: UDP-glycosyltransferase activity2.17E-03
26GO:0051087: chaperone binding2.26E-03
27GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.56E-03
28GO:0030570: pectate lyase activity2.71E-03
29GO:0004518: nuclease activity4.06E-03
30GO:0005200: structural constituent of cytoskeleton4.60E-03
31GO:0008483: transaminase activity4.60E-03
32GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.61E-03
33GO:0051287: NAD binding9.61E-03
34GO:0045735: nutrient reservoir activity1.17E-02
35GO:0080043: quercetin 3-O-glucosyltransferase activity1.25E-02
36GO:0080044: quercetin 7-O-glucosyltransferase activity1.25E-02
37GO:0005507: copper ion binding1.38E-02
38GO:0016829: lyase activity1.65E-02
39GO:0015144: carbohydrate transmembrane transporter activity1.77E-02
40GO:0005351: sugar:proton symporter activity1.93E-02
41GO:0003676: nucleic acid binding2.05E-02
42GO:0042802: identical protein binding2.32E-02
43GO:0000287: magnesium ion binding2.64E-02
44GO:0050660: flavin adenine dinucleotide binding2.96E-02
45GO:0016787: hydrolase activity4.19E-02
46GO:0009055: electron carrier activity4.32E-02
RankGO TermAdjusted P value
1GO:0031225: anchored component of membrane4.23E-05
2GO:0045254: pyruvate dehydrogenase complex8.78E-05
3GO:0031519: PcG protein complex1.52E-04
4GO:0005960: glycine cleavage complex2.25E-04
5GO:0010168: ER body4.78E-04
6GO:0005677: chromatin silencing complex8.71E-04
7GO:0030176: integral component of endoplasmic reticulum membrane1.84E-03
8GO:0005802: trans-Golgi network2.54E-03
9GO:0046658: anchored component of plasma membrane2.56E-03
10GO:0005768: endosome2.99E-03
11GO:0005794: Golgi apparatus4.33E-03
12GO:0016020: membrane4.79E-03
13GO:0000139: Golgi membrane5.01E-03
14GO:0000325: plant-type vacuole6.61E-03
15GO:0005773: vacuole7.13E-03
16GO:0005856: cytoskeleton9.12E-03
17GO:0009579: thylakoid1.15E-02
18GO:0005829: cytosol1.64E-02
19GO:0048046: apoplast1.76E-02
20GO:0005759: mitochondrial matrix1.83E-02
21GO:0005576: extracellular region2.17E-02
22GO:0009536: plastid2.40E-02
23GO:0009506: plasmodesma2.81E-02
24GO:0009570: chloroplast stroma3.67E-02
25GO:0005743: mitochondrial inner membrane3.90E-02
26GO:0043231: intracellular membrane-bounded organelle4.41E-02
27GO:0005886: plasma membrane4.72E-02
Gene type



Gene DE type