co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0033494: ferulate metabolic process	0.00E+00
3	GO:0045176: apical protein localization	0.00E+00
4	GO:0046620: regulation of organ growth	4.52E-10
5	GO:0006833: water transport	2.29E-06
6	GO:0009926: auxin polar transport	2.66E-06
7	GO:0032544: plastid translation	3.09E-05
8	GO:0009733: response to auxin	5.05E-05
9	GO:0071588: hydrogen peroxide mediated signaling pathway	5.79E-05
10	GO:0042254: ribosome biogenesis	7.69E-05
11	GO:0010143: cutin biosynthetic process	1.06E-04
12	GO:0001736: establishment of planar polarity	1.41E-04
13	GO:0043255: regulation of carbohydrate biosynthetic process	1.41E-04
14	GO:0080055: low-affinity nitrate transport	2.40E-04
15	GO:0015840: urea transport	2.40E-04
16	GO:0034220: ion transmembrane transport	2.90E-04
17	GO:1901332: negative regulation of lateral root development	3.49E-04
18	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	3.49E-04
19	GO:0051639: actin filament network formation	3.49E-04
20	GO:0009650: UV protection	3.49E-04
21	GO:0006412: translation	3.64E-04
22	GO:0045490: pectin catabolic process	4.24E-04
23	GO:0051764: actin crosslink formation	4.66E-04
24	GO:0006461: protein complex assembly	5.92E-04
25	GO:0010337: regulation of salicylic acid metabolic process	7.24E-04
26	GO:0048827: phyllome development	7.24E-04
27	GO:0010311: lateral root formation	7.51E-04
28	GO:0010019: chloroplast-nucleus signaling pathway	8.63E-04
29	GO:0080086: stamen filament development	8.63E-04
30	GO:0009657: plastid organization	1.32E-03
31	GO:0006032: chitin catabolic process	1.83E-03
32	GO:0048829: root cap development	1.83E-03
33	GO:0006949: syncytium formation	1.83E-03
34	GO:0048765: root hair cell differentiation	2.02E-03
35	GO:0010015: root morphogenesis	2.02E-03
36	GO:0009624: response to nematode	2.14E-03
37	GO:0016024: CDP-diacylglycerol biosynthetic process	2.21E-03
38	GO:0009734: auxin-activated signaling pathway	2.38E-03
39	GO:0006006: glucose metabolic process	2.41E-03
40	GO:0010229: inflorescence development	2.41E-03
41	GO:0009725: response to hormone	2.41E-03
42	GO:0010540: basipetal auxin transport	2.62E-03
43	GO:0019253: reductive pentose-phosphate cycle	2.62E-03
44	GO:0010053: root epidermal cell differentiation	2.82E-03
45	GO:0009825: multidimensional cell growth	2.82E-03
46	GO:0010167: response to nitrate	2.82E-03
47	GO:0009735: response to cytokinin	2.85E-03
48	GO:0019762: glucosinolate catabolic process	3.04E-03
49	GO:0051017: actin filament bundle assembly	3.26E-03
50	GO:0000027: ribosomal large subunit assembly	3.26E-03
51	GO:0007017: microtubule-based process	3.49E-03
52	GO:0003333: amino acid transmembrane transport	3.72E-03
53	GO:0016998: cell wall macromolecule catabolic process	3.72E-03
54	GO:0009411: response to UV	4.20E-03
55	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.20E-03
56	GO:0055085: transmembrane transport	4.32E-03
57	GO:0006284: base-excision repair	4.44E-03
58	GO:0000413: protein peptidyl-prolyl isomerization	4.95E-03
59	GO:0009958: positive gravitropism	5.21E-03
60	GO:0048825: cotyledon development	5.75E-03
61	GO:0000302: response to reactive oxygen species	6.02E-03
62	GO:0071554: cell wall organization or biogenesis	6.02E-03
63	GO:0009828: plant-type cell wall loosening	6.88E-03
64	GO:0010027: thylakoid membrane organization	7.78E-03
65	GO:0009911: positive regulation of flower development	7.78E-03
66	GO:0015979: photosynthesis	8.01E-03
67	GO:0030244: cellulose biosynthetic process	9.36E-03
68	GO:0009651: response to salt stress	9.62E-03
69	GO:0009407: toxin catabolic process	1.00E-02
70	GO:0006281: DNA repair	1.04E-02
71	GO:0009631: cold acclimation	1.04E-02
72	GO:0006865: amino acid transport	1.07E-02
73	GO:0034599: cellular response to oxidative stress	1.14E-02
74	GO:0006810: transport	1.27E-02
75	GO:0010114: response to red light	1.32E-02
76	GO:0009636: response to toxic substance	1.44E-02
77	GO:0009664: plant-type cell wall organization	1.55E-02
78	GO:0009809: lignin biosynthetic process	1.63E-02
79	GO:0006857: oligopeptide transport	1.71E-02
80	GO:0006096: glycolytic process	1.84E-02
81	GO:0009416: response to light stimulus	1.85E-02
82	GO:0009742: brassinosteroid mediated signaling pathway	2.19E-02
83	GO:0042744: hydrogen peroxide catabolic process	2.70E-02
84	GO:0009790: embryo development	2.75E-02
85	GO:0040008: regulation of growth	2.99E-02
86	GO:0009739: response to gibberellin	3.35E-02
87	GO:0009414: response to water deprivation	3.65E-02
88	GO:0009826: unidimensional cell growth	4.11E-02
89	GO:0009658: chloroplast organization	4.22E-02
90	GO:0009723: response to ethylene	4.68E-02
91	GO:0080167: response to karrikin	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0030570: pectate lyase activity	5.39E-06
2	GO:0015250: water channel activity	2.48E-05
3	GO:0003735: structural constituent of ribosome	2.86E-05
4	GO:0015200: methylammonium transmembrane transporter activity	5.79E-05
5	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.41E-04
6	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.40E-04
7	GO:0080054: low-affinity nitrate transmembrane transporter activity	2.40E-04
8	GO:0050734: hydroxycinnamoyltransferase activity	2.40E-04
9	GO:0019843: rRNA binding	2.79E-04
10	GO:0016829: lyase activity	3.09E-04
11	GO:0015204: urea transmembrane transporter activity	4.66E-04
12	GO:0010011: auxin binding	4.66E-04
13	GO:0010328: auxin influx transmembrane transporter activity	4.66E-04
14	GO:0008725: DNA-3-methyladenine glycosylase activity	5.92E-04
15	GO:0016688: L-ascorbate peroxidase activity	7.24E-04
16	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	7.24E-04
17	GO:0008519: ammonium transmembrane transporter activity	7.24E-04
18	GO:0004130: cytochrome-c peroxidase activity	7.24E-04
19	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	7.24E-04
20	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.32E-03
21	GO:0004568: chitinase activity	1.83E-03
22	GO:0005528: FK506 binding	3.26E-03
23	GO:0051015: actin filament binding	6.59E-03
24	GO:0016791: phosphatase activity	6.88E-03
25	GO:0005200: structural constituent of cytoskeleton	7.18E-03
26	GO:0016413: O-acetyltransferase activity	7.47E-03
27	GO:0102483: scopolin beta-glucosidase activity	8.71E-03
28	GO:0030247: polysaccharide binding	8.71E-03
29	GO:0004871: signal transducer activity	8.80E-03
30	GO:0005215: transporter activity	8.86E-03
31	GO:0030145: manganese ion binding	1.04E-02
32	GO:0008422: beta-glucosidase activity	1.18E-02
33	GO:0050661: NADP binding	1.21E-02
34	GO:0004364: glutathione transferase activity	1.28E-02
35	GO:0015293: symporter activity	1.44E-02
36	GO:0051287: NAD binding	1.51E-02
37	GO:0015171: amino acid transmembrane transporter activity	1.75E-02
38	GO:0045735: nutrient reservoir activity	1.84E-02
39	GO:0016746: transferase activity, transferring acyl groups	2.14E-02
40	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.44E-02
41	GO:0016788: hydrolase activity, acting on ester bonds	4.28E-02
42	GO:0043531: ADP binding	4.51E-02
43	GO:0046983: protein dimerization activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0044391: ribosomal subunit	0.00E+00
2	GO:0009579: thylakoid	1.15E-09
3	GO:0005840: ribosome	2.59E-07
4	GO:0009543: chloroplast thylakoid lumen	5.70E-07
5	GO:0009941: chloroplast envelope	8.36E-07
6	GO:0009507: chloroplast	1.76E-06
7	GO:0031977: thylakoid lumen	2.22E-06
8	GO:0009570: chloroplast stroma	3.61E-06
9	GO:0009535: chloroplast thylakoid membrane	4.04E-05
10	GO:0009534: chloroplast thylakoid	1.02E-04
11	GO:0015630: microtubule cytoskeleton	3.49E-04
12	GO:0032432: actin filament bundle	3.49E-04
13	GO:0048046: apoplast	6.99E-04
14	GO:0005618: cell wall	8.29E-04
15	GO:0042807: central vacuole	1.01E-03
16	GO:0009986: cell surface	1.01E-03
17	GO:0009533: chloroplast stromal thylakoid	1.01E-03
18	GO:0000326: protein storage vacuole	1.32E-03
19	GO:0016020: membrane	1.44E-03
20	GO:0005884: actin filament	2.02E-03
21	GO:0005887: integral component of plasma membrane	2.27E-03
22	GO:0031012: extracellular matrix	2.41E-03
23	GO:0030095: chloroplast photosystem II	2.62E-03
24	GO:0009654: photosystem II oxygen evolving complex	3.49E-03
25	GO:0005770: late endosome	5.21E-03
26	GO:0009523: photosystem II	5.75E-03
27	GO:0019898: extrinsic component of membrane	5.75E-03
28	GO:0009295: nucleoid	7.18E-03
29	GO:0005886: plasma membrane	1.02E-02
30	GO:0015934: large ribosomal subunit	1.04E-02
31	GO:0009505: plant-type cell wall	1.04E-02
32	GO:0005576: extracellular region	2.63E-02
33	GO:0009705: plant-type vacuole membrane	3.09E-02
34	GO:0005874: microtubule	4.80E-02