co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23000

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006725: cellular aromatic compound metabolic process	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0006227: dUDP biosynthetic process	0.00E+00
4	GO:0006233: dTDP biosynthetic process	0.00E+00
5	GO:0006235: dTTP biosynthetic process	0.00E+00
6	GO:0015833: peptide transport	0.00E+00
7	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
8	GO:0046520: sphingoid biosynthetic process	6.42E-05
9	GO:0052542: defense response by callose deposition	1.55E-04
10	GO:0015865: purine nucleotide transport	1.55E-04
11	GO:0042939: tripeptide transport	1.55E-04
12	GO:0009308: amine metabolic process	1.55E-04
13	GO:0000162: tryptophan biosynthetic process	1.57E-04
14	GO:0006882: cellular zinc ion homeostasis	3.82E-04
15	GO:0051259: protein oligomerization	3.82E-04
16	GO:0070301: cellular response to hydrogen peroxide	3.82E-04
17	GO:0046902: regulation of mitochondrial membrane permeability	3.82E-04
18	GO:0072334: UDP-galactose transmembrane transport	3.82E-04
19	GO:0006809: nitric oxide biosynthetic process	3.82E-04
20	GO:0006878: cellular copper ion homeostasis	5.10E-04
21	GO:0042938: dipeptide transport	5.10E-04
22	GO:0048830: adventitious root development	5.10E-04
23	GO:0006085: acetyl-CoA biosynthetic process	5.10E-04
24	GO:0030308: negative regulation of cell growth	6.45E-04
25	GO:0010337: regulation of salicylic acid metabolic process	7.90E-04
26	GO:0006014: D-ribose metabolic process	7.90E-04
27	GO:0009759: indole glucosinolate biosynthetic process	7.90E-04
28	GO:0048280: vesicle fusion with Golgi apparatus	9.40E-04
29	GO:0006333: chromatin assembly or disassembly	1.10E-03
30	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.10E-03
31	GO:0006955: immune response	1.10E-03
32	GO:0009395: phospholipid catabolic process	1.10E-03
33	GO:0016559: peroxisome fission	1.26E-03
34	GO:0045454: cell redox homeostasis	1.41E-03
35	GO:0030968: endoplasmic reticulum unfolded protein response	1.44E-03
36	GO:0009808: lignin metabolic process	1.44E-03
37	GO:0008202: steroid metabolic process	1.81E-03
38	GO:0009641: shade avoidance	2.01E-03
39	GO:0006896: Golgi to vacuole transport	2.01E-03
40	GO:0006995: cellular response to nitrogen starvation	2.01E-03
41	GO:0043085: positive regulation of catalytic activity	2.21E-03
42	GO:0009684: indoleacetic acid biosynthetic process	2.21E-03
43	GO:0009682: induced systemic resistance	2.21E-03
44	GO:0052544: defense response by callose deposition in cell wall	2.21E-03
45	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.42E-03
46	GO:0071365: cellular response to auxin stimulus	2.42E-03
47	GO:0010053: root epidermal cell differentiation	3.09E-03
48	GO:0007031: peroxisome organization	3.09E-03
49	GO:0034976: response to endoplasmic reticulum stress	3.33E-03
50	GO:0007010: cytoskeleton organization	3.57E-03
51	GO:0006012: galactose metabolic process	4.60E-03
52	GO:0042147: retrograde transport, endosome to Golgi	5.15E-03
53	GO:0045489: pectin biosynthetic process	5.72E-03
54	GO:0048544: recognition of pollen	6.01E-03
55	GO:0019252: starch biosynthetic process	6.31E-03
56	GO:0006623: protein targeting to vacuole	6.31E-03
57	GO:0006891: intra-Golgi vesicle-mediated transport	6.61E-03
58	GO:0009630: gravitropism	6.92E-03
59	GO:0007264: small GTPase mediated signal transduction	6.92E-03
60	GO:0010286: heat acclimation	7.88E-03
61	GO:0009816: defense response to bacterium, incompatible interaction	8.88E-03
62	GO:0055114: oxidation-reduction process	8.95E-03
63	GO:0006888: ER to Golgi vesicle-mediated transport	9.57E-03
64	GO:0008219: cell death	1.03E-02
65	GO:0048767: root hair elongation	1.07E-02
66	GO:0006811: ion transport	1.10E-02
67	GO:0006499: N-terminal protein myristoylation	1.10E-02
68	GO:0006865: amino acid transport	1.18E-02
69	GO:0009853: photorespiration	1.22E-02
70	GO:0048364: root development	1.24E-02
71	GO:0006839: mitochondrial transport	1.33E-02
72	GO:0009640: photomorphogenesis	1.45E-02
73	GO:0010114: response to red light	1.45E-02
74	GO:0009636: response to toxic substance	1.58E-02
75	GO:0048367: shoot system development	2.07E-02
76	GO:0009626: plant-type hypersensitive response	2.12E-02
77	GO:0006396: RNA processing	2.36E-02
78	GO:0006457: protein folding	2.74E-02
79	GO:0009845: seed germination	2.86E-02
80	GO:0009790: embryo development	3.02E-02
81	GO:0006633: fatty acid biosynthetic process	3.19E-02
82	GO:0040008: regulation of growth	3.30E-02
83	GO:0010228: vegetative to reproductive phase transition of meristem	3.52E-02
84	GO:0006470: protein dephosphorylation	3.75E-02
85	GO:0008380: RNA splicing	3.86E-02
86	GO:0009826: unidimensional cell growth	4.52E-02
87	GO:0009733: response to auxin	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0004798: thymidylate kinase activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0019211: phosphatase activator activity	0.00E+00
5	GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	0.00E+00
6	GO:0015197: peptide transporter activity	0.00E+00
7	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
8	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	6.42E-05
9	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	6.42E-05
10	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	6.42E-05
11	GO:0052595: aliphatic-amine oxidase activity	6.42E-05
12	GO:0000170: sphingosine hydroxylase activity	6.42E-05
13	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	6.42E-05
14	GO:0030544: Hsp70 protein binding	6.42E-05
15	GO:0042937: tripeptide transporter activity	1.55E-04
16	GO:0047209: coniferyl-alcohol glucosyltransferase activity	1.55E-04
17	GO:0004566: beta-glucuronidase activity	1.55E-04
18	GO:0042284: sphingolipid delta-4 desaturase activity	1.55E-04
19	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.63E-04
20	GO:0008430: selenium binding	2.63E-04
21	GO:0030527: structural constituent of chromatin	3.82E-04
22	GO:0003878: ATP citrate synthase activity	3.82E-04
23	GO:0009041: uridylate kinase activity	3.82E-04
24	GO:0016004: phospholipase activator activity	5.10E-04
25	GO:0015204: urea transmembrane transporter activity	5.10E-04
26	GO:0004834: tryptophan synthase activity	5.10E-04
27	GO:0042936: dipeptide transporter activity	5.10E-04
28	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.10E-04
29	GO:0008198: ferrous iron binding	6.45E-04
30	GO:0005496: steroid binding	6.45E-04
31	GO:0005471: ATP:ADP antiporter activity	6.45E-04
32	GO:0005459: UDP-galactose transmembrane transporter activity	6.45E-04
33	GO:0035252: UDP-xylosyltransferase activity	7.90E-04
34	GO:0004747: ribokinase activity	9.40E-04
35	GO:0030246: carbohydrate binding	1.02E-03
36	GO:0008865: fructokinase activity	1.26E-03
37	GO:0004525: ribonuclease III activity	1.26E-03
38	GO:0004034: aldose 1-epimerase activity	1.26E-03
39	GO:0008142: oxysterol binding	1.44E-03
40	GO:0045309: protein phosphorylated amino acid binding	1.81E-03
41	GO:0008794: arsenate reductase (glutaredoxin) activity	2.21E-03
42	GO:0019904: protein domain specific binding	2.21E-03
43	GO:0004521: endoribonuclease activity	2.42E-03
44	GO:0008131: primary amine oxidase activity	2.87E-03
45	GO:0003756: protein disulfide isomerase activity	4.87E-03
46	GO:0010181: FMN binding	6.01E-03
47	GO:0016853: isomerase activity	6.01E-03
48	GO:0004872: receptor activity	6.31E-03
49	GO:0048038: quinone binding	6.61E-03
50	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.24E-03
51	GO:0005200: structural constituent of cytoskeleton	7.88E-03
52	GO:0051213: dioxygenase activity	8.54E-03
53	GO:0005506: iron ion binding	9.08E-03
54	GO:0003993: acid phosphatase activity	1.25E-02
55	GO:0000149: SNARE binding	1.29E-02
56	GO:0005484: SNAP receptor activity	1.45E-02
57	GO:0015293: symporter activity	1.58E-02
58	GO:0020037: heme binding	1.65E-02
59	GO:0015171: amino acid transmembrane transporter activity	1.93E-02
60	GO:0045735: nutrient reservoir activity	2.02E-02
61	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.16E-02
62	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.16E-02
63	GO:0015035: protein disulfide oxidoreductase activity	2.36E-02
64	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.76E-02
65	GO:0005507: copper ion binding	3.01E-02
66	GO:0005525: GTP binding	3.48E-02
67	GO:0008194: UDP-glycosyltransferase activity	3.69E-02
68	GO:0042802: identical protein binding	4.04E-02
69	GO:0046982: protein heterodimerization activity	4.58E-02
70	GO:0003824: catalytic activity	4.68E-02
71	GO:0016788: hydrolase activity, acting on ester bonds	4.71E-02
72	GO:0003682: chromatin binding	4.83E-02
73	GO:0016301: kinase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	2.90E-06
2	GO:0005886: plasma membrane	1.85E-05
3	GO:0005794: Golgi apparatus	6.67E-05
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.63E-04
5	GO:0009346: citrate lyase complex	3.82E-04
6	GO:0030140: trans-Golgi network transport vesicle	7.90E-04
7	GO:0005774: vacuolar membrane	8.35E-04
8	GO:0000325: plant-type vacuole	9.34E-04
9	GO:0030173: integral component of Golgi membrane	9.40E-04
10	GO:0005783: endoplasmic reticulum	9.56E-04
11	GO:0012507: ER to Golgi transport vesicle membrane	1.26E-03
12	GO:0005802: trans-Golgi network	1.33E-03
13	GO:0005779: integral component of peroxisomal membrane	1.44E-03
14	GO:0016604: nuclear body	1.81E-03
15	GO:0010008: endosome membrane	2.11E-03
16	GO:0005765: lysosomal membrane	2.21E-03
17	GO:0030176: integral component of endoplasmic reticulum membrane	3.09E-03
18	GO:0045271: respiratory chain complex I	3.82E-03
19	GO:0005770: late endosome	5.72E-03
20	GO:0005773: vacuole	6.90E-03
21	GO:0000785: chromatin	6.92E-03
22	GO:0005778: peroxisomal membrane	7.88E-03
23	GO:0005768: endosome	8.11E-03
24	GO:0009506: plasmodesma	1.16E-02
25	GO:0000786: nucleosome	1.18E-02
26	GO:0031902: late endosome membrane	1.37E-02
27	GO:0031201: SNARE complex	1.37E-02
28	GO:0005856: cytoskeleton	1.58E-02
29	GO:0005789: endoplasmic reticulum membrane	1.59E-02
30	GO:0031966: mitochondrial membrane	1.71E-02
31	GO:0005635: nuclear envelope	1.89E-02
32	GO:0005747: mitochondrial respiratory chain complex I	2.07E-02
33	GO:0005654: nucleoplasm	2.66E-02
34	GO:0009705: plant-type vacuole membrane	3.41E-02