co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G22845

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010360: negative regulation of anion channel activity	0.00E+00
2	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
3	GO:0045185: maintenance of protein location	0.00E+00
4	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
5	GO:0019483: beta-alanine biosynthetic process	4.01E-07
6	GO:0006212: uracil catabolic process	4.01E-07
7	GO:0043562: cellular response to nitrogen levels	5.38E-07
8	GO:0000302: response to reactive oxygen species	3.14E-05
9	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.50E-05
10	GO:1902361: mitochondrial pyruvate transmembrane transport	8.61E-05
11	GO:0006643: membrane lipid metabolic process	8.61E-05
12	GO:0080120: CAAX-box protein maturation	8.61E-05
13	GO:0071586: CAAX-box protein processing	8.61E-05
14	GO:0080173: male-female gamete recognition during double fertilization	8.61E-05
15	GO:0006481: C-terminal protein methylation	8.61E-05
16	GO:0031349: positive regulation of defense response	2.04E-04
17	GO:0006850: mitochondrial pyruvate transport	2.04E-04
18	GO:0015914: phospholipid transport	2.04E-04
19	GO:0019521: D-gluconate metabolic process	2.04E-04
20	GO:0080147: root hair cell development	2.63E-04
21	GO:0010359: regulation of anion channel activity	3.42E-04
22	GO:0060548: negative regulation of cell death	6.55E-04
23	GO:0046345: abscisic acid catabolic process	6.55E-04
24	GO:0009816: defense response to bacterium, incompatible interaction	9.62E-04
25	GO:1902456: regulation of stomatal opening	1.01E-03
26	GO:0006796: phosphate-containing compound metabolic process	1.01E-03
27	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.01E-03
28	GO:0015031: protein transport	1.13E-03
29	GO:0009612: response to mechanical stimulus	1.20E-03
30	GO:0000911: cytokinesis by cell plate formation	1.20E-03
31	GO:0010119: regulation of stomatal movement	1.35E-03
32	GO:0050790: regulation of catalytic activity	1.41E-03
33	GO:0010044: response to aluminum ion	1.41E-03
34	GO:0046470: phosphatidylcholine metabolic process	1.41E-03
35	GO:0009395: phospholipid catabolic process	1.41E-03
36	GO:0006099: tricarboxylic acid cycle	1.54E-03
37	GO:2000070: regulation of response to water deprivation	1.63E-03
38	GO:0006102: isocitrate metabolic process	1.63E-03
39	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.63E-03
40	GO:0009699: phenylpropanoid biosynthetic process	1.86E-03
41	GO:0010200: response to chitin	1.92E-03
42	GO:0046777: protein autophosphorylation	2.00E-03
43	GO:0044550: secondary metabolite biosynthetic process	2.04E-03
44	GO:0006098: pentose-phosphate shunt	2.10E-03
45	GO:0009737: response to abscisic acid	2.80E-03
46	GO:0006468: protein phosphorylation	2.86E-03
47	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.15E-03
48	GO:0006807: nitrogen compound metabolic process	3.43E-03
49	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	3.43E-03
50	GO:0018105: peptidyl-serine phosphorylation	3.70E-03
51	GO:0055114: oxidation-reduction process	3.75E-03
52	GO:0006508: proteolysis	5.31E-03
53	GO:0009814: defense response, incompatible interaction	5.66E-03
54	GO:0030433: ubiquitin-dependent ERAD pathway	5.66E-03
55	GO:0031348: negative regulation of defense response	5.66E-03
56	GO:0009738: abscisic acid-activated signaling pathway	5.97E-03
57	GO:0006012: galactose metabolic process	6.01E-03
58	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.73E-03
59	GO:0009617: response to bacterium	7.37E-03
60	GO:0010197: polar nucleus fusion	7.48E-03
61	GO:0061025: membrane fusion	7.87E-03
62	GO:0006623: protein targeting to vacuole	8.26E-03
63	GO:0006904: vesicle docking involved in exocytosis	1.03E-02
64	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.17E-02
65	GO:0016192: vesicle-mediated transport	1.25E-02
66	GO:0009813: flavonoid biosynthetic process	1.40E-02
67	GO:0045454: cell redox homeostasis	1.42E-02
68	GO:0006886: intracellular protein transport	1.47E-02
69	GO:0009408: response to heat	1.76E-02
70	GO:0006887: exocytosis	1.81E-02
71	GO:0051707: response to other organism	1.92E-02
72	GO:0000209: protein polyubiquitination	1.97E-02
73	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.19E-02
74	GO:0009846: pollen germination	2.25E-02
75	GO:0051603: proteolysis involved in cellular protein catabolic process	2.43E-02
76	GO:0048367: shoot system development	2.73E-02
77	GO:0035556: intracellular signal transduction	3.29E-02
78	GO:0016036: cellular response to phosphate starvation	4.27E-02
79	GO:0016310: phosphorylation	4.66E-02
80	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.86E-02
81	GO:0006470: protein dephosphorylation	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0004157: dihydropyrimidinase activity	0.00E+00
2	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
3	GO:0052642: lysophosphatidic acid phosphatase activity	0.00E+00
4	GO:0003837: beta-ureidopropionase activity	0.00E+00
5	GO:0004656: procollagen-proline 4-dioxygenase activity	2.53E-05
6	GO:0016920: pyroglutamyl-peptidase activity	8.61E-05
7	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	8.61E-05
8	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	8.61E-05
9	GO:0050833: pyruvate transmembrane transporter activity	3.42E-04
10	GO:0008430: selenium binding	3.42E-04
11	GO:0004449: isocitrate dehydrogenase (NAD+) activity	4.92E-04
12	GO:0008276: protein methyltransferase activity	4.92E-04
13	GO:0005496: steroid binding	8.29E-04
14	GO:0045431: flavonol synthase activity	8.29E-04
15	GO:0010294: abscisic acid glucosyltransferase activity	8.29E-04
16	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	8.29E-04
17	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.01E-03
18	GO:0036402: proteasome-activating ATPase activity	1.01E-03
19	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.01E-03
20	GO:0004866: endopeptidase inhibitor activity	1.01E-03
21	GO:0004683: calmodulin-dependent protein kinase activity	1.07E-03
22	GO:0004674: protein serine/threonine kinase activity	1.07E-03
23	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.20E-03
24	GO:0051920: peroxiredoxin activity	1.20E-03
25	GO:0008320: protein transmembrane transporter activity	1.41E-03
26	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.48E-03
27	GO:0016209: antioxidant activity	1.63E-03
28	GO:0004034: aldose 1-epimerase activity	1.63E-03
29	GO:0004630: phospholipase D activity	1.86E-03
30	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.86E-03
31	GO:0016301: kinase activity	2.04E-03
32	GO:0071949: FAD binding	2.10E-03
33	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.35E-03
34	GO:0008171: O-methyltransferase activity	2.61E-03
35	GO:0004129: cytochrome-c oxidase activity	2.87E-03
36	GO:0005543: phospholipid binding	2.87E-03
37	GO:0005509: calcium ion binding	3.04E-03
38	GO:0016746: transferase activity, transferring acyl groups	3.70E-03
39	GO:0031624: ubiquitin conjugating enzyme binding	3.73E-03
40	GO:0004175: endopeptidase activity	3.73E-03
41	GO:0017025: TBP-class protein binding	4.03E-03
42	GO:0004190: aspartic-type endopeptidase activity	4.03E-03
43	GO:0031418: L-ascorbic acid binding	4.65E-03
44	GO:0003954: NADH dehydrogenase activity	4.65E-03
45	GO:0033612: receptor serine/threonine kinase binding	5.32E-03
46	GO:0004672: protein kinase activity	6.15E-03
47	GO:0020037: heme binding	6.86E-03
48	GO:0016853: isomerase activity	7.87E-03
49	GO:0004197: cysteine-type endopeptidase activity	9.07E-03
50	GO:0005516: calmodulin binding	1.05E-02
51	GO:0008233: peptidase activity	1.17E-02
52	GO:0061630: ubiquitin protein ligase activity	1.25E-02
53	GO:0008236: serine-type peptidase activity	1.31E-02
54	GO:0004222: metalloendopeptidase activity	1.45E-02
55	GO:0005506: iron ion binding	1.49E-02
56	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.54E-02
57	GO:0003993: acid phosphatase activity	1.65E-02
58	GO:0004364: glutathione transferase activity	1.86E-02
59	GO:0005484: SNAP receptor activity	1.92E-02
60	GO:0051287: NAD binding	2.19E-02
61	GO:0016298: lipase activity	2.43E-02
62	GO:0005524: ATP binding	2.51E-02
63	GO:0008234: cysteine-type peptidase activity	2.55E-02
64	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.85E-02
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.85E-02
66	GO:0022857: transmembrane transporter activity	2.92E-02
67	GO:0008565: protein transporter activity	4.06E-02
68	GO:0019825: oxygen binding	4.43E-02
69	GO:0008194: UDP-glycosyltransferase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005783: endoplasmic reticulum	7.41E-06
3	GO:0016020: membrane	6.07E-05
4	GO:0030134: ER to Golgi transport vesicle	2.04E-04
5	GO:0005901: caveola	2.04E-04
6	GO:0031304: intrinsic component of mitochondrial inner membrane	2.04E-04
7	GO:0005886: plasma membrane	3.06E-04
8	GO:0005782: peroxisomal matrix	3.42E-04
9	GO:0005789: endoplasmic reticulum membrane	3.57E-04
10	GO:0030658: transport vesicle membrane	4.92E-04
11	GO:0070062: extracellular exosome	4.92E-04
12	GO:0030660: Golgi-associated vesicle membrane	6.55E-04
13	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	6.55E-04
14	GO:0005746: mitochondrial respiratory chain	8.29E-04
15	GO:0000164: protein phosphatase type 1 complex	8.29E-04
16	GO:0031597: cytosolic proteasome complex	1.20E-03
17	GO:0031595: nuclear proteasome complex	1.41E-03
18	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.63E-03
19	GO:0031305: integral component of mitochondrial inner membrane	1.63E-03
20	GO:0045273: respiratory chain complex II	1.63E-03
21	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.63E-03
22	GO:0008540: proteasome regulatory particle, base subcomplex	2.35E-03
23	GO:0017119: Golgi transport complex	2.61E-03
24	GO:0005765: lysosomal membrane	2.87E-03
25	GO:0005764: lysosome	3.73E-03
26	GO:0030176: integral component of endoplasmic reticulum membrane	4.03E-03
27	GO:0005794: Golgi apparatus	6.59E-03
28	GO:0005777: peroxisome	7.41E-03
29	GO:0016021: integral component of membrane	8.23E-03
30	GO:0009504: cell plate	8.26E-03
31	GO:0000145: exocyst	9.07E-03
32	GO:0005829: cytosol	9.58E-03
33	GO:0032580: Golgi cisterna membrane	9.91E-03
34	GO:0005802: trans-Golgi network	1.13E-02
35	GO:0005768: endosome	1.33E-02
36	GO:0000151: ubiquitin ligase complex	1.35E-02
37	GO:0005773: vacuole	1.37E-02
38	GO:0031902: late endosome membrane	1.81E-02
39	GO:0000139: Golgi membrane	2.23E-02
40	GO:0000502: proteasome complex	2.37E-02
41	GO:0012505: endomembrane system	2.98E-02
42	GO:0005623: cell	3.64E-02
43	GO:0009535: chloroplast thylakoid membrane	4.17E-02
44	GO:0005737: cytoplasm	4.79E-02
45	GO:0005615: extracellular space	4.86E-02