GO Enrichment Analysis of Co-expressed Genes with
AT3G22660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 2 | GO:0010636: positive regulation of mitochondrial fusion | 0.00E+00 |
| 3 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 4 | GO:0048312: intracellular distribution of mitochondria | 0.00E+00 |
| 5 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 6 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.48E-04 |
| 7 | GO:0017006: protein-tetrapyrrole linkage | 2.51E-04 |
| 8 | GO:0009584: detection of visible light | 3.65E-04 |
| 9 | GO:0033320: UDP-D-xylose biosynthetic process | 4.88E-04 |
| 10 | GO:0042273: ribosomal large subunit biogenesis | 4.88E-04 |
| 11 | GO:0018279: protein N-linked glycosylation via asparagine | 6.19E-04 |
| 12 | GO:0005513: detection of calcium ion | 6.19E-04 |
| 13 | GO:0007029: endoplasmic reticulum organization | 6.19E-04 |
| 14 | GO:0042732: D-xylose metabolic process | 7.57E-04 |
| 15 | GO:0009267: cellular response to starvation | 7.57E-04 |
| 16 | GO:0009612: response to mechanical stimulus | 9.01E-04 |
| 17 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.01E-04 |
| 18 | GO:0009423: chorismate biosynthetic process | 9.01E-04 |
| 19 | GO:0006099: tricarboxylic acid cycle | 9.99E-04 |
| 20 | GO:0006102: isocitrate metabolic process | 1.21E-03 |
| 21 | GO:0006491: N-glycan processing | 1.21E-03 |
| 22 | GO:0009699: phenylpropanoid biosynthetic process | 1.38E-03 |
| 23 | GO:0006995: cellular response to nitrogen starvation | 1.92E-03 |
| 24 | GO:0009073: aromatic amino acid family biosynthetic process | 2.12E-03 |
| 25 | GO:0030148: sphingolipid biosynthetic process | 2.12E-03 |
| 26 | GO:0006913: nucleocytoplasmic transport | 2.12E-03 |
| 27 | GO:0009682: induced systemic resistance | 2.12E-03 |
| 28 | GO:0006415: translational termination | 2.12E-03 |
| 29 | GO:0071365: cellular response to auxin stimulus | 2.32E-03 |
| 30 | GO:0006396: RNA processing | 2.36E-03 |
| 31 | GO:0010588: cotyledon vascular tissue pattern formation | 2.52E-03 |
| 32 | GO:0048467: gynoecium development | 2.74E-03 |
| 33 | GO:0010143: cutin biosynthetic process | 2.74E-03 |
| 34 | GO:0009969: xyloglucan biosynthetic process | 2.96E-03 |
| 35 | GO:0009225: nucleotide-sugar metabolic process | 2.96E-03 |
| 36 | GO:0010025: wax biosynthetic process | 3.18E-03 |
| 37 | GO:0000162: tryptophan biosynthetic process | 3.18E-03 |
| 38 | GO:0034976: response to endoplasmic reticulum stress | 3.18E-03 |
| 39 | GO:0010150: leaf senescence | 3.93E-03 |
| 40 | GO:0016226: iron-sulfur cluster assembly | 4.15E-03 |
| 41 | GO:0010017: red or far-red light signaling pathway | 4.15E-03 |
| 42 | GO:0009693: ethylene biosynthetic process | 4.40E-03 |
| 43 | GO:0009306: protein secretion | 4.65E-03 |
| 44 | GO:0009617: response to bacterium | 4.68E-03 |
| 45 | GO:0000413: protein peptidyl-prolyl isomerization | 5.19E-03 |
| 46 | GO:0006885: regulation of pH | 5.46E-03 |
| 47 | GO:0010305: leaf vascular tissue pattern formation | 5.46E-03 |
| 48 | GO:0010583: response to cyclopentenone | 6.61E-03 |
| 49 | GO:0006904: vesicle docking involved in exocytosis | 7.52E-03 |
| 50 | GO:0018298: protein-chromophore linkage | 9.82E-03 |
| 51 | GO:0008219: cell death | 9.82E-03 |
| 52 | GO:0009407: toxin catabolic process | 1.05E-02 |
| 53 | GO:0007568: aging | 1.09E-02 |
| 54 | GO:0006631: fatty acid metabolic process | 1.31E-02 |
| 55 | GO:0009636: response to toxic substance | 1.51E-02 |
| 56 | GO:0006812: cation transport | 1.63E-02 |
| 57 | GO:0009664: plant-type cell wall organization | 1.63E-02 |
| 58 | GO:0006364: rRNA processing | 1.71E-02 |
| 59 | GO:0009585: red, far-red light phototransduction | 1.71E-02 |
| 60 | GO:0006813: potassium ion transport | 1.71E-02 |
| 61 | GO:0006096: glycolytic process | 1.93E-02 |
| 62 | GO:0048367: shoot system development | 1.97E-02 |
| 63 | GO:0018105: peptidyl-serine phosphorylation | 2.25E-02 |
| 64 | GO:0006457: protein folding | 2.56E-02 |
| 65 | GO:0009790: embryo development | 2.88E-02 |
| 66 | GO:0006633: fatty acid biosynthetic process | 3.04E-02 |
| 67 | GO:0040008: regulation of growth | 3.14E-02 |
| 68 | GO:0009451: RNA modification | 3.30E-02 |
| 69 | GO:0009826: unidimensional cell growth | 4.31E-02 |
| 70 | GO:0042254: ribosome biogenesis | 4.49E-02 |
| 71 | GO:0048366: leaf development | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 2 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 6.10E-05 |
| 3 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 6.10E-05 |
| 4 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 6.10E-05 |
| 5 | GO:0045140: inositol phosphoceramide synthase activity | 1.48E-04 |
| 6 | GO:0009883: red or far-red light photoreceptor activity | 1.48E-04 |
| 7 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 1.48E-04 |
| 8 | GO:0008020: G-protein coupled photoreceptor activity | 2.51E-04 |
| 9 | GO:0070181: small ribosomal subunit rRNA binding | 2.51E-04 |
| 10 | GO:0003723: RNA binding | 2.85E-04 |
| 11 | GO:0016149: translation release factor activity, codon specific | 3.65E-04 |
| 12 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.65E-04 |
| 13 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 6.19E-04 |
| 14 | GO:0003729: mRNA binding | 6.66E-04 |
| 15 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 7.57E-04 |
| 16 | GO:0048040: UDP-glucuronate decarboxylase activity | 7.57E-04 |
| 17 | GO:0070403: NAD+ binding | 9.01E-04 |
| 18 | GO:0102391: decanoate--CoA ligase activity | 9.01E-04 |
| 19 | GO:0003676: nucleic acid binding | 1.02E-03 |
| 20 | GO:0008143: poly(A) binding | 1.05E-03 |
| 21 | GO:0043295: glutathione binding | 1.05E-03 |
| 22 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.05E-03 |
| 23 | GO:0009881: photoreceptor activity | 1.05E-03 |
| 24 | GO:0008173: RNA methyltransferase activity | 1.38E-03 |
| 25 | GO:0003747: translation release factor activity | 1.55E-03 |
| 26 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.62E-03 |
| 27 | GO:0030955: potassium ion binding | 1.73E-03 |
| 28 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.73E-03 |
| 29 | GO:0004743: pyruvate kinase activity | 1.73E-03 |
| 30 | GO:0001054: RNA polymerase I activity | 2.12E-03 |
| 31 | GO:0008026: ATP-dependent helicase activity | 2.43E-03 |
| 32 | GO:0000155: phosphorelay sensor kinase activity | 2.52E-03 |
| 33 | GO:0051536: iron-sulfur cluster binding | 3.42E-03 |
| 34 | GO:0003756: protein disulfide isomerase activity | 4.65E-03 |
| 35 | GO:0005451: monovalent cation:proton antiporter activity | 5.19E-03 |
| 36 | GO:0001085: RNA polymerase II transcription factor binding | 5.46E-03 |
| 37 | GO:0016853: isomerase activity | 5.74E-03 |
| 38 | GO:0015299: solute:proton antiporter activity | 5.74E-03 |
| 39 | GO:0015385: sodium:proton antiporter activity | 6.91E-03 |
| 40 | GO:0051213: dioxygenase activity | 8.16E-03 |
| 41 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 8.81E-03 |
| 42 | GO:0004004: ATP-dependent RNA helicase activity | 9.14E-03 |
| 43 | GO:0004683: calmodulin-dependent protein kinase activity | 9.14E-03 |
| 44 | GO:0042803: protein homodimerization activity | 9.43E-03 |
| 45 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.09E-02 |
| 46 | GO:0008422: beta-glucosidase activity | 1.23E-02 |
| 47 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.27E-02 |
| 48 | GO:0004364: glutathione transferase activity | 1.35E-02 |
| 49 | GO:0005524: ATP binding | 1.52E-02 |
| 50 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.55E-02 |
| 51 | GO:0015171: amino acid transmembrane transporter activity | 1.84E-02 |
| 52 | GO:0016746: transferase activity, transferring acyl groups | 2.25E-02 |
| 53 | GO:0004386: helicase activity | 2.34E-02 |
| 54 | GO:0005507: copper ion binding | 2.82E-02 |
| 55 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.83E-02 |
| 56 | GO:0008565: protein transporter activity | 2.94E-02 |
| 57 | GO:0005516: calmodulin binding | 2.98E-02 |
| 58 | GO:0005509: calcium ion binding | 3.69E-02 |
| 59 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.85E-02 |
| 60 | GO:0042802: identical protein binding | 3.85E-02 |
| 61 | GO:0000287: magnesium ion binding | 4.37E-02 |
| 62 | GO:0003682: chromatin binding | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045252: oxoglutarate dehydrogenase complex | 6.10E-05 |
| 2 | GO:0005774: vacuolar membrane | 1.60E-04 |
| 3 | GO:0005829: cytosol | 3.43E-04 |
| 4 | GO:0008250: oligosaccharyltransferase complex | 6.19E-04 |
| 5 | GO:0030687: preribosome, large subunit precursor | 1.05E-03 |
| 6 | GO:0010494: cytoplasmic stress granule | 1.55E-03 |
| 7 | GO:0005736: DNA-directed RNA polymerase I complex | 1.55E-03 |
| 8 | GO:0032040: small-subunit processome | 2.32E-03 |
| 9 | GO:0005783: endoplasmic reticulum | 2.90E-03 |
| 10 | GO:0005730: nucleolus | 3.79E-03 |
| 11 | GO:0032580: Golgi cisterna membrane | 7.21E-03 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 8.48E-03 |
| 13 | GO:0005667: transcription factor complex | 8.81E-03 |
| 14 | GO:0005618: cell wall | 1.37E-02 |
| 15 | GO:0005794: Golgi apparatus | 1.81E-02 |
| 16 | GO:0005747: mitochondrial respiratory chain complex I | 1.97E-02 |
| 17 | GO:0005773: vacuole | 2.13E-02 |
| 18 | GO:0016020: membrane | 2.69E-02 |
| 19 | GO:0009506: plasmodesma | 2.94E-02 |
| 20 | GO:0005802: trans-Golgi network | 3.17E-02 |
| 21 | GO:0046658: anchored component of plasma membrane | 3.97E-02 |
| 22 | GO:0009505: plant-type cell wall | 4.99E-02 |