co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G22630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0070328: triglyceride homeostasis	0.00E+00
3	GO:0042430: indole-containing compound metabolic process	0.00E+00
4	GO:0055091: phospholipid homeostasis	0.00E+00
5	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
6	GO:0009626: plant-type hypersensitive response	1.53E-05
7	GO:0009609: response to symbiotic bacterium	7.23E-05
8	GO:0009270: response to humidity	7.23E-05
9	GO:0060862: negative regulation of floral organ abscission	7.23E-05
10	GO:0080093: regulation of photorespiration	7.23E-05
11	GO:0048448: stamen morphogenesis	7.23E-05
12	GO:0031998: regulation of fatty acid beta-oxidation	7.23E-05
13	GO:0010450: inflorescence meristem growth	7.23E-05
14	GO:0006099: tricarboxylic acid cycle	9.13E-05
15	GO:0009266: response to temperature stimulus	1.45E-04
16	GO:0031349: positive regulation of defense response	1.74E-04
17	GO:0019725: cellular homeostasis	1.74E-04
18	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	1.74E-04
19	GO:0055088: lipid homeostasis	1.74E-04
20	GO:0048833: specification of floral organ number	1.74E-04
21	GO:0006825: copper ion transport	2.30E-04
22	GO:0010581: regulation of starch biosynthetic process	2.93E-04
23	GO:0055074: calcium ion homeostasis	2.93E-04
24	GO:0045793: positive regulation of cell size	2.93E-04
25	GO:0010186: positive regulation of cellular defense response	2.93E-04
26	GO:0001676: long-chain fatty acid metabolic process	4.23E-04
27	GO:0055089: fatty acid homeostasis	4.23E-04
28	GO:0043207: response to external biotic stimulus	4.23E-04
29	GO:0010193: response to ozone	5.15E-04
30	GO:0000956: nuclear-transcribed mRNA catabolic process	5.65E-04
31	GO:0006878: cellular copper ion homeostasis	5.65E-04
32	GO:0060548: negative regulation of cell death	5.65E-04
33	GO:0009652: thigmotropism	5.65E-04
34	GO:0045727: positive regulation of translation	5.65E-04
35	GO:0030163: protein catabolic process	5.83E-04
36	GO:0006544: glycine metabolic process	7.14E-04
37	GO:0046283: anthocyanin-containing compound metabolic process	7.14E-04
38	GO:0006097: glyoxylate cycle	7.14E-04
39	GO:0015031: protein transport	7.56E-04
40	GO:0009617: response to bacterium	7.67E-04
41	GO:0018258: protein O-linked glycosylation via hydroxyproline	8.73E-04
42	GO:0010942: positive regulation of cell death	8.73E-04
43	GO:0006563: L-serine metabolic process	8.73E-04
44	GO:0010405: arabinogalactan protein metabolic process	8.73E-04
45	GO:0009612: response to mechanical stimulus	1.04E-03
46	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.21E-03
47	GO:0009610: response to symbiotic fungus	1.21E-03
48	GO:1900056: negative regulation of leaf senescence	1.21E-03
49	GO:0006457: protein folding	1.22E-03
50	GO:0006511: ubiquitin-dependent protein catabolic process	1.32E-03
51	GO:0006605: protein targeting	1.40E-03
52	GO:0050821: protein stabilization	1.40E-03
53	GO:0006102: isocitrate metabolic process	1.40E-03
54	GO:0051707: response to other organism	1.51E-03
55	GO:0010204: defense response signaling pathway, resistance gene-independent	1.59E-03
56	GO:0009880: embryonic pattern specification	1.59E-03
57	GO:0046916: cellular transition metal ion homeostasis	1.80E-03
58	GO:0098656: anion transmembrane transport	1.80E-03
59	GO:0046685: response to arsenic-containing substance	1.80E-03
60	GO:0009051: pentose-phosphate shunt, oxidative branch	1.80E-03
61	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.01E-03
62	GO:0035999: tetrahydrofolate interconversion	2.01E-03
63	GO:0009299: mRNA transcription	2.23E-03
64	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.23E-03
65	GO:0051555: flavonol biosynthetic process	2.23E-03
66	GO:0009408: response to heat	2.24E-03
67	GO:0006913: nucleocytoplasmic transport	2.46E-03
68	GO:0006820: anion transport	2.70E-03
69	GO:0006626: protein targeting to mitochondrion	2.94E-03
70	GO:0006108: malate metabolic process	2.94E-03
71	GO:0006006: glucose metabolic process	2.94E-03
72	GO:0046688: response to copper ion	3.44E-03
73	GO:0034976: response to endoplasmic reticulum stress	3.71E-03
74	GO:0015992: proton transport	4.54E-03
75	GO:0009814: defense response, incompatible interaction	4.83E-03
76	GO:0007005: mitochondrion organization	4.83E-03
77	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	5.49E-03
78	GO:0070417: cellular response to cold	5.74E-03
79	GO:0006606: protein import into nucleus	6.05E-03
80	GO:0009646: response to absence of light	6.70E-03
81	GO:0008654: phospholipid biosynthetic process	7.04E-03
82	GO:0006891: intra-Golgi vesicle-mediated transport	7.38E-03
83	GO:0032502: developmental process	7.72E-03
84	GO:0007264: small GTPase mediated signal transduction	7.72E-03
85	GO:0010286: heat acclimation	8.79E-03
86	GO:0001666: response to hypoxia	9.54E-03
87	GO:0006952: defense response	9.86E-03
88	GO:0009627: systemic acquired resistance	1.03E-02
89	GO:0006888: ER to Golgi vesicle-mediated transport	1.07E-02
90	GO:0006979: response to oxidative stress	1.15E-02
91	GO:0006886: intracellular protein transport	1.16E-02
92	GO:0055114: oxidation-reduction process	1.31E-02
93	GO:0009853: photorespiration	1.36E-02
94	GO:0030001: metal ion transport	1.49E-02
95	GO:0008152: metabolic process	1.54E-02
96	GO:0006631: fatty acid metabolic process	1.54E-02
97	GO:0008283: cell proliferation	1.63E-02
98	GO:0009409: response to cold	1.67E-02
99	GO:0006468: protein phosphorylation	1.75E-02
100	GO:0009965: leaf morphogenesis	1.77E-02
101	GO:0006486: protein glycosylation	2.01E-02
102	GO:0009909: regulation of flower development	2.16E-02
103	GO:0009738: abscisic acid-activated signaling pathway	2.40E-02
104	GO:0009620: response to fungus	2.42E-02
105	GO:0035556: intracellular signal transduction	2.62E-02
106	GO:0018105: peptidyl-serine phosphorylation	2.64E-02
107	GO:0007275: multicellular organism development	2.66E-02
108	GO:0000398: mRNA splicing, via spliceosome	2.86E-02
109	GO:0006633: fatty acid biosynthetic process	3.56E-02
110	GO:0040008: regulation of growth	3.69E-02
111	GO:0007166: cell surface receptor signaling pathway	4.19E-02
112	GO:0042742: defense response to bacterium	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	0.00E+00
2	GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity	0.00E+00
3	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
4	GO:0004298: threonine-type endopeptidase activity	6.50E-06
5	GO:0080042: ADP-glucose pyrophosphohydrolase activity	7.23E-05
6	GO:0051287: NAD binding	1.63E-04
7	GO:0017110: nucleoside-diphosphatase activity	1.74E-04
8	GO:0004338: glucan exo-1,3-beta-glucosidase activity	1.74E-04
9	GO:0004450: isocitrate dehydrogenase (NADP+) activity	1.74E-04
10	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.74E-04
11	GO:0008233: peptidase activity	1.78E-04
12	GO:0005093: Rab GDP-dissociation inhibitor activity	2.93E-04
13	GO:0016531: copper chaperone activity	2.93E-04
14	GO:0051082: unfolded protein binding	3.05E-04
15	GO:0016758: transferase activity, transferring hexosyl groups	3.95E-04
16	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.65E-04
17	GO:0004345: glucose-6-phosphate dehydrogenase activity	5.65E-04
18	GO:0008237: metallopeptidase activity	6.57E-04
19	GO:0004372: glycine hydroxymethyltransferase activity	7.14E-04
20	GO:0004623: phospholipase A2 activity	7.14E-04
21	GO:0047631: ADP-ribose diphosphatase activity	7.14E-04
22	GO:0000210: NAD+ diphosphatase activity	8.73E-04
23	GO:0016615: malate dehydrogenase activity	8.73E-04
24	GO:1990714: hydroxyproline O-galactosyltransferase activity	8.73E-04
25	GO:0102391: decanoate--CoA ligase activity	1.04E-03
26	GO:0030060: L-malate dehydrogenase activity	1.04E-03
27	GO:0004602: glutathione peroxidase activity	1.04E-03
28	GO:0004467: long-chain fatty acid-CoA ligase activity	1.21E-03
29	GO:0005544: calcium-dependent phospholipid binding	1.40E-03
30	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.40E-03
31	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.40E-03
32	GO:0015288: porin activity	1.40E-03
33	GO:0005507: copper ion binding	1.41E-03
34	GO:0046914: transition metal ion binding	1.59E-03
35	GO:0008308: voltage-gated anion channel activity	1.59E-03
36	GO:0005509: calcium ion binding	2.13E-03
37	GO:0004713: protein tyrosine kinase activity	2.23E-03
38	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.62E-03
39	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.62E-03
40	GO:0008378: galactosyltransferase activity	2.70E-03
41	GO:0031072: heat shock protein binding	2.94E-03
42	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.19E-03
43	GO:0008565: protein transporter activity	4.26E-03
44	GO:0043424: protein histidine kinase binding	4.26E-03
45	GO:0004540: ribonuclease activity	4.54E-03
46	GO:0035251: UDP-glucosyltransferase activity	4.54E-03
47	GO:0008810: cellulase activity	5.13E-03
48	GO:0003756: protein disulfide isomerase activity	5.43E-03
49	GO:0008194: UDP-glycosyltransferase activity	5.49E-03
50	GO:0008536: Ran GTPase binding	6.38E-03
51	GO:0046872: metal ion binding	7.99E-03
52	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.03E-02
53	GO:0030247: polysaccharide binding	1.07E-02
54	GO:0004683: calmodulin-dependent protein kinase activity	1.07E-02
55	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.15E-02
56	GO:0005096: GTPase activator activity	1.19E-02
57	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.27E-02
58	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.36E-02
59	GO:0050661: NADP binding	1.49E-02
60	GO:0009055: electron carrier activity	1.50E-02
61	GO:0043621: protein self-association	1.72E-02
62	GO:0016298: lipase activity	2.06E-02
63	GO:0031625: ubiquitin protein ligase binding	2.16E-02
64	GO:0016746: transferase activity, transferring acyl groups	2.64E-02
65	GO:0003735: structural constituent of ribosome	2.70E-02
66	GO:0030170: pyridoxal phosphate binding	3.26E-02
67	GO:0030246: carbohydrate binding	3.33E-02
68	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.63E-02

Rank	GO Term	Adjusted P value
1	GO:0019773: proteasome core complex, alpha-subunit complex	3.55E-07
2	GO:0005758: mitochondrial intermembrane space	4.61E-06
3	GO:0005886: plasma membrane	6.30E-06
4	GO:0005839: proteasome core complex	6.50E-06
5	GO:0000502: proteasome complex	9.48E-06
6	GO:0005774: vacuolar membrane	5.44E-05
7	GO:0031351: integral component of plastid membrane	7.23E-05
8	GO:0005829: cytosol	9.78E-05
9	GO:0005773: vacuole	1.90E-04
10	GO:0046861: glyoxysomal membrane	2.93E-04
11	GO:1990726: Lsm1-7-Pat1 complex	4.23E-04
12	GO:0005788: endoplasmic reticulum lumen	7.74E-04
13	GO:0048046: apoplast	1.26E-03
14	GO:0045273: respiratory chain complex II	1.40E-03
15	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.40E-03
16	GO:0005688: U6 snRNP	1.40E-03
17	GO:0046930: pore complex	1.59E-03
18	GO:0009514: glyoxysome	1.59E-03
19	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.59E-03
20	GO:0009507: chloroplast	2.15E-03
21	GO:0008541: proteasome regulatory particle, lid subcomplex	2.46E-03
22	GO:0005795: Golgi stack	3.44E-03
23	GO:0045271: respiratory chain complex I	4.26E-03
24	GO:0070469: respiratory chain	4.26E-03
25	GO:0015935: small ribosomal subunit	4.54E-03
26	GO:0005741: mitochondrial outer membrane	4.54E-03
27	GO:0009506: plasmodesma	5.47E-03
28	GO:0000785: chromatin	7.72E-03
29	GO:0005622: intracellular	9.61E-03
30	GO:0005737: cytoplasm	1.08E-02
31	GO:0000151: ubiquitin ligase complex	1.15E-02
32	GO:0015934: large ribosomal subunit	1.27E-02
33	GO:0005783: endoplasmic reticulum	1.47E-02
34	GO:0009536: plastid	1.47E-02
35	GO:0005739: mitochondrion	1.50E-02
36	GO:0031966: mitochondrial membrane	1.91E-02
37	GO:0005635: nuclear envelope	2.11E-02
38	GO:0005681: spliceosomal complex	2.26E-02
39	GO:0005747: mitochondrial respiratory chain complex I	2.31E-02
40	GO:0005732: small nucleolar ribonucleoprotein complex	2.75E-02
41	GO:0005777: peroxisome	2.84E-02
42	GO:0005623: cell	3.09E-02
43	GO:0009570: chloroplast stroma	4.04E-02
44	GO:0022627: cytosolic small ribosomal subunit	4.65E-02
45	GO:0046658: anchored component of plasma membrane	4.65E-02