GO Enrichment Analysis of Co-expressed Genes with
AT3G22310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031564: transcription antitermination | 0.00E+00 |
| 2 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 5 | GO:0017126: nucleologenesis | 0.00E+00 |
| 6 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 7 | GO:0006422: aspartyl-tRNA aminoacylation | 2.19E-05 |
| 8 | GO:0006423: cysteinyl-tRNA aminoacylation | 5.64E-05 |
| 9 | GO:0080055: low-affinity nitrate transport | 9.94E-05 |
| 10 | GO:0071494: cellular response to UV-C | 9.94E-05 |
| 11 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.04E-04 |
| 12 | GO:0018279: protein N-linked glycosylation via asparagine | 2.62E-04 |
| 13 | GO:0001731: formation of translation preinitiation complex | 3.24E-04 |
| 14 | GO:0042026: protein refolding | 3.89E-04 |
| 15 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.89E-04 |
| 16 | GO:0006458: 'de novo' protein folding | 3.89E-04 |
| 17 | GO:0046686: response to cadmium ion | 4.49E-04 |
| 18 | GO:0009699: phenylpropanoid biosynthetic process | 5.98E-04 |
| 19 | GO:0015706: nitrate transport | 9.89E-04 |
| 20 | GO:0010588: cotyledon vascular tissue pattern formation | 1.07E-03 |
| 21 | GO:0006446: regulation of translational initiation | 1.16E-03 |
| 22 | GO:0006487: protein N-linked glycosylation | 1.43E-03 |
| 23 | GO:0051302: regulation of cell division | 1.53E-03 |
| 24 | GO:0061077: chaperone-mediated protein folding | 1.63E-03 |
| 25 | GO:0007005: mitochondrion organization | 1.73E-03 |
| 26 | GO:0008033: tRNA processing | 2.15E-03 |
| 27 | GO:0010305: leaf vascular tissue pattern formation | 2.26E-03 |
| 28 | GO:0080156: mitochondrial mRNA modification | 2.61E-03 |
| 29 | GO:0031047: gene silencing by RNA | 2.73E-03 |
| 30 | GO:0016126: sterol biosynthetic process | 3.34E-03 |
| 31 | GO:0006974: cellular response to DNA damage stimulus | 3.60E-03 |
| 32 | GO:0042128: nitrate assimilation | 3.60E-03 |
| 33 | GO:0009407: toxin catabolic process | 4.28E-03 |
| 34 | GO:0009631: cold acclimation | 4.42E-03 |
| 35 | GO:0006099: tricarboxylic acid cycle | 4.85E-03 |
| 36 | GO:0009636: response to toxic substance | 6.07E-03 |
| 37 | GO:0009664: plant-type cell wall organization | 6.55E-03 |
| 38 | GO:0006364: rRNA processing | 6.88E-03 |
| 39 | GO:0006857: oligopeptide transport | 7.21E-03 |
| 40 | GO:0048367: shoot system development | 7.90E-03 |
| 41 | GO:0016569: covalent chromatin modification | 8.43E-03 |
| 42 | GO:0009414: response to water deprivation | 1.05E-02 |
| 43 | GO:0009845: seed germination | 1.09E-02 |
| 44 | GO:0009790: embryo development | 1.15E-02 |
| 45 | GO:0006413: translational initiation | 1.23E-02 |
| 46 | GO:0009409: response to cold | 1.47E-02 |
| 47 | GO:0009826: unidimensional cell growth | 1.71E-02 |
| 48 | GO:0042254: ribosome biogenesis | 1.78E-02 |
| 49 | GO:0006970: response to osmotic stress | 1.86E-02 |
| 50 | GO:0048366: leaf development | 1.98E-02 |
| 51 | GO:0032259: methylation | 2.62E-02 |
| 52 | GO:0006281: DNA repair | 2.71E-02 |
| 53 | GO:0048364: root development | 2.79E-02 |
| 54 | GO:0006397: mRNA processing | 2.79E-02 |
| 55 | GO:0050832: defense response to fungus | 3.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 3 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 4 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 5 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.17E-06 |
| 6 | GO:0005524: ATP binding | 2.09E-06 |
| 7 | GO:0004815: aspartate-tRNA ligase activity | 2.19E-05 |
| 8 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 5.64E-05 |
| 9 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 5.64E-05 |
| 10 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 5.64E-05 |
| 11 | GO:0004817: cysteine-tRNA ligase activity | 5.64E-05 |
| 12 | GO:0070181: small ribosomal subunit rRNA binding | 9.94E-05 |
| 13 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 9.94E-05 |
| 14 | GO:0005507: copper ion binding | 1.21E-04 |
| 15 | GO:0003697: single-stranded DNA binding | 2.70E-04 |
| 16 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 3.24E-04 |
| 17 | GO:0003729: mRNA binding | 4.18E-04 |
| 18 | GO:0008143: poly(A) binding | 4.56E-04 |
| 19 | GO:0043295: glutathione binding | 4.56E-04 |
| 20 | GO:0003678: DNA helicase activity | 6.71E-04 |
| 21 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 7.48E-04 |
| 22 | GO:0001054: RNA polymerase I activity | 9.07E-04 |
| 23 | GO:0044183: protein binding involved in protein folding | 9.07E-04 |
| 24 | GO:0010181: FMN binding | 2.38E-03 |
| 25 | GO:0003723: RNA binding | 5.11E-03 |
| 26 | GO:0051539: 4 iron, 4 sulfur cluster binding | 5.15E-03 |
| 27 | GO:0000166: nucleotide binding | 5.34E-03 |
| 28 | GO:0004364: glutathione transferase activity | 5.45E-03 |
| 29 | GO:0043621: protein self-association | 5.91E-03 |
| 30 | GO:0015293: symporter activity | 6.07E-03 |
| 31 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.88E-03 |
| 32 | GO:0003690: double-stranded DNA binding | 7.05E-03 |
| 33 | GO:0051082: unfolded protein binding | 8.79E-03 |
| 34 | GO:0008026: ATP-dependent helicase activity | 9.16E-03 |
| 35 | GO:0004386: helicase activity | 9.34E-03 |
| 36 | GO:0016829: lyase activity | 1.09E-02 |
| 37 | GO:0005215: transporter activity | 1.20E-02 |
| 38 | GO:0003743: translation initiation factor activity | 1.44E-02 |
| 39 | GO:0008168: methyltransferase activity | 1.71E-02 |
| 40 | GO:0016887: ATPase activity | 3.70E-02 |
| 41 | GO:0003676: nucleic acid binding | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008250: oligosaccharyltransferase complex | 1.17E-06 |
| 2 | GO:0005829: cytosol | 1.79E-05 |
| 3 | GO:0005730: nucleolus | 6.22E-05 |
| 4 | GO:0016282: eukaryotic 43S preinitiation complex | 3.24E-04 |
| 5 | GO:0033290: eukaryotic 48S preinitiation complex | 3.89E-04 |
| 6 | GO:0010494: cytoplasmic stress granule | 6.71E-04 |
| 7 | GO:0005736: DNA-directed RNA polymerase I complex | 6.71E-04 |
| 8 | GO:0005783: endoplasmic reticulum | 9.45E-04 |
| 9 | GO:0032040: small-subunit processome | 9.89E-04 |
| 10 | GO:0005774: vacuolar membrane | 1.49E-03 |
| 11 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.83E-03 |
| 12 | GO:0009505: plant-type cell wall | 2.14E-03 |
| 13 | GO:0005834: heterotrimeric G-protein complex | 8.08E-03 |
| 14 | GO:0046658: anchored component of plasma membrane | 1.58E-02 |
| 15 | GO:0005789: endoplasmic reticulum membrane | 1.66E-02 |
| 16 | GO:0005737: cytoplasm | 1.77E-02 |
| 17 | GO:0005794: Golgi apparatus | 1.80E-02 |
| 18 | GO:0016020: membrane | 3.20E-02 |
| 19 | GO:0009506: plasmodesma | 4.17E-02 |
| 20 | GO:0005618: cell wall | 4.29E-02 |
| 21 | GO:0005777: peroxisome | 4.49E-02 |