Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G21780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0015690: aluminum cation transport0.00E+00
4GO:0009617: response to bacterium4.06E-09
5GO:0010120: camalexin biosynthetic process5.64E-08
6GO:0071456: cellular response to hypoxia3.17E-06
7GO:0010200: response to chitin7.74E-06
8GO:0042742: defense response to bacterium3.10E-05
9GO:0070588: calcium ion transmembrane transport4.28E-05
10GO:0000162: tryptophan biosynthetic process5.10E-05
11GO:0009697: salicylic acid biosynthetic process5.85E-05
12GO:0006564: L-serine biosynthetic process5.85E-05
13GO:0050832: defense response to fungus6.91E-05
14GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly8.60E-05
15GO:0009625: response to insect1.06E-04
16GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.19E-04
17GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.00E-04
18GO:0080120: CAAX-box protein maturation2.27E-04
19GO:0071586: CAAX-box protein processing2.27E-04
20GO:0051245: negative regulation of cellular defense response2.27E-04
21GO:0080173: male-female gamete recognition during double fertilization2.27E-04
22GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.27E-04
23GO:0010941: regulation of cell death2.27E-04
24GO:0010726: positive regulation of hydrogen peroxide metabolic process2.27E-04
25GO:0033306: phytol metabolic process2.27E-04
26GO:0009700: indole phytoalexin biosynthetic process2.27E-04
27GO:0010112: regulation of systemic acquired resistance3.00E-04
28GO:0009737: response to abscisic acid3.41E-04
29GO:0043069: negative regulation of programmed cell death4.18E-04
30GO:0009682: induced systemic resistance4.83E-04
31GO:0052544: defense response by callose deposition in cell wall4.83E-04
32GO:0015914: phospholipid transport5.05E-04
33GO:0019521: D-gluconate metabolic process5.05E-04
34GO:0002215: defense response to nematode5.05E-04
35GO:0015865: purine nucleotide transport5.05E-04
36GO:0019441: tryptophan catabolic process to kynurenine5.05E-04
37GO:0009156: ribonucleoside monophosphate biosynthetic process5.05E-04
38GO:0006468: protein phosphorylation5.98E-04
39GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway8.21E-04
40GO:0048281: inflorescence morphogenesis8.21E-04
41GO:0010498: proteasomal protein catabolic process8.21E-04
42GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening8.21E-04
43GO:0034051: negative regulation of plant-type hypersensitive response8.21E-04
44GO:0010359: regulation of anion channel activity8.21E-04
45GO:0051176: positive regulation of sulfur metabolic process8.21E-04
46GO:0080147: root hair cell development9.67E-04
47GO:0007166: cell surface receptor signaling pathway9.69E-04
48GO:0010116: positive regulation of abscisic acid biosynthetic process1.17E-03
49GO:0046902: regulation of mitochondrial membrane permeability1.17E-03
50GO:0006612: protein targeting to membrane1.17E-03
51GO:0010255: glucose mediated signaling pathway1.17E-03
52GO:0030433: ubiquitin-dependent ERAD pathway1.27E-03
53GO:0009165: nucleotide biosynthetic process1.56E-03
54GO:1901141: regulation of lignin biosynthetic process1.56E-03
55GO:0010363: regulation of plant-type hypersensitive response1.56E-03
56GO:0010508: positive regulation of autophagy1.56E-03
57GO:0080142: regulation of salicylic acid biosynthetic process1.56E-03
58GO:0030308: negative regulation of cell growth1.99E-03
59GO:0000304: response to singlet oxygen1.99E-03
60GO:0009646: response to absence of light2.03E-03
61GO:0055114: oxidation-reduction process2.23E-03
62GO:0006561: proline biosynthetic process2.45E-03
63GO:0010942: positive regulation of cell death2.45E-03
64GO:1902456: regulation of stomatal opening2.45E-03
65GO:0009117: nucleotide metabolic process2.45E-03
66GO:0009759: indole glucosinolate biosynthetic process2.45E-03
67GO:0071470: cellular response to osmotic stress2.94E-03
68GO:0009094: L-phenylalanine biosynthetic process2.94E-03
69GO:0050790: regulation of catalytic activity3.47E-03
70GO:1900056: negative regulation of leaf senescence3.47E-03
71GO:0070370: cellular heat acclimation3.47E-03
72GO:1902074: response to salt3.47E-03
73GO:0009816: defense response to bacterium, incompatible interaction3.55E-03
74GO:0045010: actin nucleation4.02E-03
75GO:0009061: anaerobic respiration4.02E-03
76GO:0010928: regulation of auxin mediated signaling pathway4.02E-03
77GO:0009819: drought recovery4.02E-03
78GO:0030091: protein repair4.02E-03
79GO:0006952: defense response4.12E-03
80GO:0010150: leaf senescence4.43E-03
81GO:0043562: cellular response to nitrogen levels4.60E-03
82GO:0009808: lignin metabolic process4.60E-03
83GO:0009699: phenylpropanoid biosynthetic process4.60E-03
84GO:0009932: cell tip growth4.60E-03
85GO:0010204: defense response signaling pathway, resistance gene-independent4.60E-03
86GO:0009407: toxin catabolic process4.82E-03
87GO:0010119: regulation of stomatal movement5.06E-03
88GO:0006098: pentose-phosphate shunt5.22E-03
89GO:0019432: triglyceride biosynthetic process5.22E-03
90GO:0045087: innate immune response5.54E-03
91GO:2000280: regulation of root development5.85E-03
92GO:0006896: Golgi to vacuole transport6.51E-03
93GO:0055062: phosphate ion homeostasis6.51E-03
94GO:0009870: defense response signaling pathway, resistance gene-dependent6.51E-03
95GO:0006032: chitin catabolic process6.51E-03
96GO:0051707: response to other organism7.14E-03
97GO:0000272: polysaccharide catabolic process7.20E-03
98GO:0048229: gametophyte development7.20E-03
99GO:0006890: retrograde vesicle-mediated transport, Golgi to ER7.92E-03
100GO:0009636: response to toxic substance8.03E-03
101GO:0006979: response to oxidative stress8.12E-03
102GO:2000028: regulation of photoperiodism, flowering8.66E-03
103GO:0009718: anthocyanin-containing compound biosynthetic process8.66E-03
104GO:0034605: cellular response to heat9.42E-03
105GO:0006541: glutamine metabolic process9.42E-03
106GO:0002237: response to molecule of bacterial origin9.42E-03
107GO:0007034: vacuolar transport9.42E-03
108GO:0051603: proteolysis involved in cellular protein catabolic process9.98E-03
109GO:0080167: response to karrikin1.01E-02
110GO:2000377: regulation of reactive oxygen species metabolic process1.19E-02
111GO:0005992: trehalose biosynthetic process1.19E-02
112GO:0009116: nucleoside metabolic process1.19E-02
113GO:0009863: salicylic acid mediated signaling pathway1.19E-02
114GO:0009626: plant-type hypersensitive response1.22E-02
115GO:0009620: response to fungus1.26E-02
116GO:0048278: vesicle docking1.36E-02
117GO:0016998: cell wall macromolecule catabolic process1.36E-02
118GO:0031348: negative regulation of defense response1.45E-02
119GO:0009814: defense response, incompatible interaction1.45E-02
120GO:0016226: iron-sulfur cluster assembly1.45E-02
121GO:0010227: floral organ abscission1.54E-02
122GO:0032259: methylation1.58E-02
123GO:0009751: response to salicylic acid1.63E-02
124GO:0010584: pollen exine formation1.64E-02
125GO:0006817: phosphate ion transport1.64E-02
126GO:0009561: megagametogenesis1.64E-02
127GO:0042147: retrograde transport, endosome to Golgi1.73E-02
128GO:0070417: cellular response to cold1.73E-02
129GO:0042631: cellular response to water deprivation1.83E-02
130GO:0008152: metabolic process1.88E-02
131GO:0010197: polar nucleus fusion1.93E-02
132GO:0061025: membrane fusion2.03E-02
133GO:0048544: recognition of pollen2.03E-02
134GO:0009851: auxin biosynthetic process2.14E-02
135GO:0006623: protein targeting to vacuole2.14E-02
136GO:0002229: defense response to oomycetes2.24E-02
137GO:0000302: response to reactive oxygen species2.24E-02
138GO:0006891: intra-Golgi vesicle-mediated transport2.24E-02
139GO:0009630: gravitropism2.35E-02
140GO:0009651: response to salt stress2.43E-02
141GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.67E-02
142GO:0009627: systemic acquired resistance3.15E-02
143GO:0006906: vesicle fusion3.15E-02
144GO:0006950: response to stress3.27E-02
145GO:0009817: defense response to fungus, incompatible interaction3.52E-02
146GO:0009813: flavonoid biosynthetic process3.65E-02
147GO:0016310: phosphorylation3.69E-02
148GO:0015031: protein transport3.74E-02
149GO:0010043: response to zinc ion3.90E-02
150GO:0006970: response to osmotic stress3.96E-02
151GO:0009409: response to cold4.10E-02
152GO:0009867: jasmonic acid mediated signaling pathway4.17E-02
153GO:0009723: response to ethylene4.26E-02
154GO:0006839: mitochondrial transport4.57E-02
155GO:0006887: exocytosis4.71E-02
156GO:0042542: response to hydrogen peroxide4.85E-02
157GO:0046777: protein autophosphorylation4.86E-02
158GO:0006511: ubiquitin-dependent protein catabolic process4.96E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0009940: amino-terminal vacuolar sorting propeptide binding0.00E+00
4GO:0005522: profilin binding0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0005516: calmodulin binding1.04E-05
7GO:0016301: kinase activity2.33E-05
8GO:0005388: calcium-transporting ATPase activity2.90E-05
9GO:0005496: steroid binding5.85E-05
10GO:0036402: proteasome-activating ATPase activity8.60E-05
11GO:0004656: procollagen-proline 4-dioxygenase activity1.19E-04
12GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity2.27E-04
13GO:0004425: indole-3-glycerol-phosphate synthase activity2.27E-04
14GO:0033984: indole-3-glycerol-phosphate lyase activity2.27E-04
15GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.27E-04
16GO:0010209: vacuolar sorting signal binding2.27E-04
17GO:0016920: pyroglutamyl-peptidase activity2.27E-04
18GO:0005524: ATP binding2.80E-04
19GO:0016597: amino acid binding3.47E-04
20GO:0004129: cytochrome-c oxidase activity4.83E-04
21GO:0001047: core promoter binding5.05E-04
22GO:0004617: phosphoglycerate dehydrogenase activity5.05E-04
23GO:0004061: arylformamidase activity5.05E-04
24GO:0004385: guanylate kinase activity5.05E-04
25GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.34E-04
26GO:0017025: TBP-class protein binding7.89E-04
27GO:0004049: anthranilate synthase activity8.21E-04
28GO:0004383: guanylate cyclase activity8.21E-04
29GO:0004364: glutathione transferase activity9.28E-04
30GO:0009055: electron carrier activity9.64E-04
31GO:0004674: protein serine/threonine kinase activity1.12E-03
32GO:0004749: ribose phosphate diphosphokinase activity1.17E-03
33GO:0008276: protein methyltransferase activity1.17E-03
34GO:0004298: threonine-type endopeptidase activity1.17E-03
35GO:0047769: arogenate dehydratase activity1.56E-03
36GO:0004834: tryptophan synthase activity1.56E-03
37GO:0004737: pyruvate decarboxylase activity1.56E-03
38GO:0004664: prephenate dehydratase activity1.56E-03
39GO:0050660: flavin adenine dinucleotide binding1.91E-03
40GO:0005471: ATP:ADP antiporter activity1.99E-03
41GO:0045431: flavonol synthase activity1.99E-03
42GO:0030976: thiamine pyrophosphate binding2.45E-03
43GO:0004526: ribonuclease P activity2.45E-03
44GO:0004029: aldehyde dehydrogenase (NAD) activity2.45E-03
45GO:0008113: peptide-methionine (S)-S-oxide reductase activity2.94E-03
46GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.94E-03
47GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.94E-03
48GO:0004144: diacylglycerol O-acyltransferase activity2.94E-03
49GO:0016831: carboxy-lyase activity3.47E-03
50GO:0102425: myricetin 3-O-glucosyltransferase activity3.47E-03
51GO:0102360: daphnetin 3-O-glucosyltransferase activity3.47E-03
52GO:0004683: calmodulin-dependent protein kinase activity3.95E-03
53GO:0030247: polysaccharide binding3.95E-03
54GO:0047893: flavonol 3-O-glucosyltransferase activity4.02E-03
55GO:0004033: aldo-keto reductase (NADP) activity4.02E-03
56GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.16E-03
57GO:0004222: metalloendopeptidase activity4.82E-03
58GO:0071949: FAD binding5.22E-03
59GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors5.54E-03
60GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.85E-03
61GO:0004568: chitinase activity6.51E-03
62GO:0008171: O-methyltransferase activity6.51E-03
63GO:0008047: enzyme activator activity6.51E-03
64GO:0005509: calcium ion binding6.96E-03
65GO:0008168: methyltransferase activity7.35E-03
66GO:0005262: calcium channel activity8.66E-03
67GO:0000175: 3'-5'-exoribonuclease activity8.66E-03
68GO:0004175: endopeptidase activity9.42E-03
69GO:0004535: poly(A)-specific ribonuclease activity9.42E-03
70GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.42E-03
71GO:0008233: peptidase activity9.92E-03
72GO:0004497: monooxygenase activity1.01E-02
73GO:0008061: chitin binding1.02E-02
74GO:0031418: L-ascorbic acid binding1.19E-02
75GO:0003954: NADH dehydrogenase activity1.19E-02
76GO:0008134: transcription factor binding1.19E-02
77GO:0008408: 3'-5' exonuclease activity1.36E-02
78GO:0035251: UDP-glucosyltransferase activity1.36E-02
79GO:0004540: ribonuclease activity1.36E-02
80GO:0030246: carbohydrate binding1.44E-02
81GO:0004499: N,N-dimethylaniline monooxygenase activity1.64E-02
82GO:0020037: heme binding1.76E-02
83GO:0043565: sequence-specific DNA binding2.20E-02
84GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.22E-02
85GO:0004197: cysteine-type endopeptidase activity2.35E-02
86GO:0051015: actin filament binding2.46E-02
87GO:0044212: transcription regulatory region DNA binding2.64E-02
88GO:0008194: UDP-glycosyltransferase activity2.67E-02
89GO:0009931: calcium-dependent protein serine/threonine kinase activity3.15E-02
90GO:0000287: magnesium ion binding3.62E-02
91GO:0015238: drug transmembrane transporter activity3.65E-02
92GO:0030145: manganese ion binding3.90E-02
93GO:0000149: SNARE binding4.43E-02
94GO:0050661: NADP binding4.57E-02
95GO:0061630: ubiquitin protein ligase activity4.79E-02
96GO:0005484: SNAP receptor activity4.98E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005783: endoplasmic reticulum4.05E-05
3GO:0005886: plasma membrane7.66E-05
4GO:0031597: cytosolic proteasome complex1.19E-04
5GO:0031595: nuclear proteasome complex1.57E-04
6GO:0000502: proteasome complex1.90E-04
7GO:0005911: cell-cell junction2.27E-04
8GO:0030014: CCR4-NOT complex2.27E-04
9GO:0008540: proteasome regulatory particle, base subcomplex3.56E-04
10GO:0005829: cytosol4.22E-04
11GO:0031304: intrinsic component of mitochondrial inner membrane5.05E-04
12GO:0005901: caveola5.05E-04
13GO:0005751: mitochondrial respiratory chain complex IV8.21E-04
14GO:0005839: proteasome core complex1.17E-03
15GO:0030658: transport vesicle membrane1.17E-03
16GO:0016021: integral component of membrane1.36E-03
17GO:0005746: mitochondrial respiratory chain1.99E-03
18GO:0000164: protein phosphatase type 1 complex1.99E-03
19GO:0043231: intracellular membrane-bounded organelle4.45E-03
20GO:0019773: proteasome core complex, alpha-subunit complex4.60E-03
21GO:0030665: clathrin-coated vesicle membrane5.85E-03
22GO:0005887: integral component of plasma membrane6.10E-03
23GO:0017119: Golgi transport complex6.51E-03
24GO:0031902: late endosome membrane6.58E-03
25GO:0016020: membrane8.60E-03
26GO:0031012: extracellular matrix8.66E-03
27GO:0005764: lysosome9.42E-03
28GO:0005773: vacuole9.54E-03
29GO:0030176: integral component of endoplasmic reticulum membrane1.02E-02
30GO:0031225: anchored component of membrane1.79E-02
31GO:0005770: late endosome1.93E-02
32GO:0032580: Golgi cisterna membrane2.57E-02
33GO:0005615: extracellular space2.67E-02
34GO:0005778: peroxisomal membrane2.68E-02
35GO:0046658: anchored component of plasma membrane3.16E-02
36GO:0005794: Golgi apparatus3.48E-02
37GO:0009536: plastid3.55E-02
38GO:0005777: peroxisome4.05E-02
39GO:0000139: Golgi membrane4.10E-02
40GO:0031201: SNARE complex4.71E-02
41GO:0005789: endoplasmic reticulum membrane4.87E-02
Gene type



Gene DE type