Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G21190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
2GO:0015822: ornithine transport0.00E+00
3GO:0080094: response to trehalose-6-phosphate0.00E+00
4GO:0010430: fatty acid omega-oxidation0.00E+00
5GO:0005996: monosaccharide metabolic process0.00E+00
6GO:0007638: mechanosensory behavior0.00E+00
7GO:0090393: sepal giant cell development0.00E+00
8GO:0009765: photosynthesis, light harvesting4.26E-05
9GO:0006546: glycine catabolic process4.26E-05
10GO:0006833: water transport6.20E-05
11GO:0044209: AMP salvage6.78E-05
12GO:0045490: pectin catabolic process1.56E-04
13GO:0034220: ion transmembrane transport1.82E-04
14GO:0007155: cell adhesion2.28E-04
15GO:1901599: (-)-pinoresinol biosynthetic process2.48E-04
16GO:0006659: phosphatidylserine biosynthetic process2.48E-04
17GO:0000066: mitochondrial ornithine transport2.48E-04
18GO:0019510: S-adenosylhomocysteine catabolic process2.48E-04
19GO:0006169: adenosine salvage2.48E-04
20GO:1901349: glucosinolate transport2.48E-04
21GO:0090449: phloem glucosinolate loading2.48E-04
22GO:0010442: guard cell morphogenesis2.48E-04
23GO:0071370: cellular response to gibberellin stimulus2.48E-04
24GO:0010583: response to cyclopentenone2.96E-04
25GO:0007267: cell-cell signaling3.80E-04
26GO:0080167: response to karrikin5.39E-04
27GO:0030388: fructose 1,6-bisphosphate metabolic process5.49E-04
28GO:2000123: positive regulation of stomatal complex development5.49E-04
29GO:0052541: plant-type cell wall cellulose metabolic process5.49E-04
30GO:0033353: S-adenosylmethionine cycle5.49E-04
31GO:0015786: UDP-glucose transport5.49E-04
32GO:0006810: transport6.19E-04
33GO:0019253: reductive pentose-phosphate cycle7.98E-04
34GO:0071555: cell wall organization8.70E-04
35GO:0015840: urea transport8.92E-04
36GO:0006696: ergosterol biosynthetic process8.92E-04
37GO:0006065: UDP-glucuronate biosynthetic process8.92E-04
38GO:0015783: GDP-fucose transport8.92E-04
39GO:0090506: axillary shoot meristem initiation8.92E-04
40GO:0006000: fructose metabolic process8.92E-04
41GO:0009833: plant-type primary cell wall biogenesis9.89E-04
42GO:0032877: positive regulation of DNA endoreduplication1.27E-03
43GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.27E-03
44GO:0006166: purine ribonucleoside salvage1.27E-03
45GO:0007231: osmosensory signaling pathway1.27E-03
46GO:0072334: UDP-galactose transmembrane transport1.27E-03
47GO:0080170: hydrogen peroxide transmembrane transport1.27E-03
48GO:0051016: barbed-end actin filament capping1.27E-03
49GO:0006168: adenine salvage1.27E-03
50GO:0009694: jasmonic acid metabolic process1.70E-03
51GO:0006542: glutamine biosynthetic process1.70E-03
52GO:0019676: ammonia assimilation cycle1.70E-03
53GO:0019464: glycine decarboxylation via glycine cleavage system1.70E-03
54GO:0006085: acetyl-CoA biosynthetic process1.70E-03
55GO:0045727: positive regulation of translation1.70E-03
56GO:0033500: carbohydrate homeostasis1.70E-03
57GO:0031122: cytoplasmic microtubule organization1.70E-03
58GO:2000038: regulation of stomatal complex development1.70E-03
59GO:0006021: inositol biosynthetic process1.70E-03
60GO:0016117: carotenoid biosynthetic process1.84E-03
61GO:0016123: xanthophyll biosynthetic process2.17E-03
62GO:0010375: stomatal complex patterning2.17E-03
63GO:0016120: carotene biosynthetic process2.17E-03
64GO:0071554: cell wall organization or biogenesis2.64E-03
65GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.67E-03
66GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.71E-03
67GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.21E-03
68GO:0045926: negative regulation of growth3.21E-03
69GO:0010067: procambium histogenesis3.21E-03
70GO:0017148: negative regulation of translation3.21E-03
71GO:0009094: L-phenylalanine biosynthetic process3.21E-03
72GO:0050790: regulation of catalytic activity3.79E-03
73GO:0006875: cellular metal ion homeostasis4.39E-03
74GO:0045010: actin nucleation4.39E-03
75GO:0008610: lipid biosynthetic process4.39E-03
76GO:0010411: xyloglucan metabolic process4.49E-03
77GO:0018298: protein-chromophore linkage4.97E-03
78GO:0032544: plastid translation5.03E-03
79GO:0006002: fructose 6-phosphate metabolic process5.03E-03
80GO:0022900: electron transport chain5.03E-03
81GO:0006754: ATP biosynthetic process5.70E-03
82GO:0048589: developmental growth5.70E-03
83GO:0016051: carbohydrate biosynthetic process6.30E-03
84GO:0005975: carbohydrate metabolic process6.80E-03
85GO:0010192: mucilage biosynthetic process7.12E-03
86GO:0051555: flavonol biosynthetic process7.12E-03
87GO:0019538: protein metabolic process7.12E-03
88GO:0046686: response to cadmium ion7.16E-03
89GO:0006839: mitochondrial transport7.18E-03
90GO:0055114: oxidation-reduction process7.41E-03
91GO:0006631: fatty acid metabolic process7.49E-03
92GO:0000272: polysaccharide catabolic process7.88E-03
93GO:0018119: peptidyl-cysteine S-nitrosylation7.88E-03
94GO:0006816: calcium ion transport7.88E-03
95GO:0009773: photosynthetic electron transport in photosystem I7.88E-03
96GO:0009807: lignan biosynthetic process7.88E-03
97GO:0042546: cell wall biogenesis8.46E-03
98GO:0045037: protein import into chloroplast stroma8.66E-03
99GO:0030036: actin cytoskeleton organization9.47E-03
100GO:0050826: response to freezing9.47E-03
101GO:0009725: response to hormone9.47E-03
102GO:0006094: gluconeogenesis9.47E-03
103GO:0009767: photosynthetic electron transport chain9.47E-03
104GO:0005986: sucrose biosynthetic process9.47E-03
105GO:0009735: response to cytokinin9.73E-03
106GO:0010223: secondary shoot formation1.03E-02
107GO:0010207: photosystem II assembly1.03E-02
108GO:0007049: cell cycle1.05E-02
109GO:0070588: calcium ion transmembrane transport1.12E-02
110GO:0009969: xyloglucan biosynthetic process1.12E-02
111GO:0005985: sucrose metabolic process1.12E-02
112GO:0006071: glycerol metabolic process1.21E-02
113GO:0007010: cytoskeleton organization1.30E-02
114GO:0010026: trichome differentiation1.39E-02
115GO:0009695: jasmonic acid biosynthetic process1.39E-02
116GO:0007017: microtubule-based process1.39E-02
117GO:0009768: photosynthesis, light harvesting in photosystem I1.39E-02
118GO:0016998: cell wall macromolecule catabolic process1.49E-02
119GO:0031408: oxylipin biosynthetic process1.49E-02
120GO:0048278: vesicle docking1.49E-02
121GO:0045454: cell redox homeostasis1.50E-02
122GO:0042545: cell wall modification1.52E-02
123GO:0006730: one-carbon metabolic process1.59E-02
124GO:0080092: regulation of pollen tube growth1.59E-02
125GO:0030245: cellulose catabolic process1.59E-02
126GO:0055085: transmembrane transport1.60E-02
127GO:0009742: brassinosteroid mediated signaling pathway1.66E-02
128GO:0001944: vasculature development1.69E-02
129GO:0006869: lipid transport1.69E-02
130GO:0009294: DNA mediated transformation1.69E-02
131GO:0010089: xylem development1.79E-02
132GO:0006284: base-excision repair1.79E-02
133GO:0019722: calcium-mediated signaling1.79E-02
134GO:0016042: lipid catabolic process1.89E-02
135GO:0010087: phloem or xylem histogenesis2.01E-02
136GO:0015991: ATP hydrolysis coupled proton transport2.01E-02
137GO:0042631: cellular response to water deprivation2.01E-02
138GO:0000271: polysaccharide biosynthetic process2.01E-02
139GO:0080022: primary root development2.01E-02
140GO:0009741: response to brassinosteroid2.12E-02
141GO:0045489: pectin biosynthetic process2.12E-02
142GO:0015986: ATP synthesis coupled proton transport2.23E-02
143GO:0061025: membrane fusion2.23E-02
144GO:0019252: starch biosynthetic process2.34E-02
145GO:0008654: phospholipid biosynthetic process2.34E-02
146GO:0009791: post-embryonic development2.34E-02
147GO:0007264: small GTPase mediated signal transduction2.58E-02
148GO:0016032: viral process2.58E-02
149GO:0019761: glucosinolate biosynthetic process2.58E-02
150GO:0010090: trichome morphogenesis2.70E-02
151GO:1901657: glycosyl compound metabolic process2.70E-02
152GO:0007166: cell surface receptor signaling pathway3.10E-02
153GO:0016126: sterol biosynthetic process3.19E-02
154GO:0042742: defense response to bacterium3.19E-02
155GO:0009617: response to bacterium3.24E-02
156GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.32E-02
157GO:0006906: vesicle fusion3.46E-02
158GO:0009817: defense response to fungus, incompatible interaction3.86E-02
159GO:0030244: cellulose biosynthetic process3.86E-02
160GO:0048767: root hair elongation4.00E-02
161GO:0000160: phosphorelay signal transduction system4.00E-02
162GO:0009813: flavonoid biosynthetic process4.00E-02
163GO:0009832: plant-type cell wall biogenesis4.00E-02
164GO:0010218: response to far red light4.14E-02
165GO:0007568: aging4.28E-02
166GO:0051301: cell division4.44E-02
167GO:0009637: response to blue light4.56E-02
168GO:0009867: jasmonic acid mediated signaling pathway4.56E-02
RankGO TermAdjusted P value
1GO:0046905: phytoene synthase activity0.00E+00
2GO:0030795: jasmonate O-methyltransferase activity0.00E+00
3GO:0102078: methyl jasmonate methylesterase activity0.00E+00
4GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
5GO:0050613: delta14-sterol reductase activity0.00E+00
6GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
7GO:0045435: lycopene epsilon cyclase activity0.00E+00
8GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
9GO:0030570: pectate lyase activity1.28E-04
10GO:0051920: peroxiredoxin activity1.37E-04
11GO:0016209: antioxidant activity2.28E-04
12GO:0015088: copper uptake transmembrane transporter activity2.48E-04
13GO:0004001: adenosine kinase activity2.48E-04
14GO:0090448: glucosinolate:proton symporter activity2.48E-04
15GO:0044715: 8-oxo-dGDP phosphatase activity2.48E-04
16GO:0042349: guiding stereospecific synthesis activity2.48E-04
17GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.48E-04
18GO:0004560: alpha-L-fucosidase activity2.48E-04
19GO:0004013: adenosylhomocysteinase activity2.48E-04
20GO:0008568: microtubule-severing ATPase activity2.48E-04
21GO:0051996: squalene synthase activity2.48E-04
22GO:0010313: phytochrome binding2.48E-04
23GO:0015250: water channel activity4.41E-04
24GO:0008967: phosphoglycolate phosphatase activity5.49E-04
25GO:0004618: phosphoglycerate kinase activity5.49E-04
26GO:0010297: heteropolysaccharide binding5.49E-04
27GO:0004047: aminomethyltransferase activity5.49E-04
28GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity5.49E-04
29GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity5.49E-04
30GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity5.49E-04
31GO:0046593: mandelonitrile lyase activity5.49E-04
32GO:0000064: L-ornithine transmembrane transporter activity5.49E-04
33GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity5.49E-04
34GO:0004512: inositol-3-phosphate synthase activity5.49E-04
35GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity5.49E-04
36GO:0004310: farnesyl-diphosphate farnesyltransferase activity5.49E-04
37GO:0005457: GDP-fucose transmembrane transporter activity8.92E-04
38GO:0003979: UDP-glucose 6-dehydrogenase activity8.92E-04
39GO:0070330: aromatase activity8.92E-04
40GO:0005504: fatty acid binding8.92E-04
41GO:0003913: DNA photolyase activity8.92E-04
42GO:0004148: dihydrolipoyl dehydrogenase activity8.92E-04
43GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity8.92E-04
44GO:0003878: ATP citrate synthase activity1.27E-03
45GO:0004375: glycine dehydrogenase (decarboxylating) activity1.27E-03
46GO:0048027: mRNA 5'-UTR binding1.27E-03
47GO:0003999: adenine phosphoribosyltransferase activity1.27E-03
48GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity1.27E-03
49GO:0005460: UDP-glucose transmembrane transporter activity1.27E-03
50GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.27E-03
51GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.28E-03
52GO:0015204: urea transmembrane transporter activity1.70E-03
53GO:0047769: arogenate dehydratase activity1.70E-03
54GO:0004664: prephenate dehydratase activity1.70E-03
55GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.70E-03
56GO:0045430: chalcone isomerase activity1.70E-03
57GO:0004356: glutamate-ammonia ligase activity2.17E-03
58GO:0008725: DNA-3-methyladenine glycosylase activity2.17E-03
59GO:0005459: UDP-galactose transmembrane transporter activity2.17E-03
60GO:0018685: alkane 1-monooxygenase activity2.17E-03
61GO:0030599: pectinesterase activity2.41E-03
62GO:0019901: protein kinase binding2.47E-03
63GO:0016762: xyloglucan:xyloglucosyl transferase activity2.64E-03
64GO:0000210: NAD+ diphosphatase activity2.67E-03
65GO:0042578: phosphoric ester hydrolase activity2.67E-03
66GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.21E-03
67GO:0051753: mannan synthase activity3.21E-03
68GO:0016832: aldehyde-lyase activity3.21E-03
69GO:0005200: structural constituent of cytoskeleton3.40E-03
70GO:0016722: oxidoreductase activity, oxidizing metal ions3.40E-03
71GO:0016413: O-acetyltransferase activity3.60E-03
72GO:0009881: photoreceptor activity3.79E-03
73GO:0004564: beta-fructofuranosidase activity4.39E-03
74GO:0016798: hydrolase activity, acting on glycosyl bonds4.49E-03
75GO:0005507: copper ion binding5.43E-03
76GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism5.70E-03
77GO:0008889: glycerophosphodiester phosphodiesterase activity5.70E-03
78GO:0004672: protein kinase activity6.38E-03
79GO:0004575: sucrose alpha-glucosidase activity6.40E-03
80GO:0005381: iron ion transmembrane transporter activity6.40E-03
81GO:0005089: Rho guanyl-nucleotide exchange factor activity7.88E-03
82GO:0004860: protein kinase inhibitor activity7.88E-03
83GO:0046961: proton-transporting ATPase activity, rotational mechanism7.88E-03
84GO:0008378: galactosyltransferase activity8.66E-03
85GO:0016788: hydrolase activity, acting on ester bonds9.31E-03
86GO:0005262: calcium channel activity9.47E-03
87GO:0004565: beta-galactosidase activity9.47E-03
88GO:0051287: NAD binding9.85E-03
89GO:0050660: flavin adenine dinucleotide binding1.09E-02
90GO:0031409: pigment binding1.21E-02
91GO:0045330: aspartyl esterase activity1.22E-02
92GO:0004857: enzyme inhibitor activity1.30E-02
93GO:0052689: carboxylic ester hydrolase activity1.36E-02
94GO:0051087: chaperone binding1.39E-02
95GO:0033612: receptor serine/threonine kinase binding1.49E-02
96GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.59E-02
97GO:0016760: cellulose synthase (UDP-forming) activity1.69E-02
98GO:0008810: cellulase activity1.69E-02
99GO:0004499: N,N-dimethylaniline monooxygenase activity1.79E-02
100GO:0005102: receptor binding1.90E-02
101GO:0016758: transferase activity, transferring hexosyl groups1.91E-02
102GO:0005516: calmodulin binding2.06E-02
103GO:0016829: lyase activity2.13E-02
104GO:0050662: coenzyme binding2.23E-02
105GO:0004872: receptor activity2.34E-02
106GO:0048038: quinone binding2.46E-02
107GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.53E-02
108GO:0004518: nuclease activity2.58E-02
109GO:0015297: antiporter activity2.59E-02
110GO:0051015: actin filament binding2.70E-02
111GO:0000156: phosphorelay response regulator activity2.70E-02
112GO:0016759: cellulose synthase activity2.82E-02
113GO:0008483: transaminase activity2.94E-02
114GO:0008289: lipid binding2.96E-02
115GO:0008194: UDP-glycosyltransferase activity3.03E-02
116GO:0016597: amino acid binding3.07E-02
117GO:0016168: chlorophyll binding3.32E-02
118GO:0102483: scopolin beta-glucosidase activity3.59E-02
119GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.14E-02
120GO:0004601: peroxidase activity4.19E-02
121GO:0050897: cobalt ion binding4.28E-02
122GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.28E-02
123GO:0003746: translation elongation factor activity4.56E-02
124GO:0016491: oxidoreductase activity4.74E-02
125GO:0000149: SNARE binding4.86E-02
126GO:0008422: beta-glucosidase activity4.86E-02
RankGO TermAdjusted P value
1GO:0009571: proplastid stroma0.00E+00
2GO:0048046: apoplast1.86E-11
3GO:0005576: extracellular region4.26E-08
4GO:0031225: anchored component of membrane2.90E-07
5GO:0009505: plant-type cell wall3.04E-06
6GO:0005886: plasma membrane1.17E-05
7GO:0005618: cell wall2.17E-05
8GO:0046658: anchored component of plasma membrane3.55E-05
9GO:0009534: chloroplast thylakoid5.14E-05
10GO:0009941: chloroplast envelope1.71E-04
11GO:0009570: chloroplast stroma1.88E-04
12GO:0016020: membrane2.36E-04
13GO:0009344: nitrite reductase complex [NAD(P)H]2.48E-04
14GO:0009579: thylakoid2.61E-04
15GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.41E-04
16GO:0010287: plastoglobule5.44E-04
17GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain5.49E-04
18GO:0000427: plastid-encoded plastid RNA polymerase complex5.49E-04
19GO:0009535: chloroplast thylakoid membrane5.57E-04
20GO:0009543: chloroplast thylakoid lumen5.91E-04
21GO:0005853: eukaryotic translation elongation factor 1 complex8.92E-04
22GO:0009507: chloroplast9.63E-04
23GO:0005775: vacuolar lumen1.27E-03
24GO:0005960: glycine cleavage complex1.27E-03
25GO:0009346: citrate lyase complex1.27E-03
26GO:0031897: Tic complex1.70E-03
27GO:0009506: plasmodesma2.07E-03
28GO:0010168: ER body2.67E-03
29GO:0010319: stromule3.40E-03
30GO:0009533: chloroplast stromal thylakoid3.79E-03
31GO:0042807: central vacuole3.79E-03
32GO:0000326: protein storage vacuole5.03E-03
33GO:0005773: vacuole5.13E-03
34GO:0005794: Golgi apparatus5.49E-03
35GO:0045298: tubulin complex5.70E-03
36GO:0000325: plant-type vacuole5.75E-03
37GO:0016324: apical plasma membrane7.12E-03
38GO:0005887: integral component of plasma membrane7.42E-03
39GO:0031977: thylakoid lumen7.49E-03
40GO:0030095: chloroplast photosystem II1.03E-02
41GO:0030076: light-harvesting complex1.12E-02
42GO:0030176: integral component of endoplasmic reticulum membrane1.12E-02
43GO:0005753: mitochondrial proton-transporting ATP synthase complex1.12E-02
44GO:0005875: microtubule associated complex1.21E-02
45GO:0009654: photosystem II oxygen evolving complex1.39E-02
46GO:0000139: Golgi membrane1.69E-02
47GO:0016021: integral component of membrane2.09E-02
48GO:0009522: photosystem I2.23E-02
49GO:0009523: photosystem II2.34E-02
50GO:0019898: extrinsic component of membrane2.34E-02
51GO:0009504: cell plate2.34E-02
52GO:0005615: extracellular space3.03E-02
Gene type



Gene DE type