GO Enrichment Analysis of Co-expressed Genes with
AT3G20790
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 2 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0019253: reductive pentose-phosphate cycle | 4.36E-08 |
| 4 | GO:0019464: glycine decarboxylation via glycine cleavage system | 7.70E-06 |
| 5 | GO:0006546: glycine catabolic process | 7.70E-06 |
| 6 | GO:0016031: tRNA import into mitochondrion | 9.14E-05 |
| 7 | GO:0009767: photosynthetic electron transport chain | 1.77E-04 |
| 8 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.16E-04 |
| 9 | GO:0043039: tRNA aminoacylation | 2.16E-04 |
| 10 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.16E-04 |
| 11 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.16E-04 |
| 12 | GO:0080183: response to photooxidative stress | 2.16E-04 |
| 13 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.16E-04 |
| 14 | GO:0061077: chaperone-mediated protein folding | 3.47E-04 |
| 15 | GO:2000082: regulation of L-ascorbic acid biosynthetic process | 3.61E-04 |
| 16 | GO:0006000: fructose metabolic process | 3.61E-04 |
| 17 | GO:0006518: peptide metabolic process | 3.61E-04 |
| 18 | GO:0071492: cellular response to UV-A | 3.61E-04 |
| 19 | GO:0006696: ergosterol biosynthetic process | 3.61E-04 |
| 20 | GO:0006810: transport | 3.91E-04 |
| 21 | GO:0016117: carotenoid biosynthetic process | 4.87E-04 |
| 22 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.20E-04 |
| 23 | GO:2001141: regulation of RNA biosynthetic process | 5.20E-04 |
| 24 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.20E-04 |
| 25 | GO:0071486: cellular response to high light intensity | 6.90E-04 |
| 26 | GO:0010236: plastoquinone biosynthetic process | 8.73E-04 |
| 27 | GO:0016554: cytidine to uridine editing | 1.07E-03 |
| 28 | GO:0033365: protein localization to organelle | 1.07E-03 |
| 29 | GO:0009735: response to cytokinin | 1.17E-03 |
| 30 | GO:0042026: protein refolding | 1.27E-03 |
| 31 | GO:1901259: chloroplast rRNA processing | 1.27E-03 |
| 32 | GO:0006458: 'de novo' protein folding | 1.27E-03 |
| 33 | GO:0009854: oxidative photosynthetic carbon pathway | 1.27E-03 |
| 34 | GO:0010555: response to mannitol | 1.27E-03 |
| 35 | GO:0009658: chloroplast organization | 1.55E-03 |
| 36 | GO:0009853: photorespiration | 1.60E-03 |
| 37 | GO:0048564: photosystem I assembly | 1.72E-03 |
| 38 | GO:0009642: response to light intensity | 1.72E-03 |
| 39 | GO:0006002: fructose 6-phosphate metabolic process | 1.96E-03 |
| 40 | GO:0071482: cellular response to light stimulus | 1.96E-03 |
| 41 | GO:0048193: Golgi vesicle transport | 1.96E-03 |
| 42 | GO:0010206: photosystem II repair | 2.21E-03 |
| 43 | GO:0006754: ATP biosynthetic process | 2.21E-03 |
| 44 | GO:1900865: chloroplast RNA modification | 2.48E-03 |
| 45 | GO:0009773: photosynthetic electron transport in photosystem I | 3.03E-03 |
| 46 | GO:0019684: photosynthesis, light reaction | 3.03E-03 |
| 47 | GO:0006352: DNA-templated transcription, initiation | 3.03E-03 |
| 48 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.03E-03 |
| 49 | GO:0006096: glycolytic process | 3.24E-03 |
| 50 | GO:0005986: sucrose biosynthetic process | 3.63E-03 |
| 51 | GO:0006094: gluconeogenesis | 3.63E-03 |
| 52 | GO:0010020: chloroplast fission | 3.93E-03 |
| 53 | GO:0019344: cysteine biosynthetic process | 4.92E-03 |
| 54 | GO:0006418: tRNA aminoacylation for protein translation | 5.27E-03 |
| 55 | GO:0007017: microtubule-based process | 5.27E-03 |
| 56 | GO:0007005: mitochondrion organization | 5.98E-03 |
| 57 | GO:0080092: regulation of pollen tube growth | 5.98E-03 |
| 58 | GO:0006284: base-excision repair | 6.73E-03 |
| 59 | GO:0000413: protein peptidyl-prolyl isomerization | 7.51E-03 |
| 60 | GO:0046686: response to cadmium ion | 7.61E-03 |
| 61 | GO:0009741: response to brassinosteroid | 7.91E-03 |
| 62 | GO:0009646: response to absence of light | 8.32E-03 |
| 63 | GO:0019252: starch biosynthetic process | 8.74E-03 |
| 64 | GO:0032502: developmental process | 9.60E-03 |
| 65 | GO:0010286: heat acclimation | 1.09E-02 |
| 66 | GO:0009817: defense response to fungus, incompatible interaction | 1.43E-02 |
| 67 | GO:0042742: defense response to bacterium | 1.69E-02 |
| 68 | GO:0016051: carbohydrate biosynthetic process | 1.69E-02 |
| 69 | GO:0034599: cellular response to oxidative stress | 1.75E-02 |
| 70 | GO:0006631: fatty acid metabolic process | 1.91E-02 |
| 71 | GO:0009744: response to sucrose | 2.03E-02 |
| 72 | GO:0008152: metabolic process | 2.10E-02 |
| 73 | GO:0009644: response to high light intensity | 2.14E-02 |
| 74 | GO:0042538: hyperosmotic salinity response | 2.38E-02 |
| 75 | GO:0009742: brassinosteroid mediated signaling pathway | 3.36E-02 |
| 76 | GO:0009416: response to light stimulus | 3.38E-02 |
| 77 | GO:0006457: protein folding | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 6 | GO:0004618: phosphoglycerate kinase activity | 4.47E-07 |
| 7 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.05E-06 |
| 8 | GO:0005528: FK506 binding | 7.86E-06 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.34E-05 |
| 10 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.78E-05 |
| 11 | GO:0004033: aldo-keto reductase (NADP) activity | 4.94E-05 |
| 12 | GO:0004831: tyrosine-tRNA ligase activity | 9.14E-05 |
| 13 | GO:0051996: squalene synthase activity | 9.14E-05 |
| 14 | GO:0004047: aminomethyltransferase activity | 2.16E-04 |
| 15 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.16E-04 |
| 16 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.16E-04 |
| 17 | GO:0070330: aromatase activity | 3.61E-04 |
| 18 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.61E-04 |
| 19 | GO:0004751: ribose-5-phosphate isomerase activity | 3.61E-04 |
| 20 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.90E-04 |
| 21 | GO:0016987: sigma factor activity | 6.90E-04 |
| 22 | GO:0001053: plastid sigma factor activity | 6.90E-04 |
| 23 | GO:0018685: alkane 1-monooxygenase activity | 8.73E-04 |
| 24 | GO:0008725: DNA-3-methyladenine glycosylase activity | 8.73E-04 |
| 25 | GO:0080030: methyl indole-3-acetate esterase activity | 1.07E-03 |
| 26 | GO:0042578: phosphoric ester hydrolase activity | 1.07E-03 |
| 27 | GO:0051920: peroxiredoxin activity | 1.27E-03 |
| 28 | GO:0016209: antioxidant activity | 1.72E-03 |
| 29 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.21E-03 |
| 30 | GO:0005198: structural molecule activity | 2.30E-03 |
| 31 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.03E-03 |
| 32 | GO:0044183: protein binding involved in protein folding | 3.03E-03 |
| 33 | GO:0004565: beta-galactosidase activity | 3.63E-03 |
| 34 | GO:0015266: protein channel activity | 3.63E-03 |
| 35 | GO:0031072: heat shock protein binding | 3.63E-03 |
| 36 | GO:0051082: unfolded protein binding | 3.89E-03 |
| 37 | GO:0019843: rRNA binding | 4.86E-03 |
| 38 | GO:0022891: substrate-specific transmembrane transporter activity | 6.35E-03 |
| 39 | GO:0003756: protein disulfide isomerase activity | 6.73E-03 |
| 40 | GO:0004812: aminoacyl-tRNA ligase activity | 7.11E-03 |
| 41 | GO:0048038: quinone binding | 9.16E-03 |
| 42 | GO:0016788: hydrolase activity, acting on ester bonds | 1.06E-02 |
| 43 | GO:0008483: transaminase activity | 1.09E-02 |
| 44 | GO:0005200: structural constituent of cytoskeleton | 1.09E-02 |
| 45 | GO:0016597: amino acid binding | 1.14E-02 |
| 46 | GO:0016168: chlorophyll binding | 1.23E-02 |
| 47 | GO:0005525: GTP binding | 1.30E-02 |
| 48 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.38E-02 |
| 49 | GO:0008236: serine-type peptidase activity | 1.38E-02 |
| 50 | GO:0052689: carboxylic ester hydrolase activity | 1.42E-02 |
| 51 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.43E-02 |
| 52 | GO:0005509: calcium ion binding | 1.52E-02 |
| 53 | GO:0004222: metalloendopeptidase activity | 1.54E-02 |
| 54 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.75E-02 |
| 55 | GO:0005515: protein binding | 1.76E-02 |
| 56 | GO:0003924: GTPase activity | 1.91E-02 |
| 57 | GO:0009055: electron carrier activity | 2.05E-02 |
| 58 | GO:0043621: protein self-association | 2.14E-02 |
| 59 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.14E-02 |
| 60 | GO:0016491: oxidoreductase activity | 2.39E-02 |
| 61 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.51E-02 |
| 62 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.89E-02 |
| 63 | GO:0022857: transmembrane transporter activity | 3.09E-02 |
| 64 | GO:0016746: transferase activity, transferring acyl groups | 3.29E-02 |
| 65 | GO:0016758: transferase activity, transferring hexosyl groups | 3.71E-02 |
| 66 | GO:0004252: serine-type endopeptidase activity | 4.07E-02 |
| 67 | GO:0016740: transferase activity | 4.12E-02 |
| 68 | GO:0016787: hydrolase activity | 4.36E-02 |
| 69 | GO:0019825: oxygen binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.82E-20 |
| 3 | GO:0009570: chloroplast stroma | 3.90E-16 |
| 4 | GO:0009941: chloroplast envelope | 4.68E-15 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.06E-12 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 5.97E-11 |
| 7 | GO:0009579: thylakoid | 9.50E-10 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.87E-07 |
| 9 | GO:0005960: glycine cleavage complex | 4.05E-06 |
| 10 | GO:0009534: chloroplast thylakoid | 4.65E-06 |
| 11 | GO:0031977: thylakoid lumen | 1.72E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 2.02E-04 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 3.15E-04 |
| 14 | GO:0019898: extrinsic component of membrane | 6.49E-04 |
| 15 | GO:0010319: stromule | 8.83E-04 |
| 16 | GO:0010168: ER body | 1.07E-03 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 1.49E-03 |
| 18 | GO:0045298: tubulin complex | 2.21E-03 |
| 19 | GO:0016324: apical plasma membrane | 2.75E-03 |
| 20 | GO:0009508: plastid chromosome | 3.63E-03 |
| 21 | GO:0010287: plastoglobule | 4.61E-03 |
| 22 | GO:0042651: thylakoid membrane | 5.27E-03 |
| 23 | GO:0009532: plastid stroma | 5.62E-03 |
| 24 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 6.73E-03 |
| 25 | GO:0048046: apoplast | 8.21E-03 |
| 26 | GO:0009523: photosystem II | 8.74E-03 |
| 27 | GO:0009295: nucleoid | 1.09E-02 |
| 28 | GO:0005874: microtubule | 1.24E-02 |
| 29 | GO:0005773: vacuole | 1.58E-02 |
| 30 | GO:0000325: plant-type vacuole | 1.59E-02 |
| 31 | GO:0022626: cytosolic ribosome | 3.24E-02 |