GO Enrichment Analysis of Co-expressed Genes with
AT3G19790
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010425: DNA methylation on cytosine within a CNG sequence | 0.00E+00 |
| 2 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 3 | GO:0080167: response to karrikin | 6.73E-08 |
| 4 | GO:0009813: flavonoid biosynthetic process | 3.48E-07 |
| 5 | GO:0009629: response to gravity | 1.00E-04 |
| 6 | GO:2000123: positive regulation of stomatal complex development | 1.00E-04 |
| 7 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 1.00E-04 |
| 8 | GO:2000038: regulation of stomatal complex development | 3.43E-04 |
| 9 | GO:0051567: histone H3-K9 methylation | 3.43E-04 |
| 10 | GO:0006749: glutathione metabolic process | 3.43E-04 |
| 11 | GO:0016123: xanthophyll biosynthetic process | 4.37E-04 |
| 12 | GO:0010375: stomatal complex patterning | 4.37E-04 |
| 13 | GO:0009407: toxin catabolic process | 5.04E-04 |
| 14 | GO:0017148: negative regulation of translation | 6.40E-04 |
| 15 | GO:0009554: megasporogenesis | 6.40E-04 |
| 16 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 6.40E-04 |
| 17 | GO:0045814: negative regulation of gene expression, epigenetic | 6.40E-04 |
| 18 | GO:0006880: intracellular sequestering of iron ion | 7.49E-04 |
| 19 | GO:0006826: iron ion transport | 7.49E-04 |
| 20 | GO:0009636: response to toxic substance | 8.22E-04 |
| 21 | GO:0031540: regulation of anthocyanin biosynthetic process | 8.61E-04 |
| 22 | GO:0009733: response to auxin | 9.02E-04 |
| 23 | GO:0048193: Golgi vesicle transport | 9.77E-04 |
| 24 | GO:0008152: metabolic process | 9.79E-04 |
| 25 | GO:0010224: response to UV-B | 1.01E-03 |
| 26 | GO:0051555: flavonol biosynthetic process | 1.35E-03 |
| 27 | GO:0019684: photosynthesis, light reaction | 1.49E-03 |
| 28 | GO:0006879: cellular iron ion homeostasis | 1.49E-03 |
| 29 | GO:0016925: protein sumoylation | 1.63E-03 |
| 30 | GO:0009767: photosynthetic electron transport chain | 1.77E-03 |
| 31 | GO:0010039: response to iron ion | 2.07E-03 |
| 32 | GO:0019953: sexual reproduction | 2.55E-03 |
| 33 | GO:0006306: DNA methylation | 2.72E-03 |
| 34 | GO:0009411: response to UV | 3.06E-03 |
| 35 | GO:0010214: seed coat development | 3.24E-03 |
| 36 | GO:0006284: base-excision repair | 3.24E-03 |
| 37 | GO:0016117: carotenoid biosynthetic process | 3.42E-03 |
| 38 | GO:0000271: polysaccharide biosynthetic process | 3.61E-03 |
| 39 | GO:0006342: chromatin silencing | 3.80E-03 |
| 40 | GO:0045489: pectin biosynthetic process | 3.80E-03 |
| 41 | GO:0055072: iron ion homeostasis | 4.19E-03 |
| 42 | GO:0000302: response to reactive oxygen species | 4.38E-03 |
| 43 | GO:1901657: glycosyl compound metabolic process | 4.79E-03 |
| 44 | GO:0009828: plant-type cell wall loosening | 5.00E-03 |
| 45 | GO:0016125: sterol metabolic process | 5.00E-03 |
| 46 | GO:0007267: cell-cell signaling | 5.21E-03 |
| 47 | GO:0010411: xyloglucan metabolic process | 6.31E-03 |
| 48 | GO:0009753: response to jasmonic acid | 6.98E-03 |
| 49 | GO:0010218: response to far red light | 7.25E-03 |
| 50 | GO:0016051: carbohydrate biosynthetic process | 7.99E-03 |
| 51 | GO:0006631: fatty acid metabolic process | 9.01E-03 |
| 52 | GO:0010114: response to red light | 9.53E-03 |
| 53 | GO:0009926: auxin polar transport | 9.53E-03 |
| 54 | GO:0009744: response to sucrose | 9.53E-03 |
| 55 | GO:0042546: cell wall biogenesis | 9.80E-03 |
| 56 | GO:0031347: regulation of defense response | 1.09E-02 |
| 57 | GO:0009416: response to light stimulus | 1.16E-02 |
| 58 | GO:0009611: response to wounding | 1.18E-02 |
| 59 | GO:0009809: lignin biosynthetic process | 1.18E-02 |
| 60 | GO:0009909: regulation of flower development | 1.26E-02 |
| 61 | GO:0051726: regulation of cell cycle | 1.57E-02 |
| 62 | GO:0055114: oxidation-reduction process | 1.76E-02 |
| 63 | GO:0009845: seed germination | 1.87E-02 |
| 64 | GO:0007623: circadian rhythm | 2.22E-02 |
| 65 | GO:0071555: cell wall organization | 2.35E-02 |
| 66 | GO:0006979: response to oxidative stress | 2.37E-02 |
| 67 | GO:0009739: response to gibberellin | 2.41E-02 |
| 68 | GO:0006470: protein dephosphorylation | 2.45E-02 |
| 69 | GO:0009826: unidimensional cell growth | 2.95E-02 |
| 70 | GO:0009860: pollen tube growth | 3.20E-02 |
| 71 | GO:0007049: cell cycle | 3.28E-02 |
| 72 | GO:0009723: response to ethylene | 3.37E-02 |
| 73 | GO:0048366: leaf development | 3.41E-02 |
| 74 | GO:0006810: transport | 3.45E-02 |
| 75 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.63E-02 |
| 76 | GO:0015979: photosynthesis | 3.89E-02 |
| 77 | GO:0016042: lipid catabolic process | 4.57E-02 |
| 78 | GO:0009751: response to salicylic acid | 4.62E-02 |
| 79 | GO:0006281: DNA repair | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 2 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 3 | GO:0045430: chalcone isomerase activity | 1.91E-06 |
| 4 | GO:0045486: naringenin 3-dioxygenase activity | 4.04E-05 |
| 5 | GO:0010313: phytochrome binding | 4.04E-05 |
| 6 | GO:0010291: carotene beta-ring hydroxylase activity | 1.00E-04 |
| 7 | GO:0019901: protein kinase binding | 2.26E-04 |
| 8 | GO:0008199: ferric iron binding | 2.55E-04 |
| 9 | GO:0004322: ferroxidase activity | 2.55E-04 |
| 10 | GO:0048027: mRNA 5'-UTR binding | 2.55E-04 |
| 11 | GO:0031386: protein tag | 4.37E-04 |
| 12 | GO:0045431: flavonol synthase activity | 4.37E-04 |
| 13 | GO:0008725: DNA-3-methyladenine glycosylase activity | 4.37E-04 |
| 14 | GO:0080030: methyl indole-3-acetate esterase activity | 5.37E-04 |
| 15 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 6.40E-04 |
| 16 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 6.40E-04 |
| 17 | GO:0004364: glutathione transferase activity | 7.07E-04 |
| 18 | GO:0043295: glutathione binding | 7.49E-04 |
| 19 | GO:0016621: cinnamoyl-CoA reductase activity | 7.49E-04 |
| 20 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 8.61E-04 |
| 21 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.74E-03 |
| 22 | GO:0031418: L-ascorbic acid binding | 2.39E-03 |
| 23 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.89E-03 |
| 24 | GO:0016788: hydrolase activity, acting on ester bonds | 3.64E-03 |
| 25 | GO:0005506: iron ion binding | 4.22E-03 |
| 26 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.38E-03 |
| 27 | GO:0004518: nuclease activity | 4.58E-03 |
| 28 | GO:0016757: transferase activity, transferring glycosyl groups | 4.80E-03 |
| 29 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.21E-03 |
| 30 | GO:0016597: amino acid binding | 5.42E-03 |
| 31 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.31E-03 |
| 32 | GO:0102483: scopolin beta-glucosidase activity | 6.31E-03 |
| 33 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 7.25E-03 |
| 34 | GO:0008422: beta-glucosidase activity | 8.49E-03 |
| 35 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.41E-02 |
| 36 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.41E-02 |
| 37 | GO:0016758: transferase activity, transferring hexosyl groups | 1.74E-02 |
| 38 | GO:0008194: UDP-glycosyltransferase activity | 2.41E-02 |
| 39 | GO:0046982: protein heterodimerization activity | 2.99E-02 |
| 40 | GO:0003682: chromatin binding | 3.16E-02 |
| 41 | GO:0004497: monooxygenase activity | 3.54E-02 |
| 42 | GO:0020037: heme binding | 3.70E-02 |
| 43 | GO:0052689: carboxylic ester hydrolase activity | 3.80E-02 |
| 44 | GO:0004871: signal transducer activity | 4.16E-02 |
| 45 | GO:0004722: protein serine/threonine phosphatase activity | 4.30E-02 |
| 46 | GO:0016787: hydrolase activity | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 4.04E-05 |
| 2 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 1.73E-04 |
| 3 | GO:0030095: chloroplast photosystem II | 1.92E-03 |
| 4 | GO:0009705: plant-type vacuole membrane | 2.32E-03 |
| 5 | GO:0009654: photosystem II oxygen evolving complex | 2.55E-03 |
| 6 | GO:0031225: anchored component of membrane | 3.09E-03 |
| 7 | GO:0019898: extrinsic component of membrane | 4.19E-03 |
| 8 | GO:0010319: stromule | 5.21E-03 |
| 9 | GO:0000786: nucleosome | 7.74E-03 |
| 10 | GO:0009941: chloroplast envelope | 7.84E-03 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 1.77E-02 |
| 12 | GO:0005576: extracellular region | 3.42E-02 |
| 13 | GO:0031969: chloroplast membrane | 3.54E-02 |
| 14 | GO:0005783: endoplasmic reticulum | 4.95E-02 |