GO Enrichment Analysis of Co-expressed Genes with
AT3G19640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034213: quinolinate catabolic process | 0.00E+00 |
| 2 | GO:0019303: D-ribose catabolic process | 0.00E+00 |
| 3 | GO:0046740: transport of virus in host, cell to cell | 1.03E-05 |
| 4 | GO:0010071: root meristem specification | 3.02E-05 |
| 5 | GO:0009435: NAD biosynthetic process | 5.67E-05 |
| 6 | GO:0045116: protein neddylation | 5.67E-05 |
| 7 | GO:0046835: carbohydrate phosphorylation | 8.84E-05 |
| 8 | GO:0009423: chorismate biosynthetic process | 8.84E-05 |
| 9 | GO:0010078: maintenance of root meristem identity | 1.24E-04 |
| 10 | GO:0010492: maintenance of shoot apical meristem identity | 1.24E-04 |
| 11 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.24E-04 |
| 12 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.44E-04 |
| 13 | GO:0009073: aromatic amino acid family biosynthetic process | 2.27E-04 |
| 14 | GO:0009116: nucleoside metabolic process | 3.67E-04 |
| 15 | GO:0007131: reciprocal meiotic recombination | 4.44E-04 |
| 16 | GO:0080022: primary root development | 5.49E-04 |
| 17 | GO:0008033: tRNA processing | 5.49E-04 |
| 18 | GO:0080156: mitochondrial mRNA modification | 6.61E-04 |
| 19 | GO:0010252: auxin homeostasis | 7.48E-04 |
| 20 | GO:0009965: leaf morphogenesis | 1.47E-03 |
| 21 | GO:0031347: regulation of defense response | 1.54E-03 |
| 22 | GO:0009793: embryo development ending in seed dormancy | 2.94E-03 |
| 23 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.26E-03 |
| 24 | GO:0010468: regulation of gene expression | 3.41E-03 |
| 25 | GO:0009408: response to heat | 6.15E-03 |
| 26 | GO:0006281: DNA repair | 6.15E-03 |
| 27 | GO:0009734: auxin-activated signaling pathway | 7.80E-03 |
| 28 | GO:0009735: response to cytokinin | 8.61E-03 |
| 29 | GO:0006457: protein folding | 1.10E-02 |
| 30 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.14E-02 |
| 31 | GO:0009414: response to water deprivation | 1.48E-02 |
| 32 | GO:0007275: multicellular organism development | 2.45E-02 |
| 33 | GO:0016567: protein ubiquitination | 3.34E-02 |
| 34 | GO:0055114: oxidation-reduction process | 3.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003856: 3-dehydroquinate synthase activity | 0.00E+00 |
| 2 | GO:0019781: NEDD8 activating enzyme activity | 1.03E-05 |
| 3 | GO:0004514: nicotinate-nucleotide diphosphorylase (carboxylating) activity | 1.03E-05 |
| 4 | GO:0008253: 5'-nucleotidase activity | 1.93E-05 |
| 5 | GO:0008641: small protein activating enzyme activity | 5.67E-05 |
| 6 | GO:0004656: procollagen-proline 4-dioxygenase activity | 8.84E-05 |
| 7 | GO:0004747: ribokinase activity | 8.84E-05 |
| 8 | GO:0031072: heat shock protein binding | 2.72E-04 |
| 9 | GO:0046872: metal ion binding | 2.86E-04 |
| 10 | GO:0031418: L-ascorbic acid binding | 3.67E-04 |
| 11 | GO:0010181: FMN binding | 6.04E-04 |
| 12 | GO:0000166: nucleotide binding | 6.66E-04 |
| 13 | GO:0003697: single-stranded DNA binding | 1.15E-03 |
| 14 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.15E-03 |
| 15 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.25E-03 |
| 16 | GO:0043621: protein self-association | 1.43E-03 |
| 17 | GO:0051082: unfolded protein binding | 2.09E-03 |
| 18 | GO:0016829: lyase activity | 2.56E-03 |
| 19 | GO:0046982: protein heterodimerization activity | 4.01E-03 |
| 20 | GO:0042803: protein homodimerization activity | 5.50E-03 |
| 21 | GO:0003723: RNA binding | 9.88E-03 |
| 22 | GO:0005507: copper ion binding | 1.18E-02 |
| 23 | GO:0005506: iron ion binding | 1.49E-02 |
| 24 | GO:0016491: oxidoreductase activity | 1.84E-02 |
| 25 | GO:0003729: mRNA binding | 2.00E-02 |
| 26 | GO:0005524: ATP binding | 2.71E-02 |
| 27 | GO:0005515: protein binding | 3.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005672: transcription factor TFIIA complex | 1.93E-05 |
| 2 | GO:0042646: plastid nucleoid | 3.02E-05 |
| 3 | GO:0031595: nuclear proteasome complex | 1.06E-04 |
| 4 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.27E-04 |
| 5 | GO:0000502: proteasome complex | 1.65E-03 |
| 6 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.33E-03 |
| 7 | GO:0009570: chloroplast stroma | 8.29E-03 |
| 8 | GO:0005802: trans-Golgi network | 1.28E-02 |
| 9 | GO:0005768: endosome | 1.40E-02 |
| 10 | GO:0009536: plastid | 1.75E-02 |
| 11 | GO:0005789: endoplasmic reticulum membrane | 2.04E-02 |
| 12 | GO:0005794: Golgi apparatus | 2.28E-02 |