co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G18270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0006105: succinate metabolic process	0.00E+00
3	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
4	GO:0019484: beta-alanine catabolic process	0.00E+00
5	GO:0006480: N-terminal protein amino acid methylation	0.00E+00
6	GO:0006468: protein phosphorylation	7.25E-05
7	GO:0006540: glutamate decarboxylation to succinate	1.52E-04
8	GO:0046167: glycerol-3-phosphate biosynthetic process	1.52E-04
9	GO:0009450: gamma-aminobutyric acid catabolic process	1.52E-04
10	GO:1990641: response to iron ion starvation	1.52E-04
11	GO:1902265: abscisic acid homeostasis	1.52E-04
12	GO:0071366: cellular response to indolebutyric acid stimulus	1.52E-04
13	GO:0009865: pollen tube adhesion	1.52E-04
14	GO:0052544: defense response by callose deposition in cell wall	2.75E-04
15	GO:2000693: positive regulation of seed maturation	3.47E-04
16	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	3.47E-04
17	GO:0006521: regulation of cellular amino acid metabolic process	3.47E-04
18	GO:0010033: response to organic substance	3.47E-04
19	GO:0006641: triglyceride metabolic process	3.47E-04
20	GO:0009727: detection of ethylene stimulus	3.47E-04
21	GO:0006101: citrate metabolic process	3.47E-04
22	GO:0002237: response to molecule of bacterial origin	4.07E-04
23	GO:0006517: protein deglycosylation	5.68E-04
24	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	5.68E-04
25	GO:0042344: indole glucosinolate catabolic process	5.68E-04
26	GO:0006013: mannose metabolic process	5.68E-04
27	GO:0006954: inflammatory response	5.68E-04
28	GO:0019563: glycerol catabolic process	5.68E-04
29	GO:1900140: regulation of seedling development	5.68E-04
30	GO:0006882: cellular zinc ion homeostasis	8.13E-04
31	GO:0006624: vacuolar protein processing	8.13E-04
32	GO:0048194: Golgi vesicle budding	8.13E-04
33	GO:0006020: inositol metabolic process	8.13E-04
34	GO:1901000: regulation of response to salt stress	8.13E-04
35	GO:0070301: cellular response to hydrogen peroxide	8.13E-04
36	GO:0010601: positive regulation of auxin biosynthetic process	8.13E-04
37	GO:0006072: glycerol-3-phosphate metabolic process	8.13E-04
38	GO:0015749: monosaccharide transport	8.13E-04
39	GO:0009399: nitrogen fixation	8.13E-04
40	GO:0009113: purine nucleobase biosynthetic process	8.13E-04
41	GO:0048367: shoot system development	8.97E-04
42	GO:0007165: signal transduction	9.21E-04
43	GO:0010188: response to microbial phytotoxin	1.08E-03
44	GO:0006878: cellular copper ion homeostasis	1.08E-03
45	GO:0006542: glutamine biosynthetic process	1.08E-03
46	GO:0006646: phosphatidylethanolamine biosynthetic process	1.08E-03
47	GO:0009687: abscisic acid metabolic process	1.08E-03
48	GO:0006536: glutamate metabolic process	1.08E-03
49	GO:1990937: xylan acetylation	1.08E-03
50	GO:0046323: glucose import	1.09E-03
51	GO:0048544: recognition of pollen	1.17E-03
52	GO:0008654: phospholipid biosynthetic process	1.25E-03
53	GO:0043097: pyrimidine nucleoside salvage	1.36E-03
54	GO:0009635: response to herbicide	1.67E-03
55	GO:0050665: hydrogen peroxide biosynthetic process	1.67E-03
56	GO:0015691: cadmium ion transport	1.67E-03
57	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.67E-03
58	GO:0042732: D-xylose metabolic process	1.67E-03
59	GO:0006206: pyrimidine nucleobase metabolic process	1.67E-03
60	GO:0045491: xylan metabolic process	1.67E-03
61	GO:0001666: response to hypoxia	1.92E-03
62	GO:0010044: response to aluminum ion	2.36E-03
63	GO:0009395: phospholipid catabolic process	2.36E-03
64	GO:0048437: floral organ development	2.36E-03
65	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.36E-03
66	GO:0071669: plant-type cell wall organization or biogenesis	2.36E-03
67	GO:0009396: folic acid-containing compound biosynthetic process	2.36E-03
68	GO:0009651: response to salt stress	2.61E-03
69	GO:0006605: protein targeting	2.73E-03
70	GO:0006102: isocitrate metabolic process	2.73E-03
71	GO:0016559: peroxisome fission	2.73E-03
72	GO:0006644: phospholipid metabolic process	2.73E-03
73	GO:0009061: anaerobic respiration	2.73E-03
74	GO:0009819: drought recovery	2.73E-03
75	GO:0006491: N-glycan processing	2.73E-03
76	GO:0009690: cytokinin metabolic process	2.73E-03
77	GO:0006811: ion transport	2.75E-03
78	GO:0042742: defense response to bacterium	2.94E-03
79	GO:0001510: RNA methylation	3.12E-03
80	GO:0010262: somatic embryogenesis	3.12E-03
81	GO:0006099: tricarboxylic acid cycle	3.29E-03
82	GO:0006098: pentose-phosphate shunt	3.53E-03
83	GO:0046916: cellular transition metal ion homeostasis	3.53E-03
84	GO:0042542: response to hydrogen peroxide	3.89E-03
85	GO:0035999: tetrahydrofolate interconversion	3.96E-03
86	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.96E-03
87	GO:0009970: cellular response to sulfate starvation	4.40E-03
88	GO:0006995: cellular response to nitrogen starvation	4.40E-03
89	GO:0006535: cysteine biosynthetic process from serine	4.40E-03
90	GO:0016485: protein processing	4.86E-03
91	GO:0080167: response to karrikin	4.91E-03
92	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.34E-03
93	GO:0006417: regulation of translation	6.04E-03
94	GO:0006541: glutamine metabolic process	6.33E-03
95	GO:0046686: response to cadmium ion	6.38E-03
96	GO:0010030: positive regulation of seed germination	6.86E-03
97	GO:0046854: phosphatidylinositol phosphorylation	6.86E-03
98	GO:0009969: xyloglucan biosynthetic process	6.86E-03
99	GO:0007031: peroxisome organization	6.86E-03
100	GO:0005985: sucrose metabolic process	6.86E-03
101	GO:0009626: plant-type hypersensitive response	6.87E-03
102	GO:0000162: tryptophan biosynthetic process	7.40E-03
103	GO:0006487: protein N-linked glycosylation	7.95E-03
104	GO:0019344: cysteine biosynthetic process	7.95E-03
105	GO:0018105: peptidyl-serine phosphorylation	7.99E-03
106	GO:0048364: root development	8.50E-03
107	GO:0031408: oxylipin biosynthetic process	9.10E-03
108	GO:0031348: negative regulation of defense response	9.69E-03
109	GO:0071456: cellular response to hypoxia	9.69E-03
110	GO:0035428: hexose transmembrane transport	9.69E-03
111	GO:0001944: vasculature development	1.03E-02
112	GO:0009625: response to insect	1.03E-02
113	GO:0071215: cellular response to abscisic acid stimulus	1.03E-02
114	GO:0045492: xylan biosynthetic process	1.09E-02
115	GO:0009737: response to abscisic acid	1.10E-02
116	GO:0009790: embryo development	1.14E-02
117	GO:0042147: retrograde transport, endosome to Golgi	1.16E-02
118	GO:0000271: polysaccharide biosynthetic process	1.22E-02
119	GO:0080022: primary root development	1.22E-02
120	GO:0015991: ATP hydrolysis coupled proton transport	1.22E-02
121	GO:0042631: cellular response to water deprivation	1.22E-02
122	GO:0042391: regulation of membrane potential	1.22E-02
123	GO:0010182: sugar mediated signaling pathway	1.29E-02
124	GO:0008360: regulation of cell shape	1.29E-02
125	GO:0010154: fruit development	1.29E-02
126	GO:0010150: leaf senescence	1.34E-02
127	GO:0009733: response to auxin	1.34E-02
128	GO:0009556: microsporogenesis	1.42E-02
129	GO:0010183: pollen tube guidance	1.42E-02
130	GO:0006635: fatty acid beta-oxidation	1.50E-02
131	GO:0007166: cell surface receptor signaling pathway	1.54E-02
132	GO:0010583: response to cyclopentenone	1.57E-02
133	GO:0071281: cellular response to iron ion	1.64E-02
134	GO:0006914: autophagy	1.71E-02
135	GO:0010286: heat acclimation	1.79E-02
136	GO:0035556: intracellular signal transduction	1.79E-02
137	GO:0051607: defense response to virus	1.86E-02
138	GO:0016579: protein deubiquitination	1.86E-02
139	GO:0006810: transport	2.00E-02
140	GO:0009627: systemic acquired resistance	2.10E-02
141	GO:0042128: nitrate assimilation	2.10E-02
142	GO:0048573: photoperiodism, flowering	2.18E-02
143	GO:0006950: response to stress	2.18E-02
144	GO:0008219: cell death	2.34E-02
145	GO:0009817: defense response to fungus, incompatible interaction	2.34E-02
146	GO:0030244: cellulose biosynthetic process	2.34E-02
147	GO:0009723: response to ethylene	2.41E-02
148	GO:0048767: root hair elongation	2.43E-02
149	GO:0010311: lateral root formation	2.43E-02
150	GO:0009832: plant-type cell wall biogenesis	2.43E-02
151	GO:0009834: plant-type secondary cell wall biogenesis	2.51E-02
152	GO:0010043: response to zinc ion	2.60E-02
153	GO:0010119: regulation of stomatal movement	2.60E-02
154	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.68E-02
155	GO:0006865: amino acid transport	2.69E-02
156	GO:0030001: metal ion transport	3.05E-02
157	GO:0051707: response to other organism	3.32E-02
158	GO:0008283: cell proliferation	3.32E-02
159	GO:0006869: lipid transport	3.39E-02
160	GO:0006855: drug transmembrane transport	3.71E-02
161	GO:0016042: lipid catabolic process	3.71E-02
162	GO:0000165: MAPK cascade	3.81E-02
163	GO:0042538: hyperosmotic salinity response	3.91E-02
164	GO:0051603: proteolysis involved in cellular protein catabolic process	4.21E-02
165	GO:0016310: phosphorylation	4.23E-02
166	GO:0006857: oligopeptide transport	4.31E-02
167	GO:0048316: seed development	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0004370: glycerol kinase activity	0.00E+00
4	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
5	GO:0004694: eukaryotic translation initiation factor 2alpha kinase activity	0.00E+00
6	GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity	0.00E+00
7	GO:0009045: xylose isomerase activity	0.00E+00
8	GO:0005524: ATP binding	2.60E-07
9	GO:0016301: kinase activity	1.07E-05
10	GO:0050897: cobalt ion binding	1.96E-05
11	GO:0009679: hexose:proton symporter activity	1.52E-04
12	GO:0046870: cadmium ion binding	1.52E-04
13	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.52E-04
14	GO:0003867: 4-aminobutyrate transaminase activity	1.52E-04
15	GO:0050200: plasmalogen synthase activity	1.52E-04
16	GO:0019200: carbohydrate kinase activity	3.47E-04
17	GO:0032791: lead ion binding	3.47E-04
18	GO:0004609: phosphatidylserine decarboxylase activity	3.47E-04
19	GO:0003994: aconitate hydratase activity	3.47E-04
20	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	3.47E-04
21	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	3.47E-04
22	GO:0004839: ubiquitin activating enzyme activity	3.47E-04
23	GO:0038199: ethylene receptor activity	3.47E-04
24	GO:0004329: formate-tetrahydrofolate ligase activity	3.47E-04
25	GO:0004175: endopeptidase activity	4.07E-04
26	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.81E-04
27	GO:0004096: catalase activity	5.68E-04
28	GO:0005047: signal recognition particle binding	5.68E-04
29	GO:0004674: protein serine/threonine kinase activity	6.80E-04
30	GO:0051740: ethylene binding	8.13E-04
31	GO:0048027: mRNA 5'-UTR binding	8.13E-04
32	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	8.13E-04
33	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	8.13E-04
34	GO:0015086: cadmium ion transmembrane transporter activity	8.13E-04
35	GO:0004108: citrate (Si)-synthase activity	8.13E-04
36	GO:0004834: tryptophan synthase activity	1.08E-03
37	GO:0004737: pyruvate decarboxylase activity	1.08E-03
38	GO:0004356: glutamate-ammonia ligase activity	1.36E-03
39	GO:0010294: abscisic acid glucosyltransferase activity	1.36E-03
40	GO:0015145: monosaccharide transmembrane transporter activity	1.36E-03
41	GO:0008641: small protein activating enzyme activity	1.36E-03
42	GO:0030976: thiamine pyrophosphate binding	1.67E-03
43	GO:0004629: phospholipase C activity	1.67E-03
44	GO:0000293: ferric-chelate reductase activity	1.67E-03
45	GO:0004435: phosphatidylinositol phospholipase C activity	2.01E-03
46	GO:0004559: alpha-mannosidase activity	2.01E-03
47	GO:0004124: cysteine synthase activity	2.01E-03
48	GO:0070300: phosphatidic acid binding	2.01E-03
49	GO:0004012: phospholipid-translocating ATPase activity	2.01E-03
50	GO:0051753: mannan synthase activity	2.01E-03
51	GO:0004849: uridine kinase activity	2.01E-03
52	GO:0004620: phospholipase activity	2.36E-03
53	GO:0016831: carboxy-lyase activity	2.36E-03
54	GO:0004525: ribonuclease III activity	2.73E-03
55	GO:0042802: identical protein binding	2.91E-03
56	GO:0004673: protein histidine kinase activity	4.40E-03
57	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	4.40E-03
58	GO:0004713: protein tyrosine kinase activity	4.40E-03
59	GO:0047372: acylglycerol lipase activity	4.86E-03
60	GO:0000049: tRNA binding	5.34E-03
61	GO:0004672: protein kinase activity	5.76E-03
62	GO:0000155: phosphorelay sensor kinase activity	5.83E-03
63	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.83E-03
64	GO:0015171: amino acid transmembrane transporter activity	6.04E-03
65	GO:0030246: carbohydrate binding	6.04E-03
66	GO:0045735: nutrient reservoir activity	6.45E-03
67	GO:0005507: copper ion binding	6.58E-03
68	GO:0030552: cAMP binding	6.86E-03
69	GO:0030553: cGMP binding	6.86E-03
70	GO:0043424: protein histidine kinase binding	8.51E-03
71	GO:0005216: ion channel activity	8.51E-03
72	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	9.10E-03
73	GO:0004707: MAP kinase activity	9.10E-03
74	GO:0016760: cellulose synthase (UDP-forming) activity	1.03E-02
75	GO:0030170: pyridoxal phosphate binding	1.08E-02
76	GO:0015144: carbohydrate transmembrane transporter activity	1.16E-02
77	GO:0005249: voltage-gated potassium channel activity	1.22E-02
78	GO:0030551: cyclic nucleotide binding	1.22E-02
79	GO:0005351: sugar:proton symporter activity	1.31E-02
80	GO:0005215: transporter activity	1.31E-02
81	GO:0005355: glucose transmembrane transporter activity	1.36E-02
82	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.50E-02
83	GO:0004197: cysteine-type endopeptidase activity	1.57E-02
84	GO:0000156: phosphorelay response regulator activity	1.64E-02
85	GO:0016759: cellulose synthase activity	1.71E-02
86	GO:0000287: magnesium ion binding	2.05E-02
87	GO:0016740: transferase activity	2.15E-02
88	GO:0030247: polysaccharide binding	2.18E-02
89	GO:0005096: GTPase activator activity	2.43E-02
90	GO:0005516: calmodulin binding	2.79E-02
91	GO:0003993: acid phosphatase activity	2.86E-02
92	GO:0008422: beta-glucosidase activity	2.95E-02
93	GO:0051539: 4 iron, 4 sulfur cluster binding	3.05E-02
94	GO:0016298: lipase activity	4.21E-02
95	GO:0031625: ubiquitin protein ligase binding	4.42E-02
96	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.95E-02
97	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	6.83E-11
3	GO:0016021: integral component of membrane	4.80E-06
4	GO:0000323: lytic vacuole	8.13E-04
5	GO:0010008: endosome membrane	8.97E-04
6	GO:0005776: autophagosome	1.08E-03
7	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.08E-03
8	GO:0005777: peroxisome	1.09E-03
9	GO:0005794: Golgi apparatus	1.31E-03
10	GO:0030173: integral component of Golgi membrane	2.01E-03
11	GO:0005774: vacuolar membrane	2.80E-03
12	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.12E-03
13	GO:0005779: integral component of peroxisomal membrane	3.12E-03
14	GO:0009506: plasmodesma	3.41E-03
15	GO:0016020: membrane	4.07E-03
16	GO:0005783: endoplasmic reticulum	4.68E-03
17	GO:0016602: CCAAT-binding factor complex	5.83E-03
18	GO:0005773: vacuole	7.04E-03
19	GO:0005802: trans-Golgi network	7.87E-03
20	GO:0031410: cytoplasmic vesicle	9.69E-03
21	GO:0031965: nuclear membrane	1.42E-02
22	GO:0005778: peroxisomal membrane	1.79E-02
23	GO:0005789: endoplasmic reticulum membrane	2.12E-02
24	GO:0005618: cell wall	3.15E-02
25	GO:0005768: endosome	3.54E-02
26	GO:0031966: mitochondrial membrane	3.91E-02
27	GO:0043231: intracellular membrane-bounded organelle	4.20E-02