co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G18060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033206: meiotic cytokinesis	1.91E-06
2	GO:0035304: regulation of protein dephosphorylation	5.40E-06
3	GO:0010218: response to far red light	7.64E-06
4	GO:0042549: photosystem II stabilization	3.99E-05
5	GO:0042176: regulation of protein catabolic process	3.99E-05
6	GO:2000033: regulation of seed dormancy process	4.94E-05
7	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	7.04E-05
8	GO:0010206: photosystem II repair	9.36E-05
9	GO:0010205: photoinhibition	1.06E-04
10	GO:0019684: photosynthesis, light reaction	1.32E-04
11	GO:0010207: photosystem II assembly	1.74E-04
12	GO:2000377: regulation of reactive oxygen species metabolic process	2.19E-04
13	GO:0009863: salicylic acid mediated signaling pathway	2.19E-04
14	GO:0010187: negative regulation of seed germination	2.19E-04
15	GO:0009768: photosynthesis, light harvesting in photosystem I	2.34E-04
16	GO:0010029: regulation of seed germination	5.30E-04
17	GO:0016311: dephosphorylation	5.88E-04
18	GO:0018298: protein-chromophore linkage	6.07E-04
19	GO:0009867: jasmonic acid mediated signaling pathway	7.07E-04
20	GO:0009637: response to blue light	7.07E-04
21	GO:0010114: response to red light	8.33E-04
22	GO:0009640: photomorphogenesis	8.33E-04
23	GO:0042538: hyperosmotic salinity response	9.62E-04
24	GO:0009740: gibberellic acid mediated signaling pathway	1.21E-03
25	GO:0006470: protein dephosphorylation	1.98E-03
26	GO:0009723: response to ethylene	2.67E-03
27	GO:0015979: photosynthesis	3.06E-03
28	GO:0042742: defense response to bacterium	8.81E-03
29	GO:0009733: response to auxin	9.56E-03
30	GO:0005975: carbohydrate metabolic process	1.18E-02
31	GO:0007275: multicellular organism development	1.42E-02
32	GO:0009737: response to abscisic acid	1.50E-02
33	GO:0009651: response to salt stress	2.08E-02
34	GO:0006351: transcription, DNA-templated	3.23E-02
35	GO:0006355: regulation of transcription, DNA-templated	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	1.91E-06
2	GO:0010242: oxygen evolving activity	1.91E-06
3	GO:0000989: transcription factor activity, transcription factor binding	9.36E-05
4	GO:0008266: poly(U) RNA binding	1.74E-04
5	GO:0031409: pigment binding	2.04E-04
6	GO:0048038: quinone binding	4.02E-04
7	GO:0016168: chlorophyll binding	5.30E-04
8	GO:0003993: acid phosphatase activity	7.28E-04
9	GO:0043565: sequence-specific DNA binding	2.93E-03
10	GO:0004871: signal transducer activity	3.26E-03
11	GO:0004722: protein serine/threonine phosphatase activity	3.36E-03
12	GO:0008289: lipid binding	4.57E-03
13	GO:0005509: calcium ion binding	8.33E-03
14	GO:0044212: transcription regulatory region DNA binding	8.81E-03
15	GO:0046872: metal ion binding	2.10E-02
16	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.14E-02

Rank	GO Term	Adjusted P value
1	GO:0009579: thylakoid	1.06E-05
2	GO:0009534: chloroplast thylakoid	1.07E-05
3	GO:0031977: thylakoid lumen	1.13E-05
4	GO:0055035: plastid thylakoid membrane	3.12E-05
5	GO:0010287: plastoglobule	3.42E-05
6	GO:0009543: chloroplast thylakoid lumen	3.66E-05
7	GO:0009535: chloroplast thylakoid membrane	8.63E-05
8	GO:0030095: chloroplast photosystem II	1.74E-04
9	GO:0030076: light-harvesting complex	1.88E-04
10	GO:0009654: photosystem II oxygen evolving complex	2.34E-04
11	GO:0009532: plastid stroma	2.50E-04
12	GO:0009522: photosystem I	3.66E-04
13	GO:0009523: photosystem II	3.84E-04
14	GO:0019898: extrinsic component of membrane	3.84E-04
15	GO:0046658: anchored component of plasma membrane	2.18E-03
16	GO:0031225: anchored component of membrane	7.34E-03
17	GO:0048046: apoplast	2.20E-02
18	GO:0016021: integral component of membrane	2.36E-02
19	GO:0009941: chloroplast envelope	2.65E-02
20	GO:0005773: vacuole	2.89E-02
21	GO:0009570: chloroplast stroma	3.36E-02