GO Enrichment Analysis of Co-expressed Genes with
AT3G17040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 2 | GO:0046677: response to antibiotic | 0.00E+00 |
| 3 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 4 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 5 | GO:0009661: chromoplast organization | 0.00E+00 |
| 6 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 7 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 1.77E-09 |
| 9 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.64E-05 |
| 10 | GO:0050821: protein stabilization | 6.58E-05 |
| 11 | GO:0015979: photosynthesis | 7.33E-05 |
| 12 | GO:0000476: maturation of 4.5S rRNA | 1.10E-04 |
| 13 | GO:0000967: rRNA 5'-end processing | 1.10E-04 |
| 14 | GO:0043007: maintenance of rDNA | 1.10E-04 |
| 15 | GO:0000305: response to oxygen radical | 1.10E-04 |
| 16 | GO:0043085: positive regulation of catalytic activity | 1.73E-04 |
| 17 | GO:0042548: regulation of photosynthesis, light reaction | 2.57E-04 |
| 18 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 2.57E-04 |
| 19 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.57E-04 |
| 20 | GO:0016122: xanthophyll metabolic process | 2.57E-04 |
| 21 | GO:0034470: ncRNA processing | 2.57E-04 |
| 22 | GO:0009640: photomorphogenesis | 2.70E-04 |
| 23 | GO:0051639: actin filament network formation | 6.10E-04 |
| 24 | GO:0009741: response to brassinosteroid | 7.18E-04 |
| 25 | GO:0030007: cellular potassium ion homeostasis | 8.10E-04 |
| 26 | GO:0006749: glutathione metabolic process | 8.10E-04 |
| 27 | GO:0042938: dipeptide transport | 8.10E-04 |
| 28 | GO:0051764: actin crosslink formation | 8.10E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 1.02E-03 |
| 30 | GO:0010117: photoprotection | 1.02E-03 |
| 31 | GO:0032973: amino acid export | 1.25E-03 |
| 32 | GO:0009228: thiamine biosynthetic process | 1.25E-03 |
| 33 | GO:0009643: photosynthetic acclimation | 1.25E-03 |
| 34 | GO:0010189: vitamin E biosynthetic process | 1.49E-03 |
| 35 | GO:0010019: chloroplast-nucleus signaling pathway | 1.49E-03 |
| 36 | GO:0019745: pentacyclic triterpenoid biosynthetic process | 1.75E-03 |
| 37 | GO:0050829: defense response to Gram-negative bacterium | 1.75E-03 |
| 38 | GO:0051510: regulation of unidimensional cell growth | 1.75E-03 |
| 39 | GO:0043090: amino acid import | 1.75E-03 |
| 40 | GO:1900056: negative regulation of leaf senescence | 1.75E-03 |
| 41 | GO:0009910: negative regulation of flower development | 1.86E-03 |
| 42 | GO:0005978: glycogen biosynthetic process | 2.03E-03 |
| 43 | GO:0009642: response to light intensity | 2.03E-03 |
| 44 | GO:0071482: cellular response to light stimulus | 2.32E-03 |
| 45 | GO:0048507: meristem development | 2.62E-03 |
| 46 | GO:0010206: photosystem II repair | 2.62E-03 |
| 47 | GO:0080144: amino acid homeostasis | 2.62E-03 |
| 48 | GO:0034765: regulation of ion transmembrane transport | 2.62E-03 |
| 49 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.93E-03 |
| 50 | GO:0009688: abscisic acid biosynthetic process | 3.25E-03 |
| 51 | GO:0045036: protein targeting to chloroplast | 3.25E-03 |
| 52 | GO:0045454: cell redox homeostasis | 3.51E-03 |
| 53 | GO:0030148: sphingolipid biosynthetic process | 3.59E-03 |
| 54 | GO:0015706: nitrate transport | 3.93E-03 |
| 55 | GO:0016925: protein sumoylation | 3.93E-03 |
| 56 | GO:0018107: peptidyl-threonine phosphorylation | 4.30E-03 |
| 57 | GO:0006094: gluconeogenesis | 4.30E-03 |
| 58 | GO:0007275: multicellular organism development | 4.37E-03 |
| 59 | GO:0006629: lipid metabolic process | 4.57E-03 |
| 60 | GO:0010207: photosystem II assembly | 4.66E-03 |
| 61 | GO:0009742: brassinosteroid mediated signaling pathway | 5.28E-03 |
| 62 | GO:0034976: response to endoplasmic reticulum stress | 5.44E-03 |
| 63 | GO:0051017: actin filament bundle assembly | 5.84E-03 |
| 64 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.25E-03 |
| 65 | GO:0016114: terpenoid biosynthetic process | 6.67E-03 |
| 66 | GO:0051260: protein homooligomerization | 6.67E-03 |
| 67 | GO:0010089: xylem development | 8.00E-03 |
| 68 | GO:0040008: regulation of growth | 8.20E-03 |
| 69 | GO:0070417: cellular response to cold | 8.46E-03 |
| 70 | GO:0007623: circadian rhythm | 8.60E-03 |
| 71 | GO:0010305: leaf vascular tissue pattern formation | 9.41E-03 |
| 72 | GO:0006662: glycerol ether metabolic process | 9.41E-03 |
| 73 | GO:0007018: microtubule-based movement | 9.91E-03 |
| 74 | GO:0009791: post-embryonic development | 1.04E-02 |
| 75 | GO:0019252: starch biosynthetic process | 1.04E-02 |
| 76 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.09E-02 |
| 77 | GO:0010193: response to ozone | 1.09E-02 |
| 78 | GO:0016032: viral process | 1.14E-02 |
| 79 | GO:0009826: unidimensional cell growth | 1.28E-02 |
| 80 | GO:0071805: potassium ion transmembrane transport | 1.30E-02 |
| 81 | GO:0009658: chloroplast organization | 1.33E-02 |
| 82 | GO:0010027: thylakoid membrane organization | 1.42E-02 |
| 83 | GO:0010029: regulation of seed germination | 1.47E-02 |
| 84 | GO:0016311: dephosphorylation | 1.65E-02 |
| 85 | GO:0018298: protein-chromophore linkage | 1.71E-02 |
| 86 | GO:0010218: response to far red light | 1.83E-02 |
| 87 | GO:0010119: regulation of stomatal movement | 1.89E-02 |
| 88 | GO:0007568: aging | 1.89E-02 |
| 89 | GO:0006865: amino acid transport | 1.96E-02 |
| 90 | GO:0009637: response to blue light | 2.02E-02 |
| 91 | GO:0034599: cellular response to oxidative stress | 2.09E-02 |
| 92 | GO:0055114: oxidation-reduction process | 2.16E-02 |
| 93 | GO:0006631: fatty acid metabolic process | 2.29E-02 |
| 94 | GO:0010114: response to red light | 2.42E-02 |
| 95 | GO:0008152: metabolic process | 2.70E-02 |
| 96 | GO:0009664: plant-type cell wall organization | 2.85E-02 |
| 97 | GO:0006364: rRNA processing | 2.99E-02 |
| 98 | GO:0009585: red, far-red light phototransduction | 2.99E-02 |
| 99 | GO:0006508: proteolysis | 3.06E-02 |
| 100 | GO:0010224: response to UV-B | 3.07E-02 |
| 101 | GO:0006857: oligopeptide transport | 3.14E-02 |
| 102 | GO:0009909: regulation of flower development | 3.22E-02 |
| 103 | GO:0043086: negative regulation of catalytic activity | 3.37E-02 |
| 104 | GO:0006096: glycolytic process | 3.37E-02 |
| 105 | GO:0009740: gibberellic acid mediated signaling pathway | 3.69E-02 |
| 106 | GO:0042545: cell wall modification | 3.77E-02 |
| 107 | GO:0009624: response to nematode | 3.85E-02 |
| 108 | GO:0005975: carbohydrate metabolic process | 3.88E-02 |
| 109 | GO:0018105: peptidyl-serine phosphorylation | 3.93E-02 |
| 110 | GO:0009555: pollen development | 4.33E-02 |
| 111 | GO:0035556: intracellular signal transduction | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015269: calcium-activated potassium channel activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 4 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 5 | GO:0016871: cycloartenol synthase activity | 0.00E+00 |
| 6 | GO:0034639: L-amino acid efflux transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0004462: lactoylglutathione lyase activity | 2.64E-05 |
| 8 | GO:0052631: sphingolipid delta-8 desaturase activity | 1.10E-04 |
| 9 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 1.10E-04 |
| 10 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.10E-04 |
| 11 | GO:0046906: tetrapyrrole binding | 1.10E-04 |
| 12 | GO:0019172: glyoxalase III activity | 2.57E-04 |
| 13 | GO:0004362: glutathione-disulfide reductase activity | 2.57E-04 |
| 14 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.57E-04 |
| 15 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 2.57E-04 |
| 16 | GO:0016805: dipeptidase activity | 4.25E-04 |
| 17 | GO:0004180: carboxypeptidase activity | 4.25E-04 |
| 18 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.25E-04 |
| 19 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 6.10E-04 |
| 20 | GO:0016851: magnesium chelatase activity | 6.10E-04 |
| 21 | GO:0019789: SUMO transferase activity | 6.10E-04 |
| 22 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 8.10E-04 |
| 23 | GO:0042936: dipeptide transporter activity | 8.10E-04 |
| 24 | GO:0016846: carbon-sulfur lyase activity | 1.02E-03 |
| 25 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.02E-03 |
| 26 | GO:0015271: outward rectifier potassium channel activity | 1.25E-03 |
| 27 | GO:0004332: fructose-bisphosphate aldolase activity | 1.25E-03 |
| 28 | GO:0019899: enzyme binding | 1.75E-03 |
| 29 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 1.75E-03 |
| 30 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 1.75E-03 |
| 31 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 2.03E-03 |
| 32 | GO:0005267: potassium channel activity | 2.32E-03 |
| 33 | GO:0008047: enzyme activator activity | 3.25E-03 |
| 34 | GO:0047372: acylglycerol lipase activity | 3.59E-03 |
| 35 | GO:0016874: ligase activity | 4.69E-03 |
| 36 | GO:0004190: aspartic-type endopeptidase activity | 5.04E-03 |
| 37 | GO:0031409: pigment binding | 5.44E-03 |
| 38 | GO:0003954: NADH dehydrogenase activity | 5.84E-03 |
| 39 | GO:0005216: ion channel activity | 6.25E-03 |
| 40 | GO:0035251: UDP-glucosyltransferase activity | 6.67E-03 |
| 41 | GO:0004176: ATP-dependent peptidase activity | 6.67E-03 |
| 42 | GO:0004674: protein serine/threonine kinase activity | 7.06E-03 |
| 43 | GO:0003756: protein disulfide isomerase activity | 8.00E-03 |
| 44 | GO:0046910: pectinesterase inhibitor activity | 8.01E-03 |
| 45 | GO:0047134: protein-disulfide reductase activity | 8.46E-03 |
| 46 | GO:0004791: thioredoxin-disulfide reductase activity | 9.91E-03 |
| 47 | GO:0004672: protein kinase activity | 1.02E-02 |
| 48 | GO:0005515: protein binding | 1.02E-02 |
| 49 | GO:0019901: protein kinase binding | 1.04E-02 |
| 50 | GO:0048038: quinone binding | 1.09E-02 |
| 51 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.20E-02 |
| 52 | GO:0051015: actin filament binding | 1.20E-02 |
| 53 | GO:0016168: chlorophyll binding | 1.47E-02 |
| 54 | GO:0046872: metal ion binding | 1.50E-02 |
| 55 | GO:0008233: peptidase activity | 1.63E-02 |
| 56 | GO:0005096: GTPase activator activity | 1.77E-02 |
| 57 | GO:0003993: acid phosphatase activity | 2.09E-02 |
| 58 | GO:0050661: NADP binding | 2.22E-02 |
| 59 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.56E-02 |
| 60 | GO:0016298: lipase activity | 3.07E-02 |
| 61 | GO:0003777: microtubule motor activity | 3.22E-02 |
| 62 | GO:0015171: amino acid transmembrane transporter activity | 3.22E-02 |
| 63 | GO:0005524: ATP binding | 3.22E-02 |
| 64 | GO:0045330: aspartyl esterase activity | 3.22E-02 |
| 65 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.61E-02 |
| 66 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.61E-02 |
| 67 | GO:0030599: pectinesterase activity | 3.69E-02 |
| 68 | GO:0003779: actin binding | 3.77E-02 |
| 69 | GO:0016887: ATPase activity | 3.78E-02 |
| 70 | GO:0015035: protein disulfide oxidoreductase activity | 3.93E-02 |
| 71 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.60E-02 |
| 72 | GO:0016829: lyase activity | 4.77E-02 |
| 73 | GO:0004252: serine-type endopeptidase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 3.47E-09 |
| 3 | GO:0009507: chloroplast | 3.58E-09 |
| 4 | GO:0009570: chloroplast stroma | 6.35E-07 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.66E-06 |
| 6 | GO:0009941: chloroplast envelope | 5.92E-06 |
| 7 | GO:0009706: chloroplast inner membrane | 5.85E-05 |
| 8 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.57E-04 |
| 9 | GO:0042651: thylakoid membrane | 4.03E-04 |
| 10 | GO:0010007: magnesium chelatase complex | 4.25E-04 |
| 11 | GO:0031969: chloroplast membrane | 4.56E-04 |
| 12 | GO:0032432: actin filament bundle | 6.10E-04 |
| 13 | GO:0009531: secondary cell wall | 6.10E-04 |
| 14 | GO:0010287: plastoglobule | 7.74E-04 |
| 15 | GO:0009517: PSII associated light-harvesting complex II | 8.10E-04 |
| 16 | GO:0030660: Golgi-associated vesicle membrane | 8.10E-04 |
| 17 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 8.10E-04 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 8.28E-04 |
| 19 | GO:0009538: photosystem I reaction center | 2.03E-03 |
| 20 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.03E-03 |
| 21 | GO:0031977: thylakoid lumen | 2.41E-03 |
| 22 | GO:0009579: thylakoid | 2.56E-03 |
| 23 | GO:0005765: lysosomal membrane | 3.59E-03 |
| 24 | GO:0005884: actin filament | 3.59E-03 |
| 25 | GO:0016602: CCAAT-binding factor complex | 4.30E-03 |
| 26 | GO:0030095: chloroplast photosystem II | 4.66E-03 |
| 27 | GO:0030076: light-harvesting complex | 5.04E-03 |
| 28 | GO:0005623: cell | 6.40E-03 |
| 29 | GO:0005871: kinesin complex | 8.46E-03 |
| 30 | GO:0009522: photosystem I | 9.91E-03 |
| 31 | GO:0009523: photosystem II | 1.04E-02 |
| 32 | GO:0071944: cell periphery | 1.20E-02 |
| 33 | GO:0010008: endosome membrane | 3.45E-02 |