Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G16940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process1.13E-05
2GO:0034214: protein hexamerization1.13E-05
3GO:0010482: regulation of epidermal cell division1.13E-05
4GO:0003400: regulation of COPII vesicle coating1.13E-05
5GO:0009306: protein secretion2.46E-05
6GO:0015824: proline transport3.00E-05
7GO:1904961: quiescent center organization3.00E-05
8GO:0048767: root hair elongation9.26E-05
9GO:0051567: histone H3-K9 methylation1.14E-04
10GO:0006656: phosphatidylcholine biosynthetic process1.49E-04
11GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.86E-04
12GO:0070814: hydrogen sulfide biosynthetic process1.86E-04
13GO:0010449: root meristem growth4.44E-04
14GO:0000103: sulfate assimilation4.91E-04
15GO:0006896: Golgi to vacuole transport4.91E-04
16GO:0019538: protein metabolic process4.91E-04
17GO:0048765: root hair cell differentiation5.39E-04
18GO:0000266: mitochondrial fission5.89E-04
19GO:0010026: trichome differentiation9.08E-04
20GO:0009695: jasmonic acid biosynthetic process9.08E-04
21GO:0031408: oxylipin biosynthetic process9.65E-04
22GO:0030433: ubiquitin-dependent ERAD pathway1.02E-03
23GO:0006730: one-carbon metabolic process1.02E-03
24GO:0030163: protein catabolic process1.66E-03
25GO:0006904: vesicle docking involved in exocytosis1.80E-03
26GO:0000910: cytokinesis1.87E-03
27GO:0009816: defense response to bacterium, incompatible interaction2.02E-03
28GO:0006888: ER to Golgi vesicle-mediated transport2.17E-03
29GO:0006865: amino acid transport2.64E-03
30GO:0006631: fatty acid metabolic process3.06E-03
31GO:0006511: ubiquitin-dependent protein catabolic process3.22E-03
32GO:0006417: regulation of translation4.24E-03
33GO:0015031: protein transport6.06E-03
34GO:0009058: biosynthetic process6.09E-03
35GO:0016036: cellular response to phosphate starvation6.99E-03
36GO:0006470: protein dephosphorylation8.05E-03
37GO:0007049: cell cycle1.08E-02
38GO:0016042: lipid catabolic process1.50E-02
39GO:0048364: root development1.57E-02
40GO:0051301: cell division2.44E-02
41GO:0042742: defense response to bacterium3.80E-02
RankGO TermAdjusted P value
1GO:0004105: choline-phosphate cytidylyltransferase activity1.13E-05
2GO:0005090: Sar guanyl-nucleotide exchange factor activity1.13E-05
3GO:0004321: fatty-acyl-CoA synthase activity1.13E-05
4GO:0004326: tetrahydrofolylpolyglutamate synthase activity3.00E-05
5GO:0015193: L-proline transmembrane transporter activity5.40E-05
6GO:0004781: sulfate adenylyltransferase (ATP) activity5.40E-05
7GO:0004180: carboxypeptidase activity5.40E-05
8GO:0003995: acyl-CoA dehydrogenase activity1.14E-04
9GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.49E-04
10GO:0036402: proteasome-activating ATPase activity1.86E-04
11GO:0051020: GTPase binding2.25E-04
12GO:0004630: phospholipase D activity3.52E-04
13GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity3.52E-04
14GO:0016207: 4-coumarate-CoA ligase activity3.97E-04
15GO:0017025: TBP-class protein binding7.45E-04
16GO:0004722: protein serine/threonine phosphatase activity1.22E-03
17GO:0003924: GTPase activity1.36E-03
18GO:0016887: ATPase activity2.09E-03
19GO:0008236: serine-type peptidase activity2.25E-03
20GO:0005096: GTPase activator activity2.40E-03
21GO:0003993: acid phosphatase activity2.80E-03
22GO:0005525: GTP binding3.89E-03
23GO:0015171: amino acid transmembrane transporter activity4.24E-03
24GO:0016874: ligase activity4.83E-03
25GO:0008565: protein transporter activity6.64E-03
26GO:0008017: microtubule binding7.57E-03
27GO:0050660: flavin adenine dinucleotide binding1.10E-02
28GO:0042803: protein homodimerization activity1.36E-02
29GO:0005524: ATP binding1.60E-02
30GO:0008289: lipid binding1.93E-02
31GO:0000166: nucleotide binding2.29E-02
32GO:0016491: oxidoreductase activity4.62E-02
33GO:0004672: protein kinase activity4.99E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex2.06E-04
2GO:0031597: cytosolic proteasome complex2.25E-04
3GO:0031595: nuclear proteasome complex2.66E-04
4GO:0009524: phragmoplast3.90E-04
5GO:0005774: vacuolar membrane4.18E-04
6GO:0008540: proteasome regulatory particle, base subcomplex4.44E-04
7GO:0008541: proteasome regulatory particle, lid subcomplex5.39E-04
8GO:0005829: cytosol6.07E-04
9GO:0030176: integral component of endoplasmic reticulum membrane7.45E-04
10GO:0030136: clathrin-coated vesicle1.20E-03
11GO:0019898: extrinsic component of membrane1.46E-03
12GO:0005886: plasma membrane2.08E-03
13GO:0005777: peroxisome2.73E-03
14GO:0031902: late endosome membrane3.06E-03
15GO:0005856: cytoskeleton3.50E-03
16GO:0009570: chloroplast stroma6.06E-03
17GO:0016020: membrane7.34E-03
18GO:0005874: microtubule1.13E-02
19GO:0009506: plasmodesma1.48E-02
20GO:0005794: Golgi apparatus2.17E-02
21GO:0005773: vacuole2.55E-02
22GO:0009505: plant-type cell wall4.46E-02
23GO:0000139: Golgi membrane4.71E-02
Gene type



Gene DE type