co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G16570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:0005996: monosaccharide metabolic process	0.00E+00
4	GO:0090393: sepal giant cell development	0.00E+00
5	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
6	GO:0006546: glycine catabolic process	1.47E-07
7	GO:0019464: glycine decarboxylation via glycine cleavage system	2.94E-05
8	GO:0006633: fatty acid biosynthetic process	6.61E-05
9	GO:0071555: cell wall organization	9.47E-05
10	GO:0042335: cuticle development	1.17E-04
11	GO:0045489: pectin biosynthetic process	1.30E-04
12	GO:0006723: cuticle hydrocarbon biosynthetic process	2.00E-04
13	GO:0006659: phosphatidylserine biosynthetic process	2.00E-04
14	GO:0000066: mitochondrial ornithine transport	2.00E-04
15	GO:1901349: glucosinolate transport	2.00E-04
16	GO:0090449: phloem glucosinolate loading	2.00E-04
17	GO:0071370: cellular response to gibberellin stimulus	2.00E-04
18	GO:0000038: very long-chain fatty acid metabolic process	4.04E-04
19	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.48E-04
20	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.48E-04
21	GO:0060919: auxin influx	4.48E-04
22	GO:0015786: UDP-glucose transport	4.48E-04
23	GO:0007154: cell communication	4.48E-04
24	GO:0016051: carbohydrate biosynthetic process	5.66E-04
25	GO:0005977: glycogen metabolic process	7.29E-04
26	GO:0015783: GDP-fucose transport	7.29E-04
27	GO:0006011: UDP-glucose metabolic process	7.29E-04
28	GO:0006000: fructose metabolic process	7.29E-04
29	GO:0043447: alkane biosynthetic process	7.29E-04
30	GO:0009833: plant-type primary cell wall biogenesis	7.36E-04
31	GO:0006833: water transport	7.36E-04
32	GO:0042546: cell wall biogenesis	8.18E-04
33	GO:0032877: positive regulation of DNA endoreduplication	1.04E-03
34	GO:0006166: purine ribonucleoside salvage	1.04E-03
35	GO:0006241: CTP biosynthetic process	1.04E-03
36	GO:0072334: UDP-galactose transmembrane transport	1.04E-03
37	GO:0051016: barbed-end actin filament capping	1.04E-03
38	GO:0006165: nucleoside diphosphate phosphorylation	1.04E-03
39	GO:0006228: UTP biosynthetic process	1.04E-03
40	GO:0006168: adenine salvage	1.04E-03
41	GO:0005975: carbohydrate metabolic process	1.08E-03
42	GO:0010037: response to carbon dioxide	1.38E-03
43	GO:0015976: carbon utilization	1.38E-03
44	GO:0009765: photosynthesis, light harvesting	1.38E-03
45	GO:0006183: GTP biosynthetic process	1.38E-03
46	GO:0045727: positive regulation of translation	1.38E-03
47	GO:2000122: negative regulation of stomatal complex development	1.38E-03
48	GO:0006749: glutathione metabolic process	1.38E-03
49	GO:0031122: cytoplasmic microtubule organization	1.38E-03
50	GO:0006021: inositol biosynthetic process	1.38E-03
51	GO:0034220: ion transmembrane transport	1.47E-03
52	GO:0000271: polysaccharide biosynthetic process	1.47E-03
53	GO:0042545: cell wall modification	1.69E-03
54	GO:0044209: AMP salvage	1.76E-03
55	GO:0032876: negative regulation of DNA endoreduplication	1.76E-03
56	GO:0046785: microtubule polymerization	1.76E-03
57	GO:0071554: cell wall organization or biogenesis	1.95E-03
58	GO:0007264: small GTPase mediated signal transduction	2.08E-03
59	GO:0010583: response to cyclopentenone	2.08E-03
60	GO:0010942: positive regulation of cell death	2.17E-03
61	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.17E-03
62	GO:0000741: karyogamy	2.17E-03
63	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.60E-03
64	GO:0017148: negative regulation of translation	2.60E-03
65	GO:0010411: xyloglucan metabolic process	3.29E-03
66	GO:0006810: transport	3.43E-03
67	GO:0045490: pectin catabolic process	3.50E-03
68	GO:0045010: actin nucleation	3.55E-03
69	GO:0052543: callose deposition in cell wall	3.55E-03
70	GO:0007155: cell adhesion	3.55E-03
71	GO:0048564: photosystem I assembly	3.55E-03
72	GO:0008610: lipid biosynthetic process	3.55E-03
73	GO:0006402: mRNA catabolic process	3.55E-03
74	GO:0009850: auxin metabolic process	3.55E-03
75	GO:0032544: plastid translation	4.06E-03
76	GO:0007389: pattern specification process	4.06E-03
77	GO:0006002: fructose 6-phosphate metabolic process	4.06E-03
78	GO:0010119: regulation of stomatal movement	4.21E-03
79	GO:0006754: ATP biosynthetic process	4.60E-03
80	GO:0009056: catabolic process	4.60E-03
81	GO:0000902: cell morphogenesis	4.60E-03
82	GO:0043069: negative regulation of programmed cell death	5.74E-03
83	GO:0048829: root cap development	5.74E-03
84	GO:0010192: mucilage biosynthetic process	5.74E-03
85	GO:0019538: protein metabolic process	5.74E-03
86	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.74E-03
87	GO:0000272: polysaccharide catabolic process	6.34E-03
88	GO:0018119: peptidyl-cysteine S-nitrosylation	6.34E-03
89	GO:0009773: photosynthetic electron transport in photosystem I	6.34E-03
90	GO:1903507: negative regulation of nucleic acid-templated transcription	6.34E-03
91	GO:2000028: regulation of photoperiodism, flowering	7.61E-03
92	GO:0030036: actin cytoskeleton organization	7.61E-03
93	GO:0050826: response to freezing	7.61E-03
94	GO:0009725: response to hormone	7.61E-03
95	GO:0006094: gluconeogenesis	7.61E-03
96	GO:0009767: photosynthetic electron transport chain	7.61E-03
97	GO:0005986: sucrose biosynthetic process	7.61E-03
98	GO:0080167: response to karrikin	8.02E-03
99	GO:0019253: reductive pentose-phosphate cycle	8.28E-03
100	GO:0051603: proteolysis involved in cellular protein catabolic process	8.29E-03
101	GO:0009825: multidimensional cell growth	8.97E-03
102	GO:0005985: sucrose metabolic process	8.97E-03
103	GO:0010025: wax biosynthetic process	9.68E-03
104	GO:0006636: unsaturated fatty acid biosynthetic process	9.68E-03
105	GO:0007017: microtubule-based process	1.12E-02
106	GO:0009768: photosynthesis, light harvesting in photosystem I	1.12E-02
107	GO:0003333: amino acid transmembrane transport	1.19E-02
108	GO:0016226: iron-sulfur cluster assembly	1.27E-02
109	GO:0006730: one-carbon metabolic process	1.27E-02
110	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.27E-02
111	GO:0009294: DNA mediated transformation	1.35E-02
112	GO:0019722: calcium-mediated signaling	1.43E-02
113	GO:0010051: xylem and phloem pattern formation	1.60E-02
114	GO:0042631: cellular response to water deprivation	1.60E-02
115	GO:0000226: microtubule cytoskeleton organization	1.60E-02
116	GO:0080022: primary root development	1.60E-02
117	GO:0010197: polar nucleus fusion	1.69E-02
118	GO:0007059: chromosome segregation	1.78E-02
119	GO:0019252: starch biosynthetic process	1.87E-02
120	GO:0008654: phospholipid biosynthetic process	1.87E-02
121	GO:0009791: post-embryonic development	1.87E-02
122	GO:0002229: defense response to oomycetes	1.97E-02
123	GO:0007623: circadian rhythm	1.98E-02
124	GO:0048235: pollen sperm cell differentiation	2.06E-02
125	GO:1901657: glycosyl compound metabolic process	2.16E-02
126	GO:0010090: trichome morphogenesis	2.16E-02
127	GO:0007166: cell surface receptor signaling pathway	2.27E-02
128	GO:0007267: cell-cell signaling	2.35E-02
129	GO:0009617: response to bacterium	2.37E-02
130	GO:0051607: defense response to virus	2.45E-02
131	GO:0016126: sterol biosynthetic process	2.55E-02
132	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.66E-02
133	GO:0009416: response to light stimulus	2.71E-02
134	GO:0009658: chloroplast organization	3.07E-02
135	GO:0018298: protein-chromophore linkage	3.09E-02
136	GO:0030244: cellulose biosynthetic process	3.09E-02
137	GO:0009409: response to cold	3.13E-02
138	GO:0010311: lateral root formation	3.20E-02
139	GO:0009832: plant-type cell wall biogenesis	3.20E-02
140	GO:0010218: response to far red light	3.31E-02
141	GO:0009407: toxin catabolic process	3.31E-02
142	GO:0007049: cell cycle	3.42E-02
143	GO:0006865: amino acid transport	3.54E-02
144	GO:0009637: response to blue light	3.65E-02
145	GO:0009853: photorespiration	3.65E-02
146	GO:0009867: jasmonic acid mediated signaling pathway	3.65E-02
147	GO:0055085: transmembrane transport	3.65E-02
148	GO:0006839: mitochondrial transport	4.01E-02
149	GO:0006631: fatty acid metabolic process	4.13E-02
150	GO:0010114: response to red light	4.37E-02
151	GO:0009926: auxin polar transport	4.37E-02
152	GO:0009744: response to sucrose	4.37E-02
153	GO:0009636: response to toxic substance	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
2	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
3	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
4	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.60E-05
5	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.83E-05
6	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.83E-05
7	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.83E-05
8	GO:0090448: glucosinolate:proton symporter activity	2.00E-04
9	GO:0030797: 24-methylenesterol C-methyltransferase activity	2.00E-04
10	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.00E-04
11	GO:0008252: nucleotidase activity	2.00E-04
12	GO:0080132: fatty acid alpha-hydroxylase activity	2.00E-04
13	GO:0010313: phytochrome binding	2.00E-04
14	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	2.00E-04
15	GO:0008568: microtubule-severing ATPase activity	2.00E-04
16	GO:0042389: omega-3 fatty acid desaturase activity	4.48E-04
17	GO:0010297: heteropolysaccharide binding	4.48E-04
18	GO:0004047: aminomethyltransferase activity	4.48E-04
19	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.48E-04
20	GO:0000064: L-ornithine transmembrane transporter activity	4.48E-04
21	GO:0004512: inositol-3-phosphate synthase activity	4.48E-04
22	GO:0048531: beta-1,3-galactosyltransferase activity	4.48E-04
23	GO:0008967: phosphoglycolate phosphatase activity	4.48E-04
24	GO:0004089: carbonate dehydratase activity	5.25E-04
25	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.91E-04
26	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	7.29E-04
27	GO:0005457: GDP-fucose transmembrane transporter activity	7.29E-04
28	GO:0032947: protein complex scaffold	7.29E-04
29	GO:0004550: nucleoside diphosphate kinase activity	1.04E-03
30	GO:0048027: mRNA 5'-UTR binding	1.04E-03
31	GO:0003999: adenine phosphoribosyltransferase activity	1.04E-03
32	GO:0005460: UDP-glucose transmembrane transporter activity	1.04E-03
33	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.07E-03
34	GO:0045330: aspartyl esterase activity	1.28E-03
35	GO:0008453: alanine-glyoxylate transaminase activity	1.38E-03
36	GO:0010328: auxin influx transmembrane transporter activity	1.38E-03
37	GO:0030599: pectinesterase activity	1.62E-03
38	GO:0005459: UDP-galactose transmembrane transporter activity	1.76E-03
39	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.95E-03
40	GO:0016757: transferase activity, transferring glycosyl groups	2.15E-03
41	GO:0042578: phosphoric ester hydrolase activity	2.17E-03
42	GO:0004556: alpha-amylase activity	2.17E-03
43	GO:0016758: transferase activity, transferring hexosyl groups	2.25E-03
44	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.60E-03
45	GO:0051753: mannan synthase activity	2.60E-03
46	GO:0016413: O-acetyltransferase activity	2.65E-03
47	GO:0015250: water channel activity	2.80E-03
48	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.29E-03
49	GO:0004564: beta-fructofuranosidase activity	3.55E-03
50	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.06E-03
51	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.60E-03
52	GO:0004575: sucrose alpha-glucosidase activity	5.15E-03
53	GO:0004185: serine-type carboxypeptidase activity	5.94E-03
54	GO:0004860: protein kinase inhibitor activity	6.34E-03
55	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.28E-03
56	GO:0031409: pigment binding	9.68E-03
57	GO:0051536: iron-sulfur cluster binding	1.04E-02
58	GO:0004857: enzyme inhibitor activity	1.04E-02
59	GO:0003714: transcription corepressor activity	1.04E-02
60	GO:0022857: transmembrane transporter activity	1.08E-02
61	GO:0051087: chaperone binding	1.12E-02
62	GO:0016760: cellulose synthase (UDP-forming) activity	1.35E-02
63	GO:0008080: N-acetyltransferase activity	1.69E-02
64	GO:0050662: coenzyme binding	1.78E-02
65	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.85E-02
66	GO:0019901: protein kinase binding	1.87E-02
67	GO:0004872: receptor activity	1.87E-02
68	GO:0004518: nuclease activity	2.06E-02
69	GO:0051015: actin filament binding	2.16E-02
70	GO:0016759: cellulose synthase activity	2.25E-02
71	GO:0003824: catalytic activity	2.30E-02
72	GO:0005200: structural constituent of cytoskeleton	2.35E-02
73	GO:0008483: transaminase activity	2.35E-02
74	GO:0016168: chlorophyll binding	2.66E-02
75	GO:0102483: scopolin beta-glucosidase activity	2.87E-02
76	GO:0030247: polysaccharide binding	2.87E-02
77	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.98E-02
78	GO:0046982: protein heterodimerization activity	3.01E-02
79	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.31E-02
80	GO:0003993: acid phosphatase activity	3.77E-02
81	GO:0008422: beta-glucosidase activity	3.89E-02
82	GO:0052689: carboxylic ester hydrolase activity	4.19E-02
83	GO:0004364: glutathione transferase activity	4.25E-02
84	GO:0015293: symporter activity	4.75E-02
85	GO:0005198: structural molecule activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	2.61E-06
2	GO:0009505: plant-type cell wall	5.39E-06
3	GO:0005960: glycine cleavage complex	1.60E-05
4	GO:0016021: integral component of membrane	1.70E-04
5	GO:0009344: nitrite reductase complex [NAD(P)H]	2.00E-04
6	GO:0000139: Golgi membrane	2.24E-04
7	GO:0048046: apoplast	2.74E-04
8	GO:0000427: plastid-encoded plastid RNA polymerase complex	4.48E-04
9	GO:0042170: plastid membrane	4.48E-04
10	GO:0005886: plasma membrane	9.09E-04
11	GO:0031225: anchored component of membrane	9.61E-04
12	GO:0005775: vacuolar lumen	1.04E-03
13	GO:0009543: chloroplast thylakoid lumen	2.33E-03
14	GO:0009534: chloroplast thylakoid	2.34E-03
15	GO:0005618: cell wall	3.10E-03
16	GO:0005576: extracellular region	3.47E-03
17	GO:0009570: chloroplast stroma	3.91E-03
18	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.60E-03
19	GO:0045298: tubulin complex	4.60E-03
20	GO:0046658: anchored component of plasma membrane	5.00E-03
21	GO:0031902: late endosome membrane	5.48E-03
22	GO:0055028: cortical microtubule	5.74E-03
23	GO:0005765: lysosomal membrane	6.34E-03
24	GO:0048471: perinuclear region of cytoplasm	6.34E-03
25	GO:0019013: viral nucleocapsid	7.61E-03
26	GO:0009507: chloroplast	8.17E-03
27	GO:0030095: chloroplast photosystem II	8.28E-03
28	GO:0030076: light-harvesting complex	8.97E-03
29	GO:0005758: mitochondrial intermembrane space	1.04E-02
30	GO:0009654: photosystem II oxygen evolving complex	1.12E-02
31	GO:0009941: chloroplast envelope	1.25E-02
32	GO:0010287: plastoglobule	1.36E-02
33	GO:0016020: membrane	1.60E-02
34	GO:0009522: photosystem I	1.78E-02
35	GO:0009523: photosystem II	1.87E-02
36	GO:0019898: extrinsic component of membrane	1.87E-02
37	GO:0009506: plasmodesma	2.22E-02
38	GO:0010319: stromule	2.35E-02
39	GO:0030529: intracellular ribonucleoprotein complex	2.55E-02
40	GO:0000325: plant-type vacuole	3.42E-02
41	GO:0000786: nucleosome	3.54E-02
42	GO:0005789: endoplasmic reticulum membrane	3.73E-02
43	GO:0005819: spindle	3.89E-02
44	GO:0005802: trans-Golgi network	4.85E-02