GO Enrichment Analysis of Co-expressed Genes with
AT3G15730
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000390: spliceosomal complex disassembly | 0.00E+00 |
| 2 | GO:0019484: beta-alanine catabolic process | 0.00E+00 |
| 3 | GO:0016236: macroautophagy | 0.00E+00 |
| 4 | GO:0009448: gamma-aminobutyric acid metabolic process | 0.00E+00 |
| 5 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 6 | GO:0098755: maintenance of seed dormancy by absisic acid | 0.00E+00 |
| 7 | GO:0045053: protein retention in Golgi apparatus | 0.00E+00 |
| 8 | GO:0006105: succinate metabolic process | 0.00E+00 |
| 9 | GO:0009865: pollen tube adhesion | 6.91E-05 |
| 10 | GO:0006540: glutamate decarboxylation to succinate | 6.91E-05 |
| 11 | GO:0010265: SCF complex assembly | 6.91E-05 |
| 12 | GO:0098721: uracil import across plasma membrane | 6.91E-05 |
| 13 | GO:0098702: adenine import across plasma membrane | 6.91E-05 |
| 14 | GO:0035266: meristem growth | 6.91E-05 |
| 15 | GO:0098710: guanine import across plasma membrane | 6.91E-05 |
| 16 | GO:0009450: gamma-aminobutyric acid catabolic process | 6.91E-05 |
| 17 | GO:0007292: female gamete generation | 6.91E-05 |
| 18 | GO:0030242: pexophagy | 6.91E-05 |
| 19 | GO:0010184: cytokinin transport | 6.91E-05 |
| 20 | GO:0035344: hypoxanthine transport | 6.91E-05 |
| 21 | GO:0009933: meristem structural organization | 1.36E-04 |
| 22 | GO:0042325: regulation of phosphorylation | 1.66E-04 |
| 23 | GO:0042550: photosystem I stabilization | 1.66E-04 |
| 24 | GO:0010033: response to organic substance | 1.66E-04 |
| 25 | GO:0051788: response to misfolded protein | 1.66E-04 |
| 26 | GO:0051258: protein polymerization | 1.66E-04 |
| 27 | GO:0009727: detection of ethylene stimulus | 1.66E-04 |
| 28 | GO:0048367: shoot system development | 2.29E-04 |
| 29 | GO:1900055: regulation of leaf senescence | 2.81E-04 |
| 30 | GO:1900140: regulation of seedling development | 2.81E-04 |
| 31 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 2.81E-04 |
| 32 | GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway | 2.81E-04 |
| 33 | GO:0060968: regulation of gene silencing | 2.81E-04 |
| 34 | GO:0071786: endoplasmic reticulum tubular network organization | 4.06E-04 |
| 35 | GO:0006882: cellular zinc ion homeostasis | 4.06E-04 |
| 36 | GO:0048194: Golgi vesicle budding | 4.06E-04 |
| 37 | GO:0006020: inositol metabolic process | 4.06E-04 |
| 38 | GO:2001289: lipid X metabolic process | 4.06E-04 |
| 39 | GO:0042752: regulation of circadian rhythm | 4.23E-04 |
| 40 | GO:0006623: protein targeting to vacuole | 4.53E-04 |
| 41 | GO:0006635: fatty acid beta-oxidation | 4.85E-04 |
| 42 | GO:0045324: late endosome to vacuole transport | 5.42E-04 |
| 43 | GO:0006878: cellular copper ion homeostasis | 5.42E-04 |
| 44 | GO:0033320: UDP-D-xylose biosynthetic process | 5.42E-04 |
| 45 | GO:0006536: glutamate metabolic process | 5.42E-04 |
| 46 | GO:0006914: autophagy | 5.83E-04 |
| 47 | GO:0006014: D-ribose metabolic process | 8.40E-04 |
| 48 | GO:0050665: hydrogen peroxide biosynthetic process | 8.40E-04 |
| 49 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 8.40E-04 |
| 50 | GO:0048827: phyllome development | 8.40E-04 |
| 51 | GO:0048232: male gamete generation | 8.40E-04 |
| 52 | GO:0043248: proteasome assembly | 8.40E-04 |
| 53 | GO:0042732: D-xylose metabolic process | 8.40E-04 |
| 54 | GO:0046686: response to cadmium ion | 9.62E-04 |
| 55 | GO:0006811: ion transport | 9.79E-04 |
| 56 | GO:0006499: N-terminal protein myristoylation | 9.79E-04 |
| 57 | GO:0010016: shoot system morphogenesis | 9.99E-04 |
| 58 | GO:0048280: vesicle fusion with Golgi apparatus | 9.99E-04 |
| 59 | GO:0009867: jasmonic acid mediated signaling pathway | 1.12E-03 |
| 60 | GO:0016051: carbohydrate biosynthetic process | 1.12E-03 |
| 61 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.17E-03 |
| 62 | GO:0009690: cytokinin metabolic process | 1.34E-03 |
| 63 | GO:0006605: protein targeting | 1.34E-03 |
| 64 | GO:0019375: galactolipid biosynthetic process | 1.34E-03 |
| 65 | GO:0010078: maintenance of root meristem identity | 1.34E-03 |
| 66 | GO:0009819: drought recovery | 1.34E-03 |
| 67 | GO:0006526: arginine biosynthetic process | 1.53E-03 |
| 68 | GO:0006972: hyperosmotic response | 1.53E-03 |
| 69 | GO:0006002: fructose 6-phosphate metabolic process | 1.53E-03 |
| 70 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.73E-03 |
| 71 | GO:0048507: meristem development | 1.73E-03 |
| 72 | GO:0009809: lignin biosynthetic process | 1.90E-03 |
| 73 | GO:0009793: embryo development ending in seed dormancy | 1.92E-03 |
| 74 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.93E-03 |
| 75 | GO:0048829: root cap development | 2.14E-03 |
| 76 | GO:0006896: Golgi to vacuole transport | 2.14E-03 |
| 77 | GO:0048364: root development | 2.19E-03 |
| 78 | GO:0006979: response to oxidative stress | 2.22E-03 |
| 79 | GO:0006096: glycolytic process | 2.24E-03 |
| 80 | GO:0010015: root morphogenesis | 2.36E-03 |
| 81 | GO:0052544: defense response by callose deposition in cell wall | 2.36E-03 |
| 82 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 2.58E-03 |
| 83 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 2.58E-03 |
| 84 | GO:0006006: glucose metabolic process | 2.82E-03 |
| 85 | GO:0006541: glutamine metabolic process | 3.06E-03 |
| 86 | GO:0002237: response to molecule of bacterial origin | 3.06E-03 |
| 87 | GO:0090351: seedling development | 3.30E-03 |
| 88 | GO:0009225: nucleotide-sugar metabolic process | 3.30E-03 |
| 89 | GO:0007030: Golgi organization | 3.30E-03 |
| 90 | GO:0005985: sucrose metabolic process | 3.30E-03 |
| 91 | GO:0006863: purine nucleobase transport | 3.56E-03 |
| 92 | GO:0034976: response to endoplasmic reticulum stress | 3.56E-03 |
| 93 | GO:0009651: response to salt stress | 3.68E-03 |
| 94 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.81E-03 |
| 95 | GO:0031408: oxylipin biosynthetic process | 4.35E-03 |
| 96 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.63E-03 |
| 97 | GO:0001944: vasculature development | 4.91E-03 |
| 98 | GO:0009625: response to insect | 4.91E-03 |
| 99 | GO:0006012: galactose metabolic process | 4.91E-03 |
| 100 | GO:0042147: retrograde transport, endosome to Golgi | 5.50E-03 |
| 101 | GO:0010087: phloem or xylem histogenesis | 5.80E-03 |
| 102 | GO:0010182: sugar mediated signaling pathway | 6.11E-03 |
| 103 | GO:0010154: fruit development | 6.11E-03 |
| 104 | GO:0019252: starch biosynthetic process | 6.74E-03 |
| 105 | GO:0010183: pollen tube guidance | 6.74E-03 |
| 106 | GO:0006891: intra-Golgi vesicle-mediated transport | 7.07E-03 |
| 107 | GO:0009630: gravitropism | 7.40E-03 |
| 108 | GO:0071281: cellular response to iron ion | 7.73E-03 |
| 109 | GO:0006904: vesicle docking involved in exocytosis | 8.42E-03 |
| 110 | GO:0051607: defense response to virus | 8.77E-03 |
| 111 | GO:0016192: vesicle-mediated transport | 9.31E-03 |
| 112 | GO:0010029: regulation of seed germination | 9.50E-03 |
| 113 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.02E-02 |
| 114 | GO:0045454: cell redox homeostasis | 1.06E-02 |
| 115 | GO:0016049: cell growth | 1.06E-02 |
| 116 | GO:0010311: lateral root formation | 1.14E-02 |
| 117 | GO:0010119: regulation of stomatal movement | 1.22E-02 |
| 118 | GO:0045087: innate immune response | 1.30E-02 |
| 119 | GO:0009408: response to heat | 1.31E-02 |
| 120 | GO:0006099: tricarboxylic acid cycle | 1.34E-02 |
| 121 | GO:0006887: exocytosis | 1.47E-02 |
| 122 | GO:0006468: protein phosphorylation | 1.57E-02 |
| 123 | GO:0009873: ethylene-activated signaling pathway | 1.69E-02 |
| 124 | GO:0009965: leaf morphogenesis | 1.69E-02 |
| 125 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.78E-02 |
| 126 | GO:0009846: pollen germination | 1.83E-02 |
| 127 | GO:0009626: plant-type hypersensitive response | 2.27E-02 |
| 128 | GO:0018105: peptidyl-serine phosphorylation | 2.52E-02 |
| 129 | GO:0006396: RNA processing | 2.52E-02 |
| 130 | GO:0000398: mRNA splicing, via spliceosome | 2.74E-02 |
| 131 | GO:0009845: seed germination | 3.07E-02 |
| 132 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.16E-02 |
| 133 | GO:0006633: fatty acid biosynthetic process | 3.41E-02 |
| 134 | GO:0010150: leaf senescence | 3.65E-02 |
| 135 | GO:0009739: response to gibberellin | 3.95E-02 |
| 136 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.95E-02 |
| 137 | GO:0016567: protein ubiquitination | 4.23E-02 |
| 138 | GO:0042742: defense response to bacterium | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016508: long-chain-enoyl-CoA hydratase activity | 0.00E+00 |
| 2 | GO:0034387: 4-aminobutyrate:pyruvate transaminase activity | 0.00E+00 |
| 3 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 4 | GO:0015211: purine nucleoside transmembrane transporter activity | 0.00E+00 |
| 5 | GO:1990446: U1 snRNP binding | 0.00E+00 |
| 6 | GO:0005548: phospholipid transporter activity | 0.00E+00 |
| 7 | GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity | 0.00E+00 |
| 8 | GO:0004012: phospholipid-translocating ATPase activity | 1.76E-05 |
| 9 | GO:0015207: adenine transmembrane transporter activity | 6.91E-05 |
| 10 | GO:0019707: protein-cysteine S-acyltransferase activity | 6.91E-05 |
| 11 | GO:0046481: digalactosyldiacylglycerol synthase activity | 6.91E-05 |
| 12 | GO:0046480: galactolipid galactosyltransferase activity | 6.91E-05 |
| 13 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 6.91E-05 |
| 14 | GO:0015208: guanine transmembrane transporter activity | 6.91E-05 |
| 15 | GO:0015294: solute:cation symporter activity | 6.91E-05 |
| 16 | GO:0003867: 4-aminobutyrate transaminase activity | 6.91E-05 |
| 17 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.19E-04 |
| 18 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 1.66E-04 |
| 19 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 1.66E-04 |
| 20 | GO:0038199: ethylene receptor activity | 1.66E-04 |
| 21 | GO:0005047: signal recognition particle binding | 2.81E-04 |
| 22 | GO:0035250: UDP-galactosyltransferase activity | 4.06E-04 |
| 23 | GO:0004108: citrate (Si)-synthase activity | 4.06E-04 |
| 24 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 4.06E-04 |
| 25 | GO:0051740: ethylene binding | 4.06E-04 |
| 26 | GO:0004300: enoyl-CoA hydratase activity | 4.06E-04 |
| 27 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 5.42E-04 |
| 28 | GO:0015210: uracil transmembrane transporter activity | 5.42E-04 |
| 29 | GO:0036402: proteasome-activating ATPase activity | 8.40E-04 |
| 30 | GO:0048040: UDP-glucuronate decarboxylase activity | 8.40E-04 |
| 31 | GO:0000287: magnesium ion binding | 9.55E-04 |
| 32 | GO:0070403: NAD+ binding | 9.99E-04 |
| 33 | GO:0004747: ribokinase activity | 9.99E-04 |
| 34 | GO:0003872: 6-phosphofructokinase activity | 1.17E-03 |
| 35 | GO:0008865: fructokinase activity | 1.34E-03 |
| 36 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.34E-03 |
| 37 | GO:0004525: ribonuclease III activity | 1.34E-03 |
| 38 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.34E-03 |
| 39 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 1.73E-03 |
| 40 | GO:0030955: potassium ion binding | 1.93E-03 |
| 41 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.93E-03 |
| 42 | GO:0004743: pyruvate kinase activity | 1.93E-03 |
| 43 | GO:0005524: ATP binding | 2.00E-03 |
| 44 | GO:0004673: protein histidine kinase activity | 2.14E-03 |
| 45 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.58E-03 |
| 46 | GO:0000155: phosphorelay sensor kinase activity | 2.82E-03 |
| 47 | GO:0019888: protein phosphatase regulator activity | 2.82E-03 |
| 48 | GO:0017025: TBP-class protein binding | 3.30E-03 |
| 49 | GO:0004867: serine-type endopeptidase inhibitor activity | 3.30E-03 |
| 50 | GO:0043130: ubiquitin binding | 3.81E-03 |
| 51 | GO:0005345: purine nucleobase transmembrane transporter activity | 4.08E-03 |
| 52 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 4.35E-03 |
| 53 | GO:0003727: single-stranded RNA binding | 5.20E-03 |
| 54 | GO:0003756: protein disulfide isomerase activity | 5.20E-03 |
| 55 | GO:0016853: isomerase activity | 6.42E-03 |
| 56 | GO:0004872: receptor activity | 6.74E-03 |
| 57 | GO:0004674: protein serine/threonine kinase activity | 7.19E-03 |
| 58 | GO:0000156: phosphorelay response regulator activity | 7.73E-03 |
| 59 | GO:0008237: metallopeptidase activity | 8.42E-03 |
| 60 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 9.87E-03 |
| 61 | GO:0004683: calmodulin-dependent protein kinase activity | 1.02E-02 |
| 62 | GO:0005096: GTPase activator activity | 1.14E-02 |
| 63 | GO:0050897: cobalt ion binding | 1.22E-02 |
| 64 | GO:0000149: SNARE binding | 1.38E-02 |
| 65 | GO:0050661: NADP binding | 1.43E-02 |
| 66 | GO:0005484: SNAP receptor activity | 1.56E-02 |
| 67 | GO:0004672: protein kinase activity | 1.71E-02 |
| 68 | GO:0016887: ATPase activity | 2.03E-02 |
| 69 | GO:0008234: cysteine-type peptidase activity | 2.07E-02 |
| 70 | GO:0031625: ubiquitin protein ligase binding | 2.07E-02 |
| 71 | GO:0022857: transmembrane transporter activity | 2.37E-02 |
| 72 | GO:0016758: transferase activity, transferring hexosyl groups | 2.84E-02 |
| 73 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.96E-02 |
| 74 | GO:0030170: pyridoxal phosphate binding | 3.12E-02 |
| 75 | GO:0005516: calmodulin binding | 3.50E-02 |
| 76 | GO:0042802: identical protein binding | 4.32E-02 |
| 77 | GO:0005515: protein binding | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071008: U2-type post-mRNA release spliceosomal complex | 0.00E+00 |
| 2 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 3 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 4 | GO:0031981: nuclear lumen | 0.00E+00 |
| 5 | GO:0005802: trans-Golgi network | 3.79E-05 |
| 6 | GO:0000138: Golgi trans cisterna | 6.91E-05 |
| 7 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 6.91E-05 |
| 8 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 6.91E-05 |
| 9 | GO:0005789: endoplasmic reticulum membrane | 1.87E-04 |
| 10 | GO:0005737: cytoplasm | 1.99E-04 |
| 11 | GO:0005829: cytosol | 2.30E-04 |
| 12 | GO:0005770: late endosome | 3.94E-04 |
| 13 | GO:0000323: lytic vacuole | 4.06E-04 |
| 14 | GO:0071782: endoplasmic reticulum tubular network | 4.06E-04 |
| 15 | GO:0031461: cullin-RING ubiquitin ligase complex | 4.06E-04 |
| 16 | GO:0005776: autophagosome | 5.42E-04 |
| 17 | GO:0005945: 6-phosphofructokinase complex | 6.87E-04 |
| 18 | GO:0030140: trans-Golgi network transport vesicle | 8.40E-04 |
| 19 | GO:0031597: cytosolic proteasome complex | 9.99E-04 |
| 20 | GO:0005794: Golgi apparatus | 1.10E-03 |
| 21 | GO:0000794: condensed nuclear chromosome | 1.17E-03 |
| 22 | GO:0031595: nuclear proteasome complex | 1.17E-03 |
| 23 | GO:0005783: endoplasmic reticulum | 1.18E-03 |
| 24 | GO:0031902: late endosome membrane | 1.32E-03 |
| 25 | GO:0012507: ER to Golgi transport vesicle membrane | 1.34E-03 |
| 26 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.34E-03 |
| 27 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.53E-03 |
| 28 | GO:0009514: glyoxysome | 1.53E-03 |
| 29 | GO:0005768: endosome | 1.87E-03 |
| 30 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.93E-03 |
| 31 | GO:0017119: Golgi transport complex | 2.14E-03 |
| 32 | GO:0005769: early endosome | 3.56E-03 |
| 33 | GO:0031410: cytoplasmic vesicle | 4.63E-03 |
| 34 | GO:0000145: exocyst | 7.40E-03 |
| 35 | GO:0005788: endoplasmic reticulum lumen | 9.50E-03 |
| 36 | GO:0000151: ubiquitin ligase complex | 1.10E-02 |
| 37 | GO:0005643: nuclear pore | 1.10E-02 |
| 38 | GO:0009707: chloroplast outer membrane | 1.10E-02 |
| 39 | GO:0000325: plant-type vacuole | 1.22E-02 |
| 40 | GO:0005819: spindle | 1.38E-02 |
| 41 | GO:0005774: vacuolar membrane | 1.44E-02 |
| 42 | GO:0031201: SNARE complex | 1.47E-02 |
| 43 | GO:0000502: proteasome complex | 1.92E-02 |
| 44 | GO:0010008: endosome membrane | 2.22E-02 |
| 45 | GO:0005777: peroxisome | 2.67E-02 |
| 46 | GO:0005773: vacuole | 2.71E-02 |
| 47 | GO:0005623: cell | 2.96E-02 |
| 48 | GO:0009524: phragmoplast | 3.01E-02 |
| 49 | GO:0005615: extracellular space | 3.95E-02 |