co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
2	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
3	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
4	GO:0045185: maintenance of protein location	0.00E+00
5	GO:0006592: ornithine biosynthetic process	0.00E+00
6	GO:0032780: negative regulation of ATPase activity	0.00E+00
7	GO:0006482: protein demethylation	0.00E+00
8	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
9	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
10	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
11	GO:0010360: negative regulation of anion channel activity	0.00E+00
12	GO:0035269: protein O-linked mannosylation	0.00E+00
13	GO:0006983: ER overload response	0.00E+00
14	GO:1900425: negative regulation of defense response to bacterium	4.99E-05
15	GO:0006144: purine nucleobase metabolic process	1.62E-04
16	GO:0009968: negative regulation of signal transduction	1.62E-04
17	GO:0035266: meristem growth	1.62E-04
18	GO:0007292: female gamete generation	1.62E-04
19	GO:0048482: plant ovule morphogenesis	1.62E-04
20	GO:0019628: urate catabolic process	1.62E-04
21	GO:0043547: positive regulation of GTPase activity	1.62E-04
22	GO:0006481: C-terminal protein methylation	1.62E-04
23	GO:0010184: cytokinin transport	1.62E-04
24	GO:1902361: mitochondrial pyruvate transmembrane transport	1.62E-04
25	GO:0045454: cell redox homeostasis	2.45E-04
26	GO:0043069: negative regulation of programmed cell death	2.60E-04
27	GO:0019441: tryptophan catabolic process to kynurenine	3.69E-04
28	GO:0006672: ceramide metabolic process	3.69E-04
29	GO:0006212: uracil catabolic process	3.69E-04
30	GO:0051788: response to misfolded protein	3.69E-04
31	GO:0052542: defense response by callose deposition	3.69E-04
32	GO:0080026: response to indolebutyric acid	3.69E-04
33	GO:0043066: negative regulation of apoptotic process	3.69E-04
34	GO:0019483: beta-alanine biosynthetic process	3.69E-04
35	GO:0006850: mitochondrial pyruvate transport	3.69E-04
36	GO:0007154: cell communication	3.69E-04
37	GO:0007034: vacuolar transport	4.47E-04
38	GO:0006631: fatty acid metabolic process	4.88E-04
39	GO:0051707: response to other organism	5.41E-04
40	GO:0072661: protein targeting to plasma membrane	6.04E-04
41	GO:0046621: negative regulation of organ growth	6.04E-04
42	GO:0010476: gibberellin mediated signaling pathway	6.04E-04
43	GO:0010325: raffinose family oligosaccharide biosynthetic process	6.04E-04
44	GO:0060968: regulation of gene silencing	6.04E-04
45	GO:0010359: regulation of anion channel activity	6.04E-04
46	GO:0080024: indolebutyric acid metabolic process	8.63E-04
47	GO:0070676: intralumenal vesicle formation	8.63E-04
48	GO:0001676: long-chain fatty acid metabolic process	8.63E-04
49	GO:0072583: clathrin-dependent endocytosis	8.63E-04
50	GO:0071786: endoplasmic reticulum tubular network organization	8.63E-04
51	GO:0016192: vesicle-mediated transport	1.11E-03
52	GO:0006542: glutamine biosynthetic process	1.14E-03
53	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.14E-03
54	GO:0006623: protein targeting to vacuole	1.37E-03
55	GO:0009749: response to glucose	1.37E-03
56	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	1.45E-03
57	GO:0000302: response to reactive oxygen species	1.47E-03
58	GO:0006014: D-ribose metabolic process	1.78E-03
59	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.78E-03
60	GO:0048827: phyllome development	1.78E-03
61	GO:0016070: RNA metabolic process	1.78E-03
62	GO:0048232: male gamete generation	1.78E-03
63	GO:0043248: proteasome assembly	1.78E-03
64	GO:0048317: seed morphogenesis	1.78E-03
65	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.78E-03
66	GO:0035435: phosphate ion transmembrane transport	1.78E-03
67	GO:1902456: regulation of stomatal opening	1.78E-03
68	GO:0010337: regulation of salicylic acid metabolic process	1.78E-03
69	GO:0048444: floral organ morphogenesis	2.14E-03
70	GO:0000911: cytokinesis by cell plate formation	2.14E-03
71	GO:0009612: response to mechanical stimulus	2.14E-03
72	GO:0006694: steroid biosynthetic process	2.14E-03
73	GO:0050790: regulation of catalytic activity	2.52E-03
74	GO:0006955: immune response	2.52E-03
75	GO:0032875: regulation of DNA endoreduplication	2.91E-03
76	GO:2000070: regulation of response to water deprivation	2.91E-03
77	GO:1900150: regulation of defense response to fungus	2.91E-03
78	GO:0006506: GPI anchor biosynthetic process	2.91E-03
79	GO:0010078: maintenance of root meristem identity	2.91E-03
80	GO:0006499: N-terminal protein myristoylation	3.01E-03
81	GO:0043562: cellular response to nitrogen levels	3.33E-03
82	GO:0006002: fructose 6-phosphate metabolic process	3.33E-03
83	GO:0006526: arginine biosynthetic process	3.33E-03
84	GO:0009056: catabolic process	3.77E-03
85	GO:0009821: alkaloid biosynthetic process	3.77E-03
86	GO:0090333: regulation of stomatal closure	3.77E-03
87	GO:0055114: oxidation-reduction process	4.13E-03
88	GO:0048829: root cap development	4.69E-03
89	GO:0006896: Golgi to vacuole transport	4.69E-03
90	GO:0010015: root morphogenesis	5.19E-03
91	GO:0000038: very long-chain fatty acid metabolic process	5.19E-03
92	GO:0043085: positive regulation of catalytic activity	5.19E-03
93	GO:0015031: protein transport	5.28E-03
94	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.69E-03
95	GO:0071365: cellular response to auxin stimulus	5.69E-03
96	GO:0000266: mitochondrial fission	5.69E-03
97	GO:0046777: protein autophosphorylation	6.03E-03
98	GO:0018107: peptidyl-threonine phosphorylation	6.22E-03
99	GO:0006807: nitrogen compound metabolic process	6.22E-03
100	GO:0009933: meristem structural organization	6.76E-03
101	GO:0006511: ubiquitin-dependent protein catabolic process	7.07E-03
102	GO:0048367: shoot system development	7.31E-03
103	GO:0090351: seedling development	7.32E-03
104	GO:0010053: root epidermal cell differentiation	7.32E-03
105	GO:0009225: nucleotide-sugar metabolic process	7.32E-03
106	GO:0007031: peroxisome organization	7.32E-03
107	GO:0010167: response to nitrate	7.32E-03
108	GO:0006863: purine nucleobase transport	7.90E-03
109	GO:0018105: peptidyl-serine phosphorylation	8.78E-03
110	GO:0031408: oxylipin biosynthetic process	9.72E-03
111	GO:0030433: ubiquitin-dependent ERAD pathway	1.04E-02
112	GO:0042127: regulation of cell proliferation	1.17E-02
113	GO:0006662: glycerol ether metabolic process	1.38E-02
114	GO:0010182: sugar mediated signaling pathway	1.38E-02
115	GO:0061025: membrane fusion	1.45E-02
116	GO:0019252: starch biosynthetic process	1.52E-02
117	GO:0006635: fatty acid beta-oxidation	1.60E-02
118	GO:0002229: defense response to oomycetes	1.60E-02
119	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.65E-02
120	GO:0006464: cellular protein modification process	1.83E-02
121	GO:0035556: intracellular signal transduction	2.01E-02
122	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.16E-02
123	GO:0010029: regulation of seed germination	2.16E-02
124	GO:0042128: nitrate assimilation	2.24E-02
125	GO:0006906: vesicle fusion	2.24E-02
126	GO:0006508: proteolysis	2.41E-02
127	GO:0008219: cell death	2.51E-02
128	GO:0046686: response to cadmium ion	2.51E-02
129	GO:0048767: root hair elongation	2.60E-02
130	GO:0009813: flavonoid biosynthetic process	2.60E-02
131	GO:0010311: lateral root formation	2.60E-02
132	GO:0009631: cold acclimation	2.78E-02
133	GO:0010119: regulation of stomatal movement	2.78E-02
134	GO:0010200: response to chitin	2.94E-02
135	GO:0045087: innate immune response	2.97E-02
136	GO:0016051: carbohydrate biosynthetic process	2.97E-02
137	GO:0034599: cellular response to oxidative stress	3.06E-02
138	GO:0006887: exocytosis	3.35E-02
139	GO:0006886: intracellular protein transport	3.51E-02
140	GO:0009965: leaf morphogenesis	3.86E-02
141	GO:0006855: drug transmembrane transport	3.97E-02
142	GO:0042538: hyperosmotic salinity response	4.18E-02
143	GO:0009408: response to heat	4.18E-02
144	GO:0048364: root development	4.36E-02
145	GO:0006486: protein glycosylation	4.39E-02
146	GO:0009414: response to water deprivation	4.39E-02
147	GO:0051603: proteolysis involved in cellular protein catabolic process	4.50E-02
148	GO:0010224: response to UV-B	4.50E-02
149	GO:0006979: response to oxidative stress	4.56E-02
150	GO:0008152: metabolic process	4.60E-02
151	GO:0006096: glycolytic process	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0051723: protein methylesterase activity	0.00E+00
2	GO:0008777: acetylornithine deacetylase activity	0.00E+00
3	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
4	GO:0042030: ATPase inhibitor activity	0.00E+00
5	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
6	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
7	GO:0003837: beta-ureidopropionase activity	0.00E+00
8	GO:0019211: phosphatase activator activity	0.00E+00
9	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
10	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
11	GO:0004846: urate oxidase activity	0.00E+00
12	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.62E-04
13	GO:0032050: clathrin heavy chain binding	1.62E-04
14	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.62E-04
15	GO:0010209: vacuolar sorting signal binding	1.62E-04
16	GO:0015035: protein disulfide oxidoreductase activity	1.63E-04
17	GO:0010331: gibberellin binding	3.69E-04
18	GO:0004582: dolichyl-phosphate beta-D-mannosyltransferase activity	3.69E-04
19	GO:0004061: arylformamidase activity	3.69E-04
20	GO:0008430: selenium binding	6.04E-04
21	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	6.04E-04
22	GO:0050833: pyruvate transmembrane transporter activity	6.04E-04
23	GO:0000339: RNA cap binding	8.63E-04
24	GO:0004300: enoyl-CoA hydratase activity	8.63E-04
25	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	8.63E-04
26	GO:0008234: cysteine-type peptidase activity	8.93E-04
27	GO:0004930: G-protein coupled receptor activity	1.14E-03
28	GO:0050378: UDP-glucuronate 4-epimerase activity	1.14E-03
29	GO:0004356: glutamate-ammonia ligase activity	1.45E-03
30	GO:0045431: flavonol synthase activity	1.45E-03
31	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.45E-03
32	GO:0016491: oxidoreductase activity	1.54E-03
33	GO:0036402: proteasome-activating ATPase activity	1.78E-03
34	GO:0004866: endopeptidase inhibitor activity	1.78E-03
35	GO:0004526: ribonuclease P activity	1.78E-03
36	GO:0009055: electron carrier activity	2.06E-03
37	GO:0051213: dioxygenase activity	2.10E-03
38	GO:0051920: peroxiredoxin activity	2.14E-03
39	GO:0004747: ribokinase activity	2.14E-03
40	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.52E-03
41	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.52E-03
42	GO:0003872: 6-phosphofructokinase activity	2.52E-03
43	GO:0016209: antioxidant activity	2.91E-03
44	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.91E-03
45	GO:0008865: fructokinase activity	2.91E-03
46	GO:0003824: catalytic activity	4.08E-03
47	GO:0047617: acyl-CoA hydrolase activity	4.22E-03
48	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.22E-03
49	GO:0005484: SNAP receptor activity	4.45E-03
50	GO:0008794: arsenate reductase (glutaredoxin) activity	5.19E-03
51	GO:0005315: inorganic phosphate transmembrane transporter activity	6.22E-03
52	GO:0017025: TBP-class protein binding	7.32E-03
53	GO:0004674: protein serine/threonine kinase activity	7.35E-03
54	GO:0016301: kinase activity	8.40E-03
55	GO:0043130: ubiquitin binding	8.48E-03
56	GO:0005345: purine nucleobase transmembrane transporter activity	9.09E-03
57	GO:0035251: UDP-glucosyltransferase activity	9.72E-03
58	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.17E-02
59	GO:0047134: protein-disulfide reductase activity	1.24E-02
60	GO:0004791: thioredoxin-disulfide reductase activity	1.45E-02
61	GO:0050662: coenzyme binding	1.45E-02
62	GO:0004197: cysteine-type endopeptidase activity	1.67E-02
63	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.75E-02
64	GO:0008237: metallopeptidase activity	1.91E-02
65	GO:0016597: amino acid binding	1.99E-02
66	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.24E-02
67	GO:0004601: peroxidase activity	2.29E-02
68	GO:0004683: calmodulin-dependent protein kinase activity	2.33E-02
69	GO:0008236: serine-type peptidase activity	2.42E-02
70	GO:0005524: ATP binding	2.56E-02
71	GO:0005096: GTPase activator activity	2.60E-02
72	GO:0015238: drug transmembrane transporter activity	2.60E-02
73	GO:0050660: flavin adenine dinucleotide binding	2.65E-02
74	GO:0004497: monooxygenase activity	2.84E-02
75	GO:0005507: copper ion binding	2.93E-02
76	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.97E-02
77	GO:0000149: SNARE binding	3.16E-02
78	GO:0050661: NADP binding	3.26E-02
79	GO:0005515: protein binding	3.61E-02
80	GO:0051537: 2 iron, 2 sulfur cluster binding	3.76E-02
81	GO:0005198: structural molecule activity	3.86E-02
82	GO:0016787: hydrolase activity	3.98E-02
83	GO:0005509: calcium ion binding	4.09E-02
84	GO:0003924: GTPase activity	4.18E-02
85	GO:0016298: lipase activity	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.34E-04
2	GO:0017119: Golgi transport complex	2.60E-04
3	GO:0005777: peroxisome	2.83E-04
4	GO:0033185: dolichol-phosphate-mannose synthase complex	3.69E-04
5	GO:0005782: peroxisomal matrix	6.04E-04
6	GO:0005783: endoplasmic reticulum	7.67E-04
7	GO:0071782: endoplasmic reticulum tubular network	8.63E-04
8	GO:0000323: lytic vacuole	8.63E-04
9	GO:0016021: integral component of membrane	1.13E-03
10	GO:0005770: late endosome	1.19E-03
11	GO:0009504: cell plate	1.37E-03
12	GO:0005945: 6-phosphofructokinase complex	1.45E-03
13	GO:0005771: multivesicular body	1.78E-03
14	GO:0031597: cytosolic proteasome complex	2.14E-03
15	GO:0000815: ESCRT III complex	2.14E-03
16	GO:0031595: nuclear proteasome complex	2.52E-03
17	GO:0031305: integral component of mitochondrial inner membrane	2.91E-03
18	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.91E-03
19	GO:0031901: early endosome membrane	3.77E-03
20	GO:0030665: clathrin-coated vesicle membrane	4.22E-03
21	GO:0008540: proteasome regulatory particle, base subcomplex	4.22E-03
22	GO:0030125: clathrin vesicle coat	4.69E-03
23	GO:0090404: pollen tube tip	5.19E-03
24	GO:0000502: proteasome complex	5.99E-03
25	GO:0005764: lysosome	6.76E-03
26	GO:0005789: endoplasmic reticulum membrane	7.27E-03
27	GO:0010008: endosome membrane	7.31E-03
28	GO:0005622: intracellular	1.06E-02
29	GO:0005623: cell	1.10E-02
30	GO:0005887: integral component of plasma membrane	1.34E-02
31	GO:0032580: Golgi cisterna membrane	1.83E-02
32	GO:0005778: peroxisomal membrane	1.91E-02
33	GO:0000932: P-body	2.07E-02
34	GO:0005774: vacuolar membrane	2.95E-02
35	GO:0005829: cytosol	3.06E-02
36	GO:0031201: SNARE complex	3.35E-02
37	GO:0031902: late endosome membrane	3.35E-02
38	GO:0005802: trans-Golgi network	3.39E-02
39	GO:0005768: endosome	3.97E-02
40	GO:0005737: cytoplasm	4.52E-02
41	GO:0005635: nuclear envelope	4.61E-02