co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019284: L-methionine salvage from S-adenosylmethionine	0.00E+00
2	GO:0006642: triglyceride mobilization	0.00E+00
3	GO:0010027: thylakoid membrane organization	3.77E-06
4	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	2.41E-05
5	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	2.41E-05
6	GO:0018026: peptidyl-lysine monomethylation	6.16E-05
7	GO:0019563: glycerol catabolic process	1.09E-04
8	GO:0051604: protein maturation	1.09E-04
9	GO:0042780: tRNA 3'-end processing	1.09E-04
10	GO:0032504: multicellular organism reproduction	1.09E-04
11	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.09E-04
12	GO:0006457: protein folding	1.27E-04
13	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.62E-04
14	GO:0006986: response to unfolded protein	1.62E-04
15	GO:0051085: chaperone mediated protein folding requiring cofactor	1.62E-04
16	GO:0009658: chloroplast organization	1.70E-04
17	GO:0015995: chlorophyll biosynthetic process	2.15E-04
18	GO:0071483: cellular response to blue light	2.21E-04
19	GO:0045038: protein import into chloroplast thylakoid membrane	2.84E-04
20	GO:0042793: transcription from plastid promoter	3.51E-04
21	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.20E-04
22	GO:0019509: L-methionine salvage from methylthioadenosine	4.20E-04
23	GO:0006400: tRNA modification	4.92E-04
24	GO:0009772: photosynthetic electron transport in photosystem II	4.92E-04
25	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	4.92E-04
26	GO:0006605: protein targeting	5.68E-04
27	GO:0042255: ribosome assembly	5.68E-04
28	GO:0006353: DNA-templated transcription, termination	5.68E-04
29	GO:0071482: cellular response to light stimulus	6.45E-04
30	GO:1900865: chloroplast RNA modification	8.07E-04
31	GO:0009073: aromatic amino acid family biosynthetic process	9.78E-04
32	GO:0006352: DNA-templated transcription, initiation	9.78E-04
33	GO:0006094: gluconeogenesis	1.16E-03
34	GO:0010020: chloroplast fission	1.25E-03
35	GO:0019253: reductive pentose-phosphate cycle	1.25E-03
36	GO:0090351: seedling development	1.35E-03
37	GO:0080022: primary root development	2.33E-03
38	GO:0008033: tRNA processing	2.33E-03
39	GO:0032502: developmental process	2.95E-03
40	GO:0030001: metal ion transport	5.59E-03
41	GO:0006096: glycolytic process	8.40E-03
42	GO:0009451: RNA modification	1.43E-02
43	GO:0006412: translation	1.52E-02
44	GO:0008380: RNA splicing	1.59E-02
45	GO:0015979: photosynthesis	2.45E-02
46	GO:0009793: embryo development ending in seed dormancy	2.83E-02
47	GO:0032259: methylation	2.86E-02
48	GO:0008152: metabolic process	3.16E-02
49	GO:0009735: response to cytokinin	4.16E-02
50	GO:0009416: response to light stimulus	4.43E-02
51	GO:0045893: positive regulation of transcription, DNA-templated	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0046570: methylthioribulose 1-phosphate dehydratase activity	0.00E+00
2	GO:0043874: acireductone synthase activity	0.00E+00
3	GO:0046408: chlorophyll synthetase activity	0.00E+00
4	GO:0051087: chaperone binding	4.51E-07
5	GO:0019843: rRNA binding	1.54E-06
6	GO:0004807: triose-phosphate isomerase activity	2.41E-05
7	GO:0016630: protochlorophyllide reductase activity	6.16E-05
8	GO:0000774: adenyl-nucleotide exchange factor activity	6.16E-05
9	GO:0004751: ribose-5-phosphate isomerase activity	1.09E-04
10	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.09E-04
11	GO:0016279: protein-lysine N-methyltransferase activity	2.21E-04
12	GO:0001053: plastid sigma factor activity	2.21E-04
13	GO:0016987: sigma factor activity	2.21E-04
14	GO:0003959: NADPH dehydrogenase activity	2.84E-04
15	GO:0004033: aldo-keto reductase (NADP) activity	5.68E-04
16	GO:0051082: unfolded protein binding	7.36E-04
17	GO:0016787: hydrolase activity	8.76E-04
18	GO:0008266: poly(U) RNA binding	1.25E-03
19	GO:0005525: GTP binding	1.44E-03
20	GO:0000287: magnesium ion binding	1.85E-03
21	GO:0003727: single-stranded RNA binding	2.10E-03
22	GO:0042803: protein homodimerization activity	2.90E-03
23	GO:0008236: serine-type peptidase activity	4.20E-03
24	GO:0051539: 4 iron, 4 sulfur cluster binding	5.59E-03
25	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.76E-03
26	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	7.47E-03
27	GO:0003690: double-stranded DNA binding	7.65E-03
28	GO:0005507: copper ion binding	8.56E-03
29	GO:0008168: methyltransferase activity	1.86E-02
30	GO:0004601: peroxidase activity	1.92E-02
31	GO:0046872: metal ion binding	2.09E-02
32	GO:0008233: peptidase activity	2.20E-02
33	GO:0005515: protein binding	2.21E-02
34	GO:0003735: structural constituent of ribosome	2.44E-02
35	GO:0003723: RNA binding	2.52E-02
36	GO:0004519: endonuclease activity	3.13E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.07E-20
2	GO:0009570: chloroplast stroma	2.06E-15
3	GO:0009941: chloroplast envelope	1.99E-13
4	GO:0009535: chloroplast thylakoid membrane	9.62E-07
5	GO:0009547: plastid ribosome	2.41E-05
6	GO:0000427: plastid-encoded plastid RNA polymerase complex	6.16E-05
7	GO:0005759: mitochondrial matrix	7.90E-05
8	GO:0009579: thylakoid	1.11E-04
9	GO:0009534: chloroplast thylakoid	1.13E-04
10	GO:0009526: plastid envelope	2.21E-04
11	GO:0055035: plastid thylakoid membrane	2.84E-04
12	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	6.45E-04
13	GO:0000311: plastid large ribosomal subunit	1.07E-03
14	GO:0009508: plastid chromosome	1.16E-03
15	GO:0000312: plastid small ribosomal subunit	1.25E-03
16	GO:0042651: thylakoid membrane	1.65E-03
17	GO:0031969: chloroplast membrane	2.32E-03
18	GO:0009295: nucleoid	3.35E-03
19	GO:0009706: chloroplast inner membrane	9.56E-03
20	GO:0009543: chloroplast thylakoid lumen	1.12E-02
21	GO:0005840: ribosome	1.28E-02
22	GO:0022627: cytosolic small ribosomal subunit	1.71E-02
23	GO:0043231: intracellular membrane-bounded organelle	3.16E-02
24	GO:0022626: cytosolic ribosome	4.30E-02