co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G14415

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
2	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
3	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
4	GO:0016119: carotene metabolic process	7.41E-06
5	GO:0080167: response to karrikin	2.60E-05
6	GO:0044375: regulation of peroxisome size	3.67E-05
7	GO:0042823: pyridoxal phosphate biosynthetic process	5.65E-05
8	GO:0009853: photorespiration	6.46E-05
9	GO:0019464: glycine decarboxylation via glycine cleavage system	7.90E-05
10	GO:0006546: glycine catabolic process	7.90E-05
11	GO:0048442: sepal development	7.90E-05
12	GO:0016094: polyprenol biosynthetic process	1.04E-04
13	GO:0019408: dolichol biosynthetic process	1.04E-04
14	GO:0016120: carotene biosynthetic process	1.04E-04
15	GO:0043097: pyrimidine nucleoside salvage	1.04E-04
16	GO:0016123: xanthophyll biosynthetic process	1.04E-04
17	GO:0006206: pyrimidine nucleobase metabolic process	1.30E-04
18	GO:0010076: maintenance of floral meristem identity	1.59E-04
19	GO:0009854: oxidative photosynthetic carbon pathway	1.59E-04
20	GO:0016559: peroxisome fission	2.20E-04
21	GO:0071482: cellular response to light stimulus	2.52E-04
22	GO:0022900: electron transport chain	2.52E-04
23	GO:0048441: petal development	3.54E-04
24	GO:0018119: peptidyl-cysteine S-nitrosylation	3.90E-04
25	GO:0048440: carpel development	5.02E-04
26	GO:0019253: reductive pentose-phosphate cycle	5.02E-04
27	GO:0007031: peroxisome organization	5.40E-04
28	GO:0006636: unsaturated fatty acid biosynthetic process	5.80E-04
29	GO:0030433: ubiquitin-dependent ERAD pathway	7.45E-04
30	GO:0048443: stamen development	8.32E-04
31	GO:0016117: carotenoid biosynthetic process	8.75E-04
32	GO:0042631: cellular response to water deprivation	9.19E-04
33	GO:0055114: oxidation-reduction process	1.07E-03
34	GO:0009637: response to blue light	1.95E-03
35	GO:0000209: protein polyubiquitination	2.38E-03
36	GO:0000165: MAPK cascade	2.63E-03
37	GO:0006486: protein glycosylation	2.82E-03
38	GO:0009585: red, far-red light phototransduction	2.82E-03
39	GO:0006468: protein phosphorylation	3.88E-03
40	GO:0009058: biosynthetic process	4.33E-03
41	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	6.67E-03
42	GO:0006970: response to osmotic stress	7.41E-03
43	GO:0009723: response to ethylene	7.79E-03
44	GO:0009735: response to cytokinin	1.51E-02
45	GO:0035556: intracellular signal transduction	1.68E-02
46	GO:0042742: defense response to bacterium	2.67E-02
47	GO:0030154: cell differentiation	2.83E-02
48	GO:0009409: response to cold	3.31E-02
49	GO:0046686: response to cadmium ion	3.66E-02

Rank	GO Term	Adjusted P value
1	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
2	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
3	GO:0008974: phosphoribulokinase activity	0.00E+00
4	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
5	GO:0008465: glycerate dehydrogenase activity	0.00E+00
6	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
7	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
8	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
9	GO:0010291: carotene beta-ring hydroxylase activity	2.00E-05
10	GO:0004375: glycine dehydrogenase (decarboxylating) activity	5.65E-05
11	GO:0008453: alanine-glyoxylate transaminase activity	7.90E-05
12	GO:0045547: dehydrodolichyl diphosphate synthase activity	1.04E-04
13	GO:0002094: polyprenyltransferase activity	1.04E-04
14	GO:0004849: uridine kinase activity	1.59E-04
15	GO:0042802: identical protein binding	3.91E-04
16	GO:0008266: poly(U) RNA binding	5.02E-04
17	GO:0051537: 2 iron, 2 sulfur cluster binding	2.44E-03
18	GO:0051287: NAD binding	2.63E-03
19	GO:0031625: ubiquitin protein ligase binding	3.03E-03
20	GO:0004672: protein kinase activity	4.24E-03
21	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.57E-03
22	GO:0046982: protein heterodimerization activity	6.95E-03
23	GO:0061630: ubiquitin protein ligase activity	8.47E-03
24	GO:0004871: signal transducer activity	9.58E-03
25	GO:0005515: protein binding	1.04E-02
26	GO:0009055: electron carrier activity	1.13E-02
27	GO:0005524: ATP binding	2.31E-02
28	GO:0005506: iron ion binding	2.64E-02
29	GO:0003824: catalytic activity	2.85E-02
30	GO:0016491: oxidoreductase activity	3.25E-02
31	GO:0046983: protein dimerization activity	3.28E-02
32	GO:0016787: hydrolase activity	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.23E-07
2	GO:0009509: chromoplast	3.67E-05
3	GO:0005960: glycine cleavage complex	5.65E-05
4	GO:0005777: peroxisome	1.37E-04
5	GO:0048046: apoplast	1.92E-04
6	GO:0005779: integral component of peroxisomal membrane	2.52E-04
7	GO:0009941: chloroplast envelope	2.93E-04
8	GO:0009570: chloroplast stroma	4.93E-04
9	GO:0031969: chloroplast membrane	5.83E-04
10	GO:0005778: peroxisomal membrane	1.30E-03
11	GO:0010319: stromule	1.30E-03
12	GO:0009707: chloroplast outer membrane	1.67E-03
13	GO:0005834: heterotrimeric G-protein complex	3.30E-03
14	GO:0009543: chloroplast thylakoid lumen	4.18E-03
15	GO:0046658: anchored component of plasma membrane	6.32E-03
16	GO:0009535: chloroplast thylakoid membrane	6.44E-03
17	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	7.50E-03
18	GO:0009579: thylakoid	1.83E-02
19	GO:0009534: chloroplast thylakoid	1.84E-02
20	GO:0031225: anchored component of membrane	2.21E-02
21	GO:0009536: plastid	3.08E-02