Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G14230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048227: plasma membrane to endosome transport0.00E+00
2GO:0033587: shikimate biosynthetic process0.00E+00
3GO:0010398: xylogalacturonan metabolic process0.00E+00
4GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
5GO:1901969: positive regulation of polynucleotide 3'-phosphatase activity0.00E+00
6GO:0006182: cGMP biosynthetic process0.00E+00
7GO:0006266: DNA ligation0.00E+00
8GO:0043269: regulation of ion transport0.00E+00
9GO:1901972: positive regulation of DNA-5-methylcytosine glycosylase activity0.00E+00
10GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
11GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
12GO:0000162: tryptophan biosynthetic process2.39E-08
13GO:0009617: response to bacterium1.09E-07
14GO:0009682: induced systemic resistance3.48E-07
15GO:0071456: cellular response to hypoxia3.70E-06
16GO:0019438: aromatic compound biosynthetic process2.19E-05
17GO:0010363: regulation of plant-type hypersensitive response3.99E-05
18GO:0055114: oxidation-reduction process4.27E-05
19GO:0009061: anaerobic respiration2.16E-04
20GO:0009851: auxin biosynthetic process2.29E-04
21GO:1901183: positive regulation of camalexin biosynthetic process2.39E-04
22GO:0032469: endoplasmic reticulum calcium ion homeostasis2.39E-04
23GO:0080120: CAAX-box protein maturation2.39E-04
24GO:0071586: CAAX-box protein processing2.39E-04
25GO:0006431: methionyl-tRNA aminoacylation2.39E-04
26GO:0051245: negative regulation of cellular defense response2.39E-04
27GO:0010726: positive regulation of hydrogen peroxide metabolic process2.39E-04
28GO:0010120: camalexin biosynthetic process2.67E-04
29GO:0043069: negative regulation of programmed cell death4.48E-04
30GO:0052544: defense response by callose deposition in cell wall5.19E-04
31GO:0051258: protein polymerization5.29E-04
32GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine5.29E-04
33GO:0060919: auxin influx5.29E-04
34GO:2000693: positive regulation of seed maturation5.29E-04
35GO:0019441: tryptophan catabolic process to kynurenine5.29E-04
36GO:0009727: detection of ethylene stimulus5.29E-04
37GO:0046686: response to cadmium ion6.22E-04
38GO:0010043: response to zinc ion6.94E-04
39GO:0042343: indole glucosinolate metabolic process8.45E-04
40GO:0071398: cellular response to fatty acid8.60E-04
41GO:0042256: mature ribosome assembly8.60E-04
42GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway8.60E-04
43GO:0048281: inflorescence morphogenesis8.60E-04
44GO:1902626: assembly of large subunit precursor of preribosome8.60E-04
45GO:0032259: methylation8.99E-04
46GO:0010116: positive regulation of abscisic acid biosynthetic process1.23E-03
47GO:0009399: nitrogen fixation1.23E-03
48GO:0006612: protein targeting to membrane1.23E-03
49GO:0071215: cellular response to abscisic acid stimulus1.48E-03
50GO:0080142: regulation of salicylic acid biosynthetic process1.64E-03
51GO:0033320: UDP-D-xylose biosynthetic process1.64E-03
52GO:1902584: positive regulation of response to water deprivation1.64E-03
53GO:0000460: maturation of 5.8S rRNA1.64E-03
54GO:0010107: potassium ion import1.64E-03
55GO:0010600: regulation of auxin biosynthetic process1.64E-03
56GO:0006468: protein phosphorylation1.91E-03
57GO:0009626: plant-type hypersensitive response2.07E-03
58GO:0007029: endoplasmic reticulum organization2.09E-03
59GO:0030308: negative regulation of cell growth2.09E-03
60GO:0000304: response to singlet oxygen2.09E-03
61GO:0009697: salicylic acid biosynthetic process2.09E-03
62GO:0009759: indole glucosinolate biosynthetic process2.57E-03
63GO:0010942: positive regulation of cell death2.57E-03
64GO:0001731: formation of translation preinitiation complex2.57E-03
65GO:0000470: maturation of LSU-rRNA2.57E-03
66GO:0042732: D-xylose metabolic process2.57E-03
67GO:0009267: cellular response to starvation2.57E-03
68GO:0010315: auxin efflux2.57E-03
69GO:0010583: response to cyclopentenone2.67E-03
70GO:0050832: defense response to fungus2.90E-03
71GO:0010252: auxin homeostasis3.03E-03
72GO:0000054: ribosomal subunit export from nucleus3.09E-03
73GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.09E-03
74GO:1902074: response to salt3.64E-03
75GO:0046470: phosphatidylcholine metabolic process3.64E-03
76GO:0070370: cellular heat acclimation3.64E-03
77GO:0080111: DNA demethylation3.64E-03
78GO:0009816: defense response to bacterium, incompatible interaction3.81E-03
79GO:0016559: peroxisome fission4.23E-03
80GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.23E-03
81GO:0030091: protein repair4.23E-03
82GO:0030968: endoplasmic reticulum unfolded protein response4.84E-03
83GO:0009808: lignin metabolic process4.84E-03
84GO:0006303: double-strand break repair via nonhomologous end joining4.84E-03
85GO:0010311: lateral root formation4.94E-03
86GO:0034765: regulation of ion transmembrane transport5.48E-03
87GO:0090333: regulation of stomatal closure5.48E-03
88GO:0010112: regulation of systemic acquired resistance5.48E-03
89GO:0007338: single fertilization5.48E-03
90GO:0006098: pentose-phosphate shunt5.48E-03
91GO:0090305: nucleic acid phosphodiester bond hydrolysis5.48E-03
92GO:0008202: steroid metabolic process6.15E-03
93GO:0006535: cysteine biosynthetic process from serine6.85E-03
94GO:0006032: chitin catabolic process6.85E-03
95GO:0009688: abscisic acid biosynthetic process6.85E-03
96GO:0048829: root cap development6.85E-03
97GO:0007064: mitotic sister chromatid cohesion6.85E-03
98GO:0000272: polysaccharide catabolic process7.58E-03
99GO:0030148: sphingolipid biosynthetic process7.58E-03
100GO:0009698: phenylpropanoid metabolic process7.58E-03
101GO:0071365: cellular response to auxin stimulus8.33E-03
102GO:0000266: mitochondrial fission8.33E-03
103GO:0002213: defense response to insect8.33E-03
104GO:0006979: response to oxidative stress9.21E-03
105GO:0006446: regulation of translational initiation9.92E-03
106GO:0010540: basipetal auxin transport9.92E-03
107GO:0034605: cellular response to heat9.92E-03
108GO:0006541: glutamine metabolic process9.92E-03
109GO:0002237: response to molecule of bacterial origin9.92E-03
110GO:0006813: potassium ion transport1.04E-02
111GO:0071732: cellular response to nitric oxide1.07E-02
112GO:0010030: positive regulation of seed germination1.07E-02
113GO:0070588: calcium ion transmembrane transport1.07E-02
114GO:0010053: root epidermal cell differentiation1.07E-02
115GO:0009225: nucleotide-sugar metabolic process1.07E-02
116GO:0007031: peroxisome organization1.07E-02
117GO:0009733: response to auxin1.11E-02
118GO:0046777: protein autophosphorylation1.21E-02
119GO:0019344: cysteine biosynthetic process1.25E-02
120GO:0009863: salicylic acid mediated signaling pathway1.25E-02
121GO:0080147: root hair cell development1.25E-02
122GO:0009620: response to fungus1.35E-02
123GO:0016998: cell wall macromolecule catabolic process1.43E-02
124GO:0048278: vesicle docking1.43E-02
125GO:0031408: oxylipin biosynthetic process1.43E-02
126GO:0035428: hexose transmembrane transport1.53E-02
127GO:0016226: iron-sulfur cluster assembly1.53E-02
128GO:0006012: galactose metabolic process1.62E-02
129GO:0009693: ethylene biosynthetic process1.62E-02
130GO:0010584: pollen exine formation1.72E-02
131GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.82E-02
132GO:0070417: cellular response to cold1.82E-02
133GO:0042391: regulation of membrane potential1.93E-02
134GO:0046323: glucose import2.03E-02
135GO:0045489: pectin biosynthetic process2.03E-02
136GO:0006885: regulation of pH2.03E-02
137GO:0048544: recognition of pollen2.14E-02
138GO:0061025: membrane fusion2.14E-02
139GO:0002229: defense response to oomycetes2.36E-02
140GO:0009630: gravitropism2.47E-02
141GO:0007264: small GTPase mediated signal transduction2.47E-02
142GO:0071281: cellular response to iron ion2.59E-02
143GO:1901657: glycosyl compound metabolic process2.59E-02
144GO:0006914: autophagy2.71E-02
145GO:0009567: double fertilization forming a zygote and endosperm2.71E-02
146GO:0019760: glucosinolate metabolic process2.71E-02
147GO:0009651: response to salt stress2.79E-02
148GO:0007166: cell surface receptor signaling pathway2.93E-02
149GO:0042742: defense response to bacterium2.93E-02
150GO:0051607: defense response to virus2.95E-02
151GO:0009737: response to abscisic acid3.29E-02
152GO:0006906: vesicle fusion3.32E-02
153GO:0009627: systemic acquired resistance3.32E-02
154GO:0006950: response to stress3.45E-02
155GO:0009738: abscisic acid-activated signaling pathway3.58E-02
156GO:0008219: cell death3.71E-02
157GO:0009817: defense response to fungus, incompatible interaction3.71E-02
158GO:0048767: root hair elongation3.84E-02
159GO:0035556: intracellular signal transduction3.99E-02
160GO:0009631: cold acclimation4.11E-02
161GO:0007568: aging4.11E-02
162GO:0015031: protein transport4.15E-02
163GO:0006970: response to osmotic stress4.26E-02
164GO:0009867: jasmonic acid mediated signaling pathway4.39E-02
165GO:0045087: innate immune response4.39E-02
166GO:0006099: tricarboxylic acid cycle4.53E-02
167GO:0080167: response to karrikin4.89E-02
168GO:0006887: exocytosis4.95E-02
169GO:0006631: fatty acid metabolic process4.95E-02
RankGO TermAdjusted P value
1GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
2GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives0.00E+00
5GO:0004049: anthranilate synthase activity9.64E-06
6GO:0010279: indole-3-acetic acid amido synthetase activity3.99E-05
7GO:0004834: tryptophan synthase activity3.99E-05
8GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.67E-05
9GO:0004825: methionine-tRNA ligase activity2.39E-04
10GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.39E-04
11GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity2.39E-04
12GO:0004425: indole-3-glycerol-phosphate synthase activity2.39E-04
13GO:0033984: indole-3-glycerol-phosphate lyase activity2.39E-04
14GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.39E-04
15GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity3.23E-04
16GO:0050660: flavin adenine dinucleotide binding4.30E-04
17GO:0008171: O-methyltransferase activity4.48E-04
18GO:0004713: protein tyrosine kinase activity4.48E-04
19GO:0047372: acylglycerol lipase activity5.19E-04
20GO:0004061: arylformamidase activity5.29E-04
21GO:0004142: diacylglycerol cholinephosphotransferase activity5.29E-04
22GO:0003958: NADPH-hemoprotein reductase activity5.29E-04
23GO:0004750: ribulose-phosphate 3-epimerase activity5.29E-04
24GO:0032934: sterol binding5.29E-04
25GO:0045140: inositol phosphoceramide synthase activity5.29E-04
26GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.94E-04
27GO:0016301: kinase activity7.23E-04
28GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.60E-04
29GO:0004383: guanylate cyclase activity8.60E-04
30GO:0016595: glutamate binding8.60E-04
31GO:0005093: Rab GDP-dissociation inhibitor activity8.60E-04
32GO:0004324: ferredoxin-NADP+ reductase activity8.60E-04
33GO:0031418: L-ascorbic acid binding1.04E-03
34GO:0016656: monodehydroascorbate reductase (NADH) activity1.23E-03
35GO:0043023: ribosomal large subunit binding1.23E-03
36GO:0004674: protein serine/threonine kinase activity1.37E-03
37GO:0008168: methyltransferase activity1.61E-03
38GO:0004031: aldehyde oxidase activity1.64E-03
39GO:0050302: indole-3-acetaldehyde oxidase activity1.64E-03
40GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.64E-03
41GO:0043015: gamma-tubulin binding1.64E-03
42GO:0010328: auxin influx transmembrane transporter activity1.64E-03
43GO:0010385: double-stranded methylated DNA binding1.64E-03
44GO:0005496: steroid binding2.09E-03
45GO:0004356: glutamate-ammonia ligase activity2.09E-03
46GO:0010181: FMN binding2.18E-03
47GO:0035252: UDP-xylosyltransferase activity2.57E-03
48GO:0048040: UDP-glucuronate decarboxylase activity2.57E-03
49GO:0005506: iron ion binding2.60E-03
50GO:0004656: procollagen-proline 4-dioxygenase activity3.09E-03
51GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.09E-03
52GO:0005242: inward rectifier potassium channel activity3.09E-03
53GO:0004124: cysteine synthase activity3.09E-03
54GO:0070403: NAD+ binding3.09E-03
55GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.09E-03
56GO:0102391: decanoate--CoA ligase activity3.09E-03
57GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.50E-03
58GO:0004620: phospholipase activity3.64E-03
59GO:0004467: long-chain fatty acid-CoA ligase activity3.64E-03
60GO:0102425: myricetin 3-O-glucosyltransferase activity3.64E-03
61GO:0102360: daphnetin 3-O-glucosyltransferase activity3.64E-03
62GO:0004033: aldo-keto reductase (NADP) activity4.23E-03
63GO:0043022: ribosome binding4.23E-03
64GO:0004034: aldose 1-epimerase activity4.23E-03
65GO:0047893: flavonol 3-O-glucosyltransferase activity4.23E-03
66GO:0016491: oxidoreductase activity4.61E-03
67GO:0008142: oxysterol binding4.84E-03
68GO:0071949: FAD binding5.48E-03
69GO:0004712: protein serine/threonine/tyrosine kinase activity6.50E-03
70GO:0020037: heme binding6.57E-03
71GO:0004568: chitinase activity6.85E-03
72GO:0005543: phospholipid binding7.58E-03
73GO:0043621: protein self-association8.31E-03
74GO:0000049: tRNA binding8.33E-03
75GO:0004521: endoribonuclease activity8.33E-03
76GO:0010329: auxin efflux transmembrane transporter activity9.11E-03
77GO:0004022: alcohol dehydrogenase (NAD) activity9.11E-03
78GO:0005262: calcium channel activity9.11E-03
79GO:0005388: calcium-transporting ATPase activity9.11E-03
80GO:0004175: endopeptidase activity9.92E-03
81GO:0005524: ATP binding1.01E-02
82GO:0008061: chitin binding1.07E-02
83GO:0008233: peptidase activity1.09E-02
84GO:0045735: nutrient reservoir activity1.23E-02
85GO:0051536: iron-sulfur cluster binding1.25E-02
86GO:0043130: ubiquitin binding1.25E-02
87GO:0004298: threonine-type endopeptidase activity1.43E-02
88GO:0008408: 3'-5' exonuclease activity1.43E-02
89GO:0035251: UDP-glucosyltransferase activity1.43E-02
90GO:0030246: carbohydrate binding1.60E-02
91GO:0019825: oxygen binding1.74E-02
92GO:0005451: monovalent cation:proton antiporter activity1.93E-02
93GO:0030551: cyclic nucleotide binding1.93E-02
94GO:0009055: electron carrier activity1.99E-02
95GO:0003713: transcription coactivator activity2.03E-02
96GO:0016853: isomerase activity2.14E-02
97GO:0015299: solute:proton antiporter activity2.14E-02
98GO:0005355: glucose transmembrane transporter activity2.14E-02
99GO:0015144: carbohydrate transmembrane transporter activity2.22E-02
100GO:0005351: sugar:proton symporter activity2.51E-02
101GO:0015385: sodium:proton antiporter activity2.59E-02
102GO:0005509: calcium ion binding2.61E-02
103GO:0008017: microtubule binding2.68E-02
104GO:0003743: translation initiation factor activity2.99E-02
105GO:0051213: dioxygenase activity3.07E-02
106GO:0005515: protein binding3.10E-02
107GO:0042802: identical protein binding3.26E-02
108GO:0009931: calcium-dependent protein serine/threonine kinase activity3.32E-02
109GO:0003824: catalytic activity3.36E-02
110GO:0030247: polysaccharide binding3.45E-02
111GO:0004683: calmodulin-dependent protein kinase activity3.45E-02
112GO:0102483: scopolin beta-glucosidase activity3.45E-02
113GO:0008236: serine-type peptidase activity3.58E-02
114GO:0005096: GTPase activator activity3.84E-02
115GO:0004222: metalloendopeptidase activity3.97E-02
116GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.39E-02
117GO:0003746: translation elongation factor activity4.39E-02
118GO:0008422: beta-glucosidase activity4.67E-02
119GO:0000149: SNARE binding4.67E-02
120GO:0051539: 4 iron, 4 sulfur cluster binding4.81E-02
121GO:0050661: NADP binding4.81E-02
RankGO TermAdjusted P value
1GO:0005783: endoplasmic reticulum6.23E-07
2GO:0005829: cytosol1.87E-05
3GO:0016021: integral component of membrane3.88E-05
4GO:0005886: plasma membrane7.29E-05
5GO:0045252: oxoglutarate dehydrogenase complex2.39E-04
6GO:0005950: anthranilate synthase complex5.29E-04
7GO:0030176: integral component of endoplasmic reticulum membrane8.45E-04
8GO:0005853: eukaryotic translation elongation factor 1 complex8.60E-04
9GO:0042406: extrinsic component of endoplasmic reticulum membrane8.60E-04
10GO:0000502: proteasome complex1.55E-03
11GO:0005773: vacuole1.69E-03
12GO:0016282: eukaryotic 43S preinitiation complex2.57E-03
13GO:0033290: eukaryotic 48S preinitiation complex3.09E-03
14GO:0005778: peroxisomal membrane3.21E-03
15GO:0030687: preribosome, large subunit precursor3.64E-03
16GO:0005774: vacuolar membrane4.18E-03
17GO:0005779: integral component of peroxisomal membrane4.84E-03
18GO:0005578: proteinaceous extracellular matrix9.11E-03
19GO:0005794: Golgi apparatus9.86E-03
20GO:0016020: membrane1.13E-02
21GO:0005839: proteasome core complex1.43E-02
22GO:0005737: cytoplasm1.80E-02
23GO:0005789: endoplasmic reticulum membrane1.89E-02
24GO:0032580: Golgi cisterna membrane2.71E-02
25GO:0009707: chloroplast outer membrane3.71E-02
26GO:0000325: plant-type vacuole4.11E-02
27GO:0031201: SNARE complex4.95E-02
Gene type



Gene DE type





AT3G09410