co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G13910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070328: triglyceride homeostasis	0.00E+00
2	GO:0042430: indole-containing compound metabolic process	0.00E+00
3	GO:0055091: phospholipid homeostasis	0.00E+00
4	GO:0030149: sphingolipid catabolic process	0.00E+00
5	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
6	GO:0034050: host programmed cell death induced by symbiont	0.00E+00
7	GO:0006511: ubiquitin-dependent protein catabolic process	6.99E-07
8	GO:0009617: response to bacterium	1.21E-05
9	GO:0009609: response to symbiotic bacterium	9.69E-05
10	GO:0048448: stamen morphogenesis	9.69E-05
11	GO:0010450: inflorescence meristem growth	9.69E-05
12	GO:0051245: negative regulation of cellular defense response	9.69E-05
13	GO:0080173: male-female gamete recognition during double fertilization	9.69E-05
14	GO:0019752: carboxylic acid metabolic process	2.28E-04
15	GO:0045905: positive regulation of translational termination	2.28E-04
16	GO:0015914: phospholipid transport	2.28E-04
17	GO:0045901: positive regulation of translational elongation	2.28E-04
18	GO:0055088: lipid homeostasis	2.28E-04
19	GO:0006452: translational frameshifting	2.28E-04
20	GO:0048833: specification of floral organ number	2.28E-04
21	GO:0019521: D-gluconate metabolic process	2.28E-04
22	GO:0006825: copper ion transport	3.41E-04
23	GO:0055074: calcium ion homeostasis	3.80E-04
24	GO:0072661: protein targeting to plasma membrane	3.80E-04
25	GO:0009626: plant-type hypersensitive response	4.32E-04
26	GO:0043207: response to external biotic stimulus	5.46E-04
27	GO:0010148: transpiration	5.46E-04
28	GO:0006612: protein targeting to membrane	5.46E-04
29	GO:0001676: long-chain fatty acid metabolic process	5.46E-04
30	GO:0055089: fatty acid homeostasis	5.46E-04
31	GO:0061025: membrane fusion	6.54E-04
32	GO:0010363: regulation of plant-type hypersensitive response	7.26E-04
33	GO:0034440: lipid oxidation	7.26E-04
34	GO:0010193: response to ozone	7.47E-04
35	GO:0046283: anthocyanin-containing compound metabolic process	9.17E-04
36	GO:0006564: L-serine biosynthetic process	9.17E-04
37	GO:0006979: response to oxidative stress	1.00E-03
38	GO:0000911: cytokinesis by cell plate formation	1.34E-03
39	GO:0009094: L-phenylalanine biosynthetic process	1.34E-03
40	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.34E-03
41	GO:0009612: response to mechanical stimulus	1.34E-03
42	GO:0080086: stamen filament development	1.34E-03
43	GO:0010119: regulation of stomatal movement	1.57E-03
44	GO:0070370: cellular heat acclimation	1.57E-03
45	GO:0009610: response to symbiotic fungus	1.57E-03
46	GO:0006099: tricarboxylic acid cycle	1.80E-03
47	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.81E-03
48	GO:0050821: protein stabilization	1.81E-03
49	GO:0006102: isocitrate metabolic process	1.81E-03
50	GO:0006887: exocytosis	2.04E-03
51	GO:0009880: embryonic pattern specification	2.07E-03
52	GO:0010204: defense response signaling pathway, resistance gene-independent	2.07E-03
53	GO:0022900: electron transport chain	2.07E-03
54	GO:0051707: response to other organism	2.21E-03
55	GO:0006457: protein folding	2.22E-03
56	GO:0006098: pentose-phosphate shunt	2.33E-03
57	GO:0046916: cellular transition metal ion homeostasis	2.33E-03
58	GO:0055114: oxidation-reduction process	2.37E-03
59	GO:0016192: vesicle-mediated transport	2.40E-03
60	GO:0046777: protein autophosphorylation	2.45E-03
61	GO:0044550: secondary metabolite biosynthetic process	2.50E-03
62	GO:0030042: actin filament depolymerization	2.61E-03
63	GO:0045454: cell redox homeostasis	2.82E-03
64	GO:0043069: negative regulation of programmed cell death	2.90E-03
65	GO:0006886: intracellular protein transport	2.93E-03
66	GO:0051603: proteolysis involved in cellular protein catabolic process	3.07E-03
67	GO:0012501: programmed cell death	3.50E-03
68	GO:0009620: response to fungus	3.84E-03
69	GO:0034605: cellular response to heat	4.15E-03
70	GO:0018105: peptidyl-serine phosphorylation	4.33E-03
71	GO:0042343: indole glucosinolate metabolic process	4.49E-03
72	GO:0009901: anther dehiscence	4.49E-03
73	GO:0046688: response to copper ion	4.49E-03
74	GO:0009969: xyloglucan biosynthetic process	4.49E-03
75	GO:0034976: response to endoplasmic reticulum stress	4.83E-03
76	GO:0009863: salicylic acid mediated signaling pathway	5.19E-03
77	GO:0080147: root hair cell development	5.19E-03
78	GO:0009695: jasmonic acid biosynthetic process	5.55E-03
79	GO:0048278: vesicle docking	5.93E-03
80	GO:0031408: oxylipin biosynthetic process	5.93E-03
81	GO:0098542: defense response to other organism	5.93E-03
82	GO:0015031: protein transport	6.30E-03
83	GO:0009814: defense response, incompatible interaction	6.31E-03
84	GO:0031348: negative regulation of defense response	6.31E-03
85	GO:0040007: growth	6.70E-03
86	GO:0009625: response to insect	6.70E-03
87	GO:0000413: protein peptidyl-prolyl isomerization	7.93E-03
88	GO:0048653: anther development	7.93E-03
89	GO:0042631: cellular response to water deprivation	7.93E-03
90	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	8.10E-03
91	GO:0009651: response to salt stress	8.19E-03
92	GO:0006520: cellular amino acid metabolic process	8.35E-03
93	GO:0010197: polar nucleus fusion	8.35E-03
94	GO:0046686: response to cadmium ion	8.57E-03
95	GO:0009646: response to absence of light	8.79E-03
96	GO:0006623: protein targeting to vacuole	9.23E-03
97	GO:0008654: phospholipid biosynthetic process	9.23E-03
98	GO:0000302: response to reactive oxygen species	9.68E-03
99	GO:0032502: developmental process	1.01E-02
100	GO:0030163: protein catabolic process	1.06E-02
101	GO:0010286: heat acclimation	1.16E-02
102	GO:0006904: vesicle docking involved in exocytosis	1.16E-02
103	GO:0016579: protein deubiquitination	1.20E-02
104	GO:0001666: response to hypoxia	1.25E-02
105	GO:0009816: defense response to bacterium, incompatible interaction	1.30E-02
106	GO:0009723: response to ethylene	1.30E-02
107	GO:0006906: vesicle fusion	1.36E-02
108	GO:0010200: response to chitin	1.44E-02
109	GO:0009832: plant-type cell wall biogenesis	1.57E-02
110	GO:0009407: toxin catabolic process	1.62E-02
111	GO:0010043: response to zinc ion	1.68E-02
112	GO:0009867: jasmonic acid mediated signaling pathway	1.79E-02
113	GO:0009853: photorespiration	1.79E-02
114	GO:0042742: defense response to bacterium	1.86E-02
115	GO:0006952: defense response	1.95E-02
116	GO:0030001: metal ion transport	1.96E-02
117	GO:0006631: fatty acid metabolic process	2.02E-02
118	GO:0009636: response to toxic substance	2.33E-02
119	GO:0009965: leaf morphogenesis	2.33E-02
120	GO:0006486: protein glycosylation	2.65E-02
121	GO:0009909: regulation of flower development	2.85E-02
122	GO:0006468: protein phosphorylation	3.39E-02
123	GO:0009738: abscisic acid-activated signaling pathway	3.54E-02
124	GO:0009555: pollen development	3.65E-02
125	GO:0009611: response to wounding	3.73E-02
126	GO:0035556: intracellular signal transduction	3.85E-02
127	GO:0009845: seed germination	4.23E-02
128	GO:0009790: embryo development	4.46E-02
129	GO:0009737: response to abscisic acid	4.76E-02
130	GO:0006413: translational initiation	4.78E-02
131	GO:0040008: regulation of growth	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
2	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
3	GO:0004298: threonine-type endopeptidase activity	1.41E-11
4	GO:0008233: peptidase activity	4.32E-09
5	GO:0008121: ubiquinol-cytochrome-c reductase activity	4.14E-05
6	GO:0031127: alpha-(1,2)-fucosyltransferase activity	9.69E-05
7	GO:0004617: phosphoglycerate dehydrogenase activity	2.28E-04
8	GO:0016165: linoleate 13S-lipoxygenase activity	3.80E-04
9	GO:0016531: copper chaperone activity	3.80E-04
10	GO:0004449: isocitrate dehydrogenase (NAD+) activity	5.46E-04
11	GO:0005516: calmodulin binding	5.89E-04
12	GO:0043495: protein anchor	7.26E-04
13	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	7.26E-04
14	GO:0047769: arogenate dehydratase activity	7.26E-04
15	GO:0004664: prephenate dehydratase activity	7.26E-04
16	GO:0005509: calcium ion binding	8.60E-04
17	GO:0004623: phospholipase A2 activity	9.17E-04
18	GO:0008237: metallopeptidase activity	9.50E-04
19	GO:0016597: amino acid binding	1.00E-03
20	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.18E-03
21	GO:0004683: calmodulin-dependent protein kinase activity	1.24E-03
22	GO:0102391: decanoate--CoA ligase activity	1.34E-03
23	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.34E-03
24	GO:0004656: procollagen-proline 4-dioxygenase activity	1.34E-03
25	GO:0008320: protein transmembrane transporter activity	1.57E-03
26	GO:0004467: long-chain fatty acid-CoA ligase activity	1.57E-03
27	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	1.57E-03
28	GO:0016831: carboxy-lyase activity	1.57E-03
29	GO:0043022: ribosome binding	1.81E-03
30	GO:0046914: transition metal ion binding	2.07E-03
31	GO:0005484: SNAP receptor activity	2.21E-03
32	GO:0008417: fucosyltransferase activity	2.33E-03
33	GO:0051287: NAD binding	2.67E-03
34	GO:0016298: lipase activity	3.07E-03
35	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.11E-03
36	GO:0004129: cytochrome-c oxidase activity	3.20E-03
37	GO:0008794: arsenate reductase (glutaredoxin) activity	3.20E-03
38	GO:0051082: unfolded protein binding	4.20E-03
39	GO:0016746: transferase activity, transferring acyl groups	4.33E-03
40	GO:0003712: transcription cofactor activity	4.49E-03
41	GO:0043424: protein histidine kinase binding	5.55E-03
42	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	5.93E-03
43	GO:0004540: ribonuclease activity	5.93E-03
44	GO:0003756: protein disulfide isomerase activity	7.10E-03
45	GO:0004843: thiol-dependent ubiquitin-specific protease activity	9.68E-03
46	GO:0008137: NADH dehydrogenase (ubiquinone) activity	9.68E-03
47	GO:0019825: oxygen binding	1.19E-02
48	GO:0004222: metalloendopeptidase activity	1.62E-02
49	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.68E-02
50	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.79E-02
51	GO:0003746: translation elongation factor activity	1.79E-02
52	GO:0005506: iron ion binding	1.83E-02
53	GO:0000149: SNARE binding	1.91E-02
54	GO:0004364: glutathione transferase activity	2.08E-02
55	GO:0009055: electron carrier activity	2.21E-02
56	GO:0051537: 2 iron, 2 sulfur cluster binding	2.27E-02
57	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.39E-02
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.19E-02
59	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.19E-02
60	GO:0022857: transmembrane transporter activity	3.26E-02
61	GO:0020037: heme binding	3.30E-02
62	GO:0003779: actin binding	3.33E-02
63	GO:0015035: protein disulfide oxidoreductase activity	3.48E-02
64	GO:0016758: transferase activity, transferring hexosyl groups	3.92E-02
65	GO:0030170: pyridoxal phosphate binding	4.30E-02
66	GO:0004674: protein serine/threonine kinase activity	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005839: proteasome core complex	1.41E-11
3	GO:0000502: proteasome complex	4.01E-10
4	GO:0019773: proteasome core complex, alpha-subunit complex	3.74E-09
5	GO:0005886: plasma membrane	6.32E-05
6	GO:0005750: mitochondrial respiratory chain complex III	2.19E-04
7	GO:0030134: ER to Golgi transport vesicle	2.28E-04
8	GO:0005901: caveola	2.28E-04
9	GO:0005758: mitochondrial intermembrane space	3.08E-04
10	GO:0005773: vacuole	5.39E-04
11	GO:0030658: transport vesicle membrane	5.46E-04
12	GO:0070062: extracellular exosome	5.46E-04
13	GO:0005829: cytosol	5.55E-04
14	GO:0009504: cell plate	6.99E-04
15	GO:0005774: vacuolar membrane	7.08E-04
16	GO:0005746: mitochondrial respiratory chain	9.17E-04
17	GO:0016020: membrane	9.41E-04
18	GO:0005788: endoplasmic reticulum lumen	1.12E-03
19	GO:0005801: cis-Golgi network	1.34E-03
20	GO:0045273: respiratory chain complex II	1.81E-03
21	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.81E-03
22	GO:0009507: chloroplast	1.95E-03
23	GO:0017119: Golgi transport complex	2.90E-03
24	GO:0031225: anchored component of membrane	2.95E-03
25	GO:0005802: trans-Golgi network	3.07E-03
26	GO:0008541: proteasome regulatory particle, lid subcomplex	3.20E-03
27	GO:0005747: mitochondrial respiratory chain complex I	3.61E-03
28	GO:0031012: extracellular matrix	3.82E-03
29	GO:0045271: respiratory chain complex I	5.55E-03
30	GO:0015629: actin cytoskeleton	6.70E-03
31	GO:0022626: cytosolic ribosome	7.20E-03
32	GO:0005789: endoplasmic reticulum membrane	8.32E-03
33	GO:0005737: cytoplasm	9.09E-03
34	GO:0005783: endoplasmic reticulum	9.92E-03
35	GO:0000785: chromatin	1.01E-02
36	GO:0000145: exocyst	1.01E-02
37	GO:0032580: Golgi cisterna membrane	1.11E-02
38	GO:0005768: endosome	1.63E-02
39	GO:0005819: spindle	1.91E-02
40	GO:0005739: mitochondrion	1.93E-02
41	GO:0031902: late endosome membrane	2.02E-02
42	GO:0031201: SNARE complex	2.02E-02
43	GO:0031966: mitochondrial membrane	2.52E-02
44	GO:0009506: plasmodesma	3.33E-02
45	GO:0005623: cell	4.07E-02
46	GO:0009524: phragmoplast	4.15E-02
47	GO:0005777: peroxisome	4.19E-02