co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G13520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:0090393: sepal giant cell development	0.00E+00
3	GO:0071555: cell wall organization	4.09E-07
4	GO:0010411: xyloglucan metabolic process	1.33E-06
5	GO:0042546: cell wall biogenesis	7.04E-06
6	GO:0071554: cell wall organization or biogenesis	1.08E-05
7	GO:0010583: response to cyclopentenone	1.25E-05
8	GO:0006546: glycine catabolic process	3.41E-05
9	GO:0071370: cellular response to gibberellin stimulus	2.18E-04
10	GO:0006723: cuticle hydrocarbon biosynthetic process	2.18E-04
11	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.86E-04
12	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.86E-04
13	GO:2000123: positive regulation of stomatal complex development	4.86E-04
14	GO:0060919: auxin influx	4.86E-04
15	GO:0015786: UDP-glucose transport	4.86E-04
16	GO:0016051: carbohydrate biosynthetic process	6.61E-04
17	GO:0015783: GDP-fucose transport	7.90E-04
18	GO:0006000: fructose metabolic process	7.90E-04
19	GO:0043447: alkane biosynthetic process	7.90E-04
20	GO:0015840: urea transport	7.90E-04
21	GO:0006833: water transport	8.29E-04
22	GO:0032877: positive regulation of DNA endoreduplication	1.13E-03
23	GO:0006166: purine ribonucleoside salvage	1.13E-03
24	GO:0007231: osmosensory signaling pathway	1.13E-03
25	GO:0006241: CTP biosynthetic process	1.13E-03
26	GO:0072334: UDP-galactose transmembrane transport	1.13E-03
27	GO:0080170: hydrogen peroxide transmembrane transport	1.13E-03
28	GO:0051016: barbed-end actin filament capping	1.13E-03
29	GO:0006165: nucleoside diphosphate phosphorylation	1.13E-03
30	GO:0006228: UTP biosynthetic process	1.13E-03
31	GO:0006168: adenine salvage	1.13E-03
32	GO:0015976: carbon utilization	1.50E-03
33	GO:0019464: glycine decarboxylation via glycine cleavage system	1.50E-03
34	GO:0006183: GTP biosynthetic process	1.50E-03
35	GO:0006749: glutathione metabolic process	1.50E-03
36	GO:2000122: negative regulation of stomatal complex development	1.50E-03
37	GO:0033500: carbohydrate homeostasis	1.50E-03
38	GO:2000038: regulation of stomatal complex development	1.50E-03
39	GO:0010037: response to carbon dioxide	1.50E-03
40	GO:0042335: cuticle development	1.66E-03
41	GO:0000271: polysaccharide biosynthetic process	1.66E-03
42	GO:0034220: ion transmembrane transport	1.66E-03
43	GO:0009741: response to brassinosteroid	1.78E-03
44	GO:0045489: pectin biosynthetic process	1.78E-03
45	GO:0044209: AMP salvage	1.91E-03
46	GO:0010375: stomatal complex patterning	1.91E-03
47	GO:0046785: microtubule polymerization	1.91E-03
48	GO:2000762: regulation of phenylpropanoid metabolic process	1.91E-03
49	GO:0080167: response to karrikin	1.93E-03
50	GO:0009742: brassinosteroid mediated signaling pathway	2.21E-03
51	GO:0007267: cell-cell signaling	2.82E-03
52	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.83E-03
53	GO:0045926: negative regulation of growth	2.83E-03
54	GO:0009612: response to mechanical stimulus	2.83E-03
55	GO:0009554: megasporogenesis	2.83E-03
56	GO:0016126: sterol biosynthetic process	3.17E-03
57	GO:0009645: response to low light intensity stimulus	3.33E-03
58	GO:0051510: regulation of unidimensional cell growth	3.33E-03
59	GO:0006633: fatty acid biosynthetic process	3.64E-03
60	GO:0007155: cell adhesion	3.86E-03
61	GO:0008610: lipid biosynthetic process	3.86E-03
62	GO:0006402: mRNA catabolic process	3.86E-03
63	GO:0009850: auxin metabolic process	3.86E-03
64	GO:0045010: actin nucleation	3.86E-03
65	GO:0009932: cell tip growth	4.42E-03
66	GO:0006002: fructose 6-phosphate metabolic process	4.42E-03
67	GO:0006754: ATP biosynthetic process	5.00E-03
68	GO:0009638: phototropism	5.62E-03
69	GO:0048829: root cap development	6.25E-03
70	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.25E-03
71	GO:0043069: negative regulation of programmed cell death	6.25E-03
72	GO:0000038: very long-chain fatty acid metabolic process	6.91E-03
73	GO:0006816: calcium ion transport	6.91E-03
74	GO:0009773: photosynthetic electron transport in photosystem I	6.91E-03
75	GO:0019684: photosynthesis, light reaction	6.91E-03
76	GO:0009089: lysine biosynthetic process via diaminopimelate	6.91E-03
77	GO:1903507: negative regulation of nucleic acid-templated transcription	6.91E-03
78	GO:0016024: CDP-diacylglycerol biosynthetic process	7.60E-03
79	GO:0030036: actin cytoskeleton organization	8.30E-03
80	GO:0050826: response to freezing	8.30E-03
81	GO:0009725: response to hormone	8.30E-03
82	GO:0006094: gluconeogenesis	8.30E-03
83	GO:0005986: sucrose biosynthetic process	8.30E-03
84	GO:2000028: regulation of photoperiodism, flowering	8.30E-03
85	GO:0010143: cutin biosynthetic process	9.03E-03
86	GO:0019253: reductive pentose-phosphate cycle	9.03E-03
87	GO:0051603: proteolysis involved in cellular protein catabolic process	9.40E-03
88	GO:0010167: response to nitrate	9.79E-03
89	GO:0005985: sucrose metabolic process	9.79E-03
90	GO:0070588: calcium ion transmembrane transport	9.79E-03
91	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.82E-03
92	GO:0009833: plant-type primary cell wall biogenesis	1.06E-02
93	GO:0010025: wax biosynthetic process	1.06E-02
94	GO:0006636: unsaturated fatty acid biosynthetic process	1.06E-02
95	GO:0055085: transmembrane transport	1.20E-02
96	GO:0007017: microtubule-based process	1.22E-02
97	GO:0042545: cell wall modification	1.26E-02
98	GO:0003333: amino acid transmembrane transport	1.30E-02
99	GO:0019748: secondary metabolic process	1.39E-02
100	GO:0010017: red or far-red light signaling pathway	1.39E-02
101	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.39E-02
102	GO:0006810: transport	1.40E-02
103	GO:0009294: DNA mediated transformation	1.48E-02
104	GO:0005975: carbohydrate metabolic process	1.49E-02
105	GO:0019722: calcium-mediated signaling	1.57E-02
106	GO:0080022: primary root development	1.75E-02
107	GO:0009958: positive gravitropism	1.85E-02
108	GO:0009791: post-embryonic development	2.05E-02
109	GO:0019252: starch biosynthetic process	2.05E-02
110	GO:0045490: pectin catabolic process	2.25E-02
111	GO:0048235: pollen sperm cell differentiation	2.25E-02
112	GO:0010090: trichome morphogenesis	2.36E-02
113	GO:0009617: response to bacterium	2.68E-02
114	GO:0009733: response to auxin	2.86E-02
115	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.91E-02
116	GO:0042128: nitrate assimilation	3.02E-02
117	GO:0016311: dephosphorylation	3.25E-02
118	GO:0009826: unidimensional cell growth	3.34E-02
119	GO:0000160: phosphorelay signal transduction system	3.49E-02
120	GO:0010311: lateral root formation	3.49E-02
121	GO:0009407: toxin catabolic process	3.62E-02
122	GO:0010218: response to far red light	3.62E-02
123	GO:0007568: aging	3.74E-02
124	GO:0010119: regulation of stomatal movement	3.74E-02
125	GO:0006865: amino acid transport	3.86E-02
126	GO:0007049: cell cycle	3.87E-02
127	GO:0009867: jasmonic acid mediated signaling pathway	3.99E-02
128	GO:0006631: fatty acid metabolic process	4.51E-02
129	GO:0010114: response to red light	4.78E-02
130	GO:0009926: auxin polar transport	4.78E-02
131	GO:0009744: response to sucrose	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0047889: ferredoxin-nitrate reductase activity	0.00E+00
2	GO:0048307: ferredoxin-nitrite reductase activity	0.00E+00
3	GO:0050613: delta14-sterol reductase activity	0.00E+00
4	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
5	GO:0050421: nitrite reductase (NO-forming) activity	0.00E+00
6	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.07E-07
7	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.33E-06
8	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.85E-05
9	GO:0016413: O-acetyltransferase activity	2.09E-05
10	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.73E-05
11	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.18E-04
12	GO:0008252: nucleotidase activity	2.18E-04
13	GO:0080132: fatty acid alpha-hydroxylase activity	2.18E-04
14	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	2.18E-04
15	GO:0003838: sterol 24-C-methyltransferase activity	2.18E-04
16	GO:0042389: omega-3 fatty acid desaturase activity	4.86E-04
17	GO:0004047: aminomethyltransferase activity	4.86E-04
18	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.86E-04
19	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	4.86E-04
20	GO:0005457: GDP-fucose transmembrane transporter activity	7.90E-04
21	GO:0004185: serine-type carboxypeptidase activity	9.07E-04
22	GO:0016757: transferase activity, transferring glycosyl groups	1.00E-03
23	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.13E-03
24	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.13E-03
25	GO:0003999: adenine phosphoribosyltransferase activity	1.13E-03
26	GO:0005460: UDP-glucose transmembrane transporter activity	1.13E-03
27	GO:0004550: nucleoside diphosphate kinase activity	1.13E-03
28	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.20E-03
29	GO:0010328: auxin influx transmembrane transporter activity	1.50E-03
30	GO:0015204: urea transmembrane transporter activity	1.50E-03
31	GO:0030599: pectinesterase activity	1.90E-03
32	GO:0005459: UDP-galactose transmembrane transporter activity	1.91E-03
33	GO:0019901: protein kinase binding	2.06E-03
34	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.35E-03
35	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.35E-03
36	GO:0042578: phosphoric ester hydrolase activity	2.35E-03
37	GO:0016758: transferase activity, transferring hexosyl groups	2.63E-03
38	GO:0016759: cellulose synthase activity	2.66E-03
39	GO:0051753: mannan synthase activity	2.83E-03
40	GO:0015250: water channel activity	3.17E-03
41	GO:0004564: beta-fructofuranosidase activity	3.86E-03
42	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.42E-03
43	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.00E-03
44	GO:0004575: sucrose alpha-glucosidase activity	5.62E-03
45	GO:0004860: protein kinase inhibitor activity	6.91E-03
46	GO:0004089: carbonate dehydratase activity	8.30E-03
47	GO:0005262: calcium channel activity	8.30E-03
48	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.03E-03
49	GO:0045330: aspartyl esterase activity	1.01E-02
50	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.06E-02
51	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.06E-02
52	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.06E-02
53	GO:0003714: transcription corepressor activity	1.14E-02
54	GO:0004650: polygalacturonase activity	1.18E-02
55	GO:0022857: transmembrane transporter activity	1.22E-02
56	GO:0008514: organic anion transmembrane transporter activity	1.57E-02
57	GO:0004872: receptor activity	2.05E-02
58	GO:0051015: actin filament binding	2.36E-02
59	GO:0000156: phosphorelay response regulator activity	2.36E-02
60	GO:0016791: phosphatase activity	2.46E-02
61	GO:0008483: transaminase activity	2.57E-02
62	GO:0005200: structural constituent of cytoskeleton	2.57E-02
63	GO:0042802: identical protein binding	2.85E-02
64	GO:0046982: protein heterodimerization activity	3.41E-02
65	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.62E-02
66	GO:0003993: acid phosphatase activity	4.12E-02
67	GO:0004672: protein kinase activity	4.22E-02
68	GO:0051539: 4 iron, 4 sulfur cluster binding	4.38E-02
69	GO:0004364: glutathione transferase activity	4.65E-02
70	GO:0005507: copper ion binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	5.94E-11
2	GO:0009505: plant-type cell wall	1.46E-08
3	GO:0048046: apoplast	1.88E-08
4	GO:0046658: anchored component of plasma membrane	9.79E-08
5	GO:0005618: cell wall	2.35E-07
6	GO:0005576: extracellular region	1.21E-06
7	GO:0005794: Golgi apparatus	2.36E-05
8	GO:0009506: plasmodesma	1.65E-04
9	GO:0000139: Golgi membrane	3.12E-04
10	GO:0005886: plasma membrane	3.62E-04
11	GO:0042170: plastid membrane	4.86E-04
12	GO:0016021: integral component of membrane	5.07E-04
13	GO:0005775: vacuolar lumen	1.13E-03
14	GO:0005960: glycine cleavage complex	1.13E-03
15	GO:0042807: central vacuole	3.33E-03
16	GO:0016020: membrane	3.49E-03
17	GO:0000326: protein storage vacuole	4.42E-03
18	GO:0000786: nucleosome	4.99E-03
19	GO:0045298: tubulin complex	5.00E-03
20	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.00E-03
21	GO:0055028: cortical microtubule	6.25E-03
22	GO:0048471: perinuclear region of cytoplasm	6.91E-03
23	GO:0005773: vacuole	8.29E-03
24	GO:0030095: chloroplast photosystem II	9.03E-03
25	GO:0030176: integral component of endoplasmic reticulum membrane	9.79E-03
26	GO:0005758: mitochondrial intermembrane space	1.14E-02
27	GO:0009654: photosystem II oxygen evolving complex	1.22E-02
28	GO:0005789: endoplasmic reticulum membrane	1.50E-02
29	GO:0009543: chloroplast thylakoid lumen	1.62E-02
30	GO:0019898: extrinsic component of membrane	2.05E-02
31	GO:0005887: integral component of plasma membrane	2.27E-02
32	GO:0005615: extracellular space	2.51E-02
33	GO:0030529: intracellular ribonucleoprotein complex	2.79E-02
34	GO:0000325: plant-type vacuole	3.74E-02
35	GO:0009534: chloroplast thylakoid	4.00E-02
36	GO:0031902: late endosome membrane	4.51E-02