GO Enrichment Analysis of Co-expressed Genes with
AT3G13460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 2 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 3 | GO:0006987: activation of signaling protein activity involved in unfolded protein response | 0.00E+00 |
| 4 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 5 | GO:0016236: macroautophagy | 0.00E+00 |
| 6 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 7 | GO:0030242: pexophagy | 6.58E-05 |
| 8 | GO:0019673: GDP-mannose metabolic process | 6.58E-05 |
| 9 | GO:0031338: regulation of vesicle fusion | 6.58E-05 |
| 10 | GO:0090421: embryonic meristem initiation | 6.58E-05 |
| 11 | GO:0050684: regulation of mRNA processing | 1.59E-04 |
| 12 | GO:0007584: response to nutrient | 1.59E-04 |
| 13 | GO:0034398: telomere tethering at nuclear periphery | 1.59E-04 |
| 14 | GO:0019395: fatty acid oxidation | 1.59E-04 |
| 15 | GO:0032784: regulation of DNA-templated transcription, elongation | 2.69E-04 |
| 16 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 2.69E-04 |
| 17 | GO:0090630: activation of GTPase activity | 2.69E-04 |
| 18 | GO:0006397: mRNA processing | 3.03E-04 |
| 19 | GO:0051028: mRNA transport | 3.17E-04 |
| 20 | GO:0019048: modulation by virus of host morphology or physiology | 3.90E-04 |
| 21 | GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 3.90E-04 |
| 22 | GO:0006623: protein targeting to vacuole | 4.26E-04 |
| 23 | GO:0033320: UDP-D-xylose biosynthetic process | 5.20E-04 |
| 24 | GO:0010107: potassium ion import | 5.20E-04 |
| 25 | GO:0045324: late endosome to vacuole transport | 5.20E-04 |
| 26 | GO:0006542: glutamine biosynthetic process | 5.20E-04 |
| 27 | GO:0034052: positive regulation of plant-type hypersensitive response | 6.60E-04 |
| 28 | GO:0009816: defense response to bacterium, incompatible interaction | 6.87E-04 |
| 29 | GO:0042732: D-xylose metabolic process | 8.06E-04 |
| 30 | GO:0042176: regulation of protein catabolic process | 8.06E-04 |
| 31 | GO:0006751: glutathione catabolic process | 8.06E-04 |
| 32 | GO:0033962: cytoplasmic mRNA processing body assembly | 9.59E-04 |
| 33 | GO:0048280: vesicle fusion with Golgi apparatus | 9.59E-04 |
| 34 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.12E-03 |
| 35 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.12E-03 |
| 36 | GO:0046777: protein autophosphorylation | 1.28E-03 |
| 37 | GO:0006491: N-glycan processing | 1.29E-03 |
| 38 | GO:0006875: cellular metal ion homeostasis | 1.29E-03 |
| 39 | GO:0006605: protein targeting | 1.29E-03 |
| 40 | GO:0019375: galactolipid biosynthetic process | 1.29E-03 |
| 41 | GO:0000209: protein polyubiquitination | 1.39E-03 |
| 42 | GO:0009880: embryonic pattern specification | 1.47E-03 |
| 43 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.47E-03 |
| 44 | GO:0006972: hyperosmotic response | 1.47E-03 |
| 45 | GO:0006886: intracellular protein transport | 1.53E-03 |
| 46 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.61E-03 |
| 47 | GO:0001708: cell fate specification | 1.65E-03 |
| 48 | GO:0043067: regulation of programmed cell death | 1.85E-03 |
| 49 | GO:0006896: Golgi to vacuole transport | 2.05E-03 |
| 50 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 2.05E-03 |
| 51 | GO:0043069: negative regulation of programmed cell death | 2.05E-03 |
| 52 | GO:0030148: sphingolipid biosynthetic process | 2.26E-03 |
| 53 | GO:0045037: protein import into chloroplast stroma | 2.48E-03 |
| 54 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 2.48E-03 |
| 55 | GO:0018105: peptidyl-serine phosphorylation | 2.60E-03 |
| 56 | GO:0006829: zinc II ion transport | 2.70E-03 |
| 57 | GO:0055046: microgametogenesis | 2.70E-03 |
| 58 | GO:0009225: nucleotide-sugar metabolic process | 3.16E-03 |
| 59 | GO:0000162: tryptophan biosynthetic process | 3.40E-03 |
| 60 | GO:0006406: mRNA export from nucleus | 3.65E-03 |
| 61 | GO:0009695: jasmonic acid biosynthetic process | 3.90E-03 |
| 62 | GO:0031408: oxylipin biosynthetic process | 4.17E-03 |
| 63 | GO:0035556: intracellular signal transduction | 4.23E-03 |
| 64 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.85E-03 |
| 65 | GO:0009561: megagametogenesis | 4.98E-03 |
| 66 | GO:0009306: protein secretion | 4.98E-03 |
| 67 | GO:0008380: RNA splicing | 5.17E-03 |
| 68 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 5.26E-03 |
| 69 | GO:0042147: retrograde transport, endosome to Golgi | 5.26E-03 |
| 70 | GO:0010501: RNA secondary structure unwinding | 5.55E-03 |
| 71 | GO:0010118: stomatal movement | 5.55E-03 |
| 72 | GO:0006606: protein import into nucleus | 5.55E-03 |
| 73 | GO:0008654: phospholipid biosynthetic process | 6.45E-03 |
| 74 | GO:0006891: intra-Golgi vesicle-mediated transport | 6.76E-03 |
| 75 | GO:0006635: fatty acid beta-oxidation | 6.76E-03 |
| 76 | GO:0016032: viral process | 7.08E-03 |
| 77 | GO:0032502: developmental process | 7.08E-03 |
| 78 | GO:0009630: gravitropism | 7.08E-03 |
| 79 | GO:0006904: vesicle docking involved in exocytosis | 8.06E-03 |
| 80 | GO:0016579: protein deubiquitination | 8.40E-03 |
| 81 | GO:0042128: nitrate assimilation | 9.44E-03 |
| 82 | GO:0006888: ER to Golgi vesicle-mediated transport | 9.79E-03 |
| 83 | GO:0016049: cell growth | 1.02E-02 |
| 84 | GO:0008219: cell death | 1.05E-02 |
| 85 | GO:0006869: lipid transport | 1.09E-02 |
| 86 | GO:0009910: negative regulation of flower development | 1.17E-02 |
| 87 | GO:0030001: metal ion transport | 1.36E-02 |
| 88 | GO:0006468: protein phosphorylation | 1.40E-02 |
| 89 | GO:0006897: endocytosis | 1.40E-02 |
| 90 | GO:0009846: pollen germination | 1.75E-02 |
| 91 | GO:0006486: protein glycosylation | 1.84E-02 |
| 92 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.88E-02 |
| 93 | GO:0006417: regulation of translation | 1.98E-02 |
| 94 | GO:0006096: glycolytic process | 2.07E-02 |
| 95 | GO:0009626: plant-type hypersensitive response | 2.17E-02 |
| 96 | GO:0051726: regulation of cell cycle | 2.46E-02 |
| 97 | GO:0009742: brassinosteroid mediated signaling pathway | 2.46E-02 |
| 98 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.97E-02 |
| 99 | GO:0006633: fatty acid biosynthetic process | 3.26E-02 |
| 100 | GO:0016036: cellular response to phosphate starvation | 3.32E-02 |
| 101 | GO:0006508: proteolysis | 3.96E-02 |
| 102 | GO:0009826: unidimensional cell growth | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003827: alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.00E+00 |
| 2 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 3 | GO:0016262: protein N-acetylglucosaminyltransferase activity | 6.58E-05 |
| 4 | GO:0008446: GDP-mannose 4,6-dehydratase activity | 6.58E-05 |
| 5 | GO:0005524: ATP binding | 8.05E-05 |
| 6 | GO:0003988: acetyl-CoA C-acyltransferase activity | 1.59E-04 |
| 7 | GO:0004180: carboxypeptidase activity | 2.69E-04 |
| 8 | GO:0005047: signal recognition particle binding | 2.69E-04 |
| 9 | GO:0019003: GDP binding | 2.69E-04 |
| 10 | GO:0004758: serine C-palmitoyltransferase activity | 2.69E-04 |
| 11 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.90E-04 |
| 12 | GO:0004834: tryptophan synthase activity | 5.20E-04 |
| 13 | GO:0017137: Rab GTPase binding | 6.60E-04 |
| 14 | GO:0004356: glutamate-ammonia ligase activity | 6.60E-04 |
| 15 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.24E-04 |
| 16 | GO:0004683: calmodulin-dependent protein kinase activity | 7.62E-04 |
| 17 | GO:0048040: UDP-glucuronate decarboxylase activity | 8.06E-04 |
| 18 | GO:0004222: metalloendopeptidase activity | 9.21E-04 |
| 19 | GO:0070403: NAD+ binding | 9.59E-04 |
| 20 | GO:0008195: phosphatidate phosphatase activity | 9.59E-04 |
| 21 | GO:0003730: mRNA 3'-UTR binding | 9.59E-04 |
| 22 | GO:0017056: structural constituent of nuclear pore | 1.29E-03 |
| 23 | GO:0015288: porin activity | 1.29E-03 |
| 24 | GO:0003724: RNA helicase activity | 1.47E-03 |
| 25 | GO:0005267: potassium channel activity | 1.47E-03 |
| 26 | GO:0005487: nucleocytoplasmic transporter activity | 1.85E-03 |
| 27 | GO:0030234: enzyme regulator activity | 2.05E-03 |
| 28 | GO:0004521: endoribonuclease activity | 2.48E-03 |
| 29 | GO:0008139: nuclear localization sequence binding | 2.70E-03 |
| 30 | GO:0016491: oxidoreductase activity | 3.02E-03 |
| 31 | GO:0008565: protein transporter activity | 3.77E-03 |
| 32 | GO:0043424: protein histidine kinase binding | 3.90E-03 |
| 33 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 4.17E-03 |
| 34 | GO:0004176: ATP-dependent peptidase activity | 4.17E-03 |
| 35 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 4.17E-03 |
| 36 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 5.50E-03 |
| 37 | GO:0046873: metal ion transmembrane transporter activity | 5.85E-03 |
| 38 | GO:0005507: copper ion binding | 6.18E-03 |
| 39 | GO:0004674: protein serine/threonine kinase activity | 6.42E-03 |
| 40 | GO:0004872: receptor activity | 6.45E-03 |
| 41 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 6.76E-03 |
| 42 | GO:0005525: GTP binding | 7.42E-03 |
| 43 | GO:0050660: flavin adenine dinucleotide binding | 7.74E-03 |
| 44 | GO:0008237: metallopeptidase activity | 8.06E-03 |
| 45 | GO:0005509: calcium ion binding | 8.72E-03 |
| 46 | GO:0061630: ubiquitin protein ligase activity | 8.73E-03 |
| 47 | GO:0008375: acetylglucosaminyltransferase activity | 9.44E-03 |
| 48 | GO:0004004: ATP-dependent RNA helicase activity | 9.79E-03 |
| 49 | GO:0008236: serine-type peptidase activity | 1.02E-02 |
| 50 | GO:0005096: GTPase activator activity | 1.09E-02 |
| 51 | GO:0003924: GTPase activity | 1.23E-02 |
| 52 | GO:0003746: translation elongation factor activity | 1.24E-02 |
| 53 | GO:0009055: electron carrier activity | 1.32E-02 |
| 54 | GO:0000149: SNARE binding | 1.32E-02 |
| 55 | GO:0005484: SNAP receptor activity | 1.49E-02 |
| 56 | GO:0016887: ATPase activity | 1.91E-02 |
| 57 | GO:0015171: amino acid transmembrane transporter activity | 1.98E-02 |
| 58 | GO:0016746: transferase activity, transferring acyl groups | 2.41E-02 |
| 59 | GO:0008026: ATP-dependent helicase activity | 2.46E-02 |
| 60 | GO:0004386: helicase activity | 2.51E-02 |
| 61 | GO:0030170: pyridoxal phosphate binding | 2.99E-02 |
| 62 | GO:0005516: calmodulin binding | 3.29E-02 |
| 63 | GO:0005515: protein binding | 4.11E-02 |
| 64 | GO:0005215: transporter activity | 4.86E-02 |
| 65 | GO:0003682: chromatin binding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 2 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 3 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 6.58E-05 |
| 4 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 6.58E-05 |
| 5 | GO:0045254: pyruvate dehydrogenase complex | 1.59E-04 |
| 6 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 2.69E-04 |
| 7 | GO:0044614: nuclear pore cytoplasmic filaments | 2.69E-04 |
| 8 | GO:0005770: late endosome | 3.70E-04 |
| 9 | GO:0030140: trans-Golgi network transport vesicle | 8.06E-04 |
| 10 | GO:0005774: vacuolar membrane | 8.92E-04 |
| 11 | GO:0005783: endoplasmic reticulum | 1.03E-03 |
| 12 | GO:0031902: late endosome membrane | 1.24E-03 |
| 13 | GO:0030131: clathrin adaptor complex | 1.29E-03 |
| 14 | GO:0012507: ER to Golgi transport vesicle membrane | 1.29E-03 |
| 15 | GO:0009514: glyoxysome | 1.47E-03 |
| 16 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.47E-03 |
| 17 | GO:0010494: cytoplasmic stress granule | 1.65E-03 |
| 18 | GO:0016604: nuclear body | 1.85E-03 |
| 19 | GO:0030125: clathrin vesicle coat | 2.05E-03 |
| 20 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.26E-03 |
| 21 | GO:0016021: integral component of membrane | 2.67E-03 |
| 22 | GO:0005794: Golgi apparatus | 2.75E-03 |
| 23 | GO:0005750: mitochondrial respiratory chain complex III | 2.93E-03 |
| 24 | GO:0005829: cytosol | 3.26E-03 |
| 25 | GO:0005759: mitochondrial matrix | 3.95E-03 |
| 26 | GO:0005905: clathrin-coated pit | 4.17E-03 |
| 27 | GO:0016020: membrane | 6.10E-03 |
| 28 | GO:0031965: nuclear membrane | 6.45E-03 |
| 29 | GO:0005802: trans-Golgi network | 7.18E-03 |
| 30 | GO:0032580: Golgi cisterna membrane | 7.73E-03 |
| 31 | GO:0000932: P-body | 8.74E-03 |
| 32 | GO:0005643: nuclear pore | 1.05E-02 |
| 33 | GO:0000325: plant-type vacuole | 1.17E-02 |
| 34 | GO:0015934: large ribosomal subunit | 1.17E-02 |
| 35 | GO:0031201: SNARE complex | 1.40E-02 |
| 36 | GO:0000139: Golgi membrane | 1.42E-02 |
| 37 | GO:0005789: endoplasmic reticulum membrane | 1.66E-02 |
| 38 | GO:0000502: proteasome complex | 1.84E-02 |
| 39 | GO:0005635: nuclear envelope | 1.93E-02 |
| 40 | GO:0005681: spliceosomal complex | 2.07E-02 |
| 41 | GO:0012505: endomembrane system | 2.31E-02 |
| 42 | GO:0009706: chloroplast inner membrane | 2.36E-02 |
| 43 | GO:0005773: vacuole | 2.47E-02 |
| 44 | GO:0005623: cell | 2.82E-02 |
| 45 | GO:0005622: intracellular | 3.87E-02 |
| 46 | GO:0005768: endosome | 3.97E-02 |