GO Enrichment Analysis of Co-expressed Genes with
AT3G13420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009664: plant-type cell wall organization | 1.18E-07 |
| 2 | GO:0046274: lignin catabolic process | 9.94E-05 |
| 3 | GO:0045487: gibberellin catabolic process | 6.19E-04 |
| 4 | GO:0060918: auxin transport | 7.57E-04 |
| 5 | GO:0010161: red light signaling pathway | 1.05E-03 |
| 6 | GO:0071669: plant-type cell wall organization or biogenesis | 1.05E-03 |
| 7 | GO:0006298: mismatch repair | 1.92E-03 |
| 8 | GO:0051026: chiasma assembly | 1.92E-03 |
| 9 | GO:0030154: cell differentiation | 1.94E-03 |
| 10 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.32E-03 |
| 11 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.40E-03 |
| 12 | GO:0051726: regulation of cell cycle | 2.43E-03 |
| 13 | GO:0009901: anther dehiscence | 2.96E-03 |
| 14 | GO:0046688: response to copper ion | 2.96E-03 |
| 15 | GO:0007131: reciprocal meiotic recombination | 4.15E-03 |
| 16 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.40E-03 |
| 17 | GO:0009686: gibberellin biosynthetic process | 4.40E-03 |
| 18 | GO:0010468: regulation of gene expression | 4.68E-03 |
| 19 | GO:0010051: xylem and phloem pattern formation | 5.19E-03 |
| 20 | GO:0000271: polysaccharide biosynthetic process | 5.19E-03 |
| 21 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 5.62E-03 |
| 22 | GO:0042752: regulation of circadian rhythm | 5.74E-03 |
| 23 | GO:0048544: recognition of pollen | 5.74E-03 |
| 24 | GO:0009828: plant-type cell wall loosening | 7.21E-03 |
| 25 | GO:0030244: cellulose biosynthetic process | 9.82E-03 |
| 26 | GO:0048767: root hair elongation | 1.02E-02 |
| 27 | GO:0000160: phosphorelay signal transduction system | 1.02E-02 |
| 28 | GO:0009832: plant-type cell wall biogenesis | 1.02E-02 |
| 29 | GO:0009834: plant-type secondary cell wall biogenesis | 1.05E-02 |
| 30 | GO:0010114: response to red light | 1.39E-02 |
| 31 | GO:0009846: pollen germination | 1.63E-02 |
| 32 | GO:0009736: cytokinin-activated signaling pathway | 1.71E-02 |
| 33 | GO:0000398: mRNA splicing, via spliceosome | 2.44E-02 |
| 34 | GO:0007623: circadian rhythm | 3.25E-02 |
| 35 | GO:0009739: response to gibberellin | 3.52E-02 |
| 36 | GO:0009826: unidimensional cell growth | 4.31E-02 |
| 37 | GO:0007049: cell cycle | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005199: structural constituent of cell wall | 1.47E-07 |
| 2 | GO:0052716: hydroquinone:oxygen oxidoreductase activity | 8.59E-05 |
| 3 | GO:0004338: glucan exo-1,3-beta-glucosidase activity | 1.48E-04 |
| 4 | GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity | 3.65E-04 |
| 5 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 4.88E-04 |
| 6 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.29E-04 |
| 7 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 8.40E-04 |
| 8 | GO:0051753: mannan synthase activity | 9.01E-04 |
| 9 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.30E-03 |
| 10 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 1.38E-03 |
| 11 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.48E-03 |
| 12 | GO:0004565: beta-galactosidase activity | 2.52E-03 |
| 13 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.74E-03 |
| 14 | GO:0004707: MAP kinase activity | 3.89E-03 |
| 15 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.40E-03 |
| 16 | GO:0046982: protein heterodimerization activity | 5.95E-03 |
| 17 | GO:0000156: phosphorelay response regulator activity | 6.91E-03 |
| 18 | GO:0016759: cellulose synthase activity | 7.21E-03 |
| 19 | GO:0003684: damaged DNA binding | 7.21E-03 |
| 20 | GO:0044212: transcription regulatory region DNA binding | 8.51E-03 |
| 21 | GO:0030247: polysaccharide binding | 9.14E-03 |
| 22 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 9.47E-03 |
| 23 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.20E-02 |
| 24 | GO:0003777: microtubule motor activity | 1.84E-02 |
| 25 | GO:0043565: sequence-specific DNA binding | 2.01E-02 |
| 26 | GO:0030246: carbohydrate binding | 2.66E-02 |
| 27 | GO:0005507: copper ion binding | 2.82E-02 |
| 28 | GO:0008017: microtubule binding | 3.36E-02 |
| 29 | GO:0016301: kinase activity | 4.35E-02 |
| 30 | GO:0043531: ADP binding | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070985: TFIIK complex | 1.48E-04 |
| 2 | GO:0009530: primary cell wall | 2.51E-04 |
| 3 | GO:0000794: condensed nuclear chromosome | 1.05E-03 |
| 4 | GO:0000786: nucleosome | 1.12E-02 |
| 5 | GO:0031225: anchored component of membrane | 3.09E-02 |
| 6 | GO:0046658: anchored component of plasma membrane | 3.97E-02 |
| 7 | GO:0048046: apoplast | 4.31E-02 |