co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G12320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010243: response to organonitrogen compound	0.00E+00
2	GO:0007623: circadian rhythm	7.21E-09
3	GO:0009723: response to ethylene	2.02E-06
4	GO:0050801: ion homeostasis	1.30E-05
5	GO:0043496: regulation of protein homodimerization activity	3.42E-05
6	GO:0042754: negative regulation of circadian rhythm	3.42E-05
7	GO:0050684: regulation of mRNA processing	3.42E-05
8	GO:0045165: cell fate commitment	6.16E-05
9	GO:0010447: response to acidic pH	6.16E-05
10	GO:0009072: aromatic amino acid family metabolic process	6.16E-05
11	GO:0006572: tyrosine catabolic process	9.36E-05
12	GO:0015846: polyamine transport	1.30E-04
13	GO:0010236: plastoquinone biosynthetic process	1.68E-04
14	GO:0016123: xanthophyll biosynthetic process	1.68E-04
15	GO:0009957: epidermal cell fate specification	1.68E-04
16	GO:0006559: L-phenylalanine catabolic process	2.10E-04
17	GO:0010189: vitamin E biosynthetic process	2.53E-04
18	GO:0000245: spliceosomal complex assembly	2.53E-04
19	GO:2000067: regulation of root morphogenesis	2.53E-04
20	GO:0032880: regulation of protein localization	2.99E-04
21	GO:0010100: negative regulation of photomorphogenesis	3.94E-04
22	GO:0048574: long-day photoperiodism, flowering	3.94E-04
23	GO:0009651: response to salt stress	5.26E-04
24	GO:0009688: abscisic acid biosynthetic process	5.49E-04
25	GO:0009739: response to gibberellin	6.66E-04
26	GO:0009414: response to water deprivation	6.97E-04
27	GO:0018107: peptidyl-threonine phosphorylation	7.14E-04
28	GO:0009266: response to temperature stimulus	7.72E-04
29	GO:0010039: response to iron ion	8.32E-04
30	GO:0010026: trichome differentiation	1.01E-03
31	GO:0009409: response to cold	1.04E-03
32	GO:0003333: amino acid transmembrane transport	1.08E-03
33	GO:0010017: red or far-red light signaling pathway	1.14E-03
34	GO:0006012: galactose metabolic process	1.21E-03
35	GO:0046686: response to cadmium ion	1.24E-03
36	GO:0045892: negative regulation of transcription, DNA-templated	1.34E-03
37	GO:0016117: carotenoid biosynthetic process	1.34E-03
38	GO:0006606: protein import into nucleus	1.41E-03
39	GO:0010182: sugar mediated signaling pathway	1.48E-03
40	GO:0009751: response to salicylic acid	1.59E-03
41	GO:0009408: response to heat	1.61E-03
42	GO:0055072: iron ion homeostasis	1.63E-03
43	GO:0009753: response to jasmonic acid	1.73E-03
44	GO:0009737: response to abscisic acid	1.83E-03
45	GO:0000160: phosphorelay signal transduction system	2.69E-03
46	GO:0035556: intracellular signal transduction	2.98E-03
47	GO:0016051: carbohydrate biosynthetic process	3.05E-03
48	GO:0006351: transcription, DNA-templated	3.10E-03
49	GO:0042542: response to hydrogen peroxide	3.53E-03
50	GO:0010114: response to red light	3.63E-03
51	GO:0009644: response to high light intensity	3.82E-03
52	GO:0055114: oxidation-reduction process	3.84E-03
53	GO:0009809: lignin biosynthetic process	4.44E-03
54	GO:0006979: response to oxidative stress	5.72E-03
55	GO:0018105: peptidyl-serine phosphorylation	5.77E-03
56	GO:0009733: response to auxin	6.37E-03
57	GO:0009790: embryo development	7.35E-03
58	GO:0010468: regulation of gene expression	9.35E-03
59	GO:0006970: response to osmotic stress	1.18E-02
60	GO:0009860: pollen tube growth	1.18E-02
61	GO:0080167: response to karrikin	1.31E-02
62	GO:0010200: response to chitin	1.34E-02
63	GO:0044550: secondary metabolite biosynthetic process	1.39E-02
64	GO:0008152: metabolic process	1.85E-02
65	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.10E-02
66	GO:0006355: regulation of transcription, DNA-templated	2.23E-02
67	GO:0045893: positive regulation of transcription, DNA-templated	2.86E-02
68	GO:0006457: protein folding	3.11E-02
69	GO:0030154: cell differentiation	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
2	GO:0003868: 4-hydroxyphenylpyruvate dioxygenase activity	0.00E+00
3	GO:0019904: protein domain specific binding	6.90E-06
4	GO:0080045: quercetin 3'-O-glucosyltransferase activity	3.42E-05
5	GO:0047216: inositol 3-alpha-galactosyltransferase activity	3.42E-05
6	GO:0015203: polyamine transmembrane transporter activity	9.36E-05
7	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.68E-04
8	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.10E-04
9	GO:0016621: cinnamoyl-CoA reductase activity	2.99E-04
10	GO:0000989: transcription factor activity, transcription factor binding	4.45E-04
11	GO:0071949: FAD binding	4.45E-04
12	GO:0015174: basic amino acid transmembrane transporter activity	4.96E-04
13	GO:0050662: coenzyme binding	1.56E-03
14	GO:0000156: phosphorelay response regulator activity	1.86E-03
15	GO:0015293: symporter activity	3.93E-03
16	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.32E-03
17	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.32E-03
18	GO:0016874: ligase activity	5.43E-03
19	GO:0016758: transferase activity, transferring hexosyl groups	6.48E-03
20	GO:0004252: serine-type endopeptidase activity	7.10E-03
21	GO:0008565: protein transporter activity	7.48E-03
22	GO:0015297: antiporter activity	8.00E-03
23	GO:0008194: UDP-glycosyltransferase activity	8.93E-03
24	GO:0042802: identical protein binding	9.77E-03
25	GO:0005515: protein binding	1.20E-02
26	GO:0003677: DNA binding	1.38E-02
27	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.48E-02
28	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.60E-02
29	GO:0000166: nucleotide binding	2.59E-02
30	GO:0004674: protein serine/threonine kinase activity	2.81E-02
31	GO:0043565: sequence-specific DNA binding	2.92E-02
32	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.50E-02
33	GO:0008270: zinc ion binding	4.16E-02
34	GO:0044212: transcription regulatory region DNA binding	4.29E-02
35	GO:0003824: catalytic activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0048226: Casparian strip	3.46E-04
2	GO:0009535: chloroplast thylakoid membrane	1.95E-03
3	GO:0009706: chloroplast inner membrane	5.66E-03
4	GO:0010287: plastoglobule	6.36E-03
5	GO:0005634: nucleus	6.42E-03
6	GO:0005829: cytosol	1.20E-02
7	GO:0031969: chloroplast membrane	1.31E-02
8	GO:0009507: chloroplast	1.61E-02
9	GO:0043231: intracellular membrane-bounded organelle	1.85E-02
10	GO:0005887: integral component of plasma membrane	2.14E-02
11	GO:0009941: chloroplast envelope	2.68E-02
12	GO:0005622: intracellular	3.90E-02
13	GO:0009536: plastid	4.95E-02