co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G11850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006105: succinate metabolic process	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0010378: temperature compensation of the circadian clock	0.00E+00
4	GO:0019484: beta-alanine catabolic process	0.00E+00
5	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
6	GO:0006020: inositol metabolic process	6.48E-06
7	GO:0009415: response to water	7.49E-05
8	GO:0009737: response to abscisic acid	1.03E-04
9	GO:1990641: response to iron ion starvation	1.20E-04
10	GO:1902265: abscisic acid homeostasis	1.20E-04
11	GO:0009865: pollen tube adhesion	1.20E-04
12	GO:0006540: glutamate decarboxylation to succinate	1.20E-04
13	GO:0032958: inositol phosphate biosynthetic process	1.20E-04
14	GO:0009450: gamma-aminobutyric acid catabolic process	1.20E-04
15	GO:0009409: response to cold	1.54E-04
16	GO:0006101: citrate metabolic process	2.77E-04
17	GO:0010033: response to organic substance	2.77E-04
18	GO:0042542: response to hydrogen peroxide	2.98E-04
19	GO:0009651: response to salt stress	3.57E-04
20	GO:0006278: RNA-dependent DNA biosynthetic process	4.58E-04
21	GO:0042344: indole glucosinolate catabolic process	4.58E-04
22	GO:0006954: inflammatory response	4.58E-04
23	GO:0042256: mature ribosome assembly	4.58E-04
24	GO:0010601: positive regulation of auxin biosynthetic process	6.57E-04
25	GO:0015749: monosaccharide transport	6.57E-04
26	GO:1901332: negative regulation of lateral root development	6.57E-04
27	GO:0006536: glutamate metabolic process	8.72E-04
28	GO:0006646: phosphatidylethanolamine biosynthetic process	8.72E-04
29	GO:0009687: abscisic acid metabolic process	8.72E-04
30	GO:0015743: malate transport	8.72E-04
31	GO:0000380: alternative mRNA splicing, via spliceosome	1.10E-03
32	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.10E-03
33	GO:0043097: pyrimidine nucleoside salvage	1.10E-03
34	GO:0010286: heat acclimation	1.24E-03
35	GO:0006206: pyrimidine nucleobase metabolic process	1.35E-03
36	GO:0000741: karyogamy	1.35E-03
37	GO:0045040: protein import into mitochondrial outer membrane	1.35E-03
38	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.35E-03
39	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.61E-03
40	GO:0007165: signal transduction	1.63E-03
41	GO:0009817: defense response to fungus, incompatible interaction	1.81E-03
42	GO:0048437: floral organ development	1.89E-03
43	GO:0098869: cellular oxidant detoxification	1.89E-03
44	GO:0009631: cold acclimation	2.08E-03
45	GO:0009061: anaerobic respiration	2.19E-03
46	GO:0009819: drought recovery	2.19E-03
47	GO:0006102: isocitrate metabolic process	2.19E-03
48	GO:0001510: RNA methylation	2.50E-03
49	GO:0035556: intracellular signal transduction	2.52E-03
50	GO:0046916: cellular transition metal ion homeostasis	2.82E-03
51	GO:0080167: response to karrikin	3.23E-03
52	GO:0009970: cellular response to sulfate starvation	3.51E-03
53	GO:0006995: cellular response to nitrogen starvation	3.51E-03
54	GO:0055062: phosphate ion homeostasis	3.51E-03
55	GO:0009682: induced systemic resistance	3.88E-03
56	GO:0052544: defense response by callose deposition in cell wall	3.88E-03
57	GO:0006807: nitrogen compound metabolic process	4.64E-03
58	GO:0006626: protein targeting to mitochondrion	4.64E-03
59	GO:0006541: glutamine metabolic process	5.04E-03
60	GO:0005985: sucrose metabolic process	5.46E-03
61	GO:0010030: positive regulation of seed germination	5.46E-03
62	GO:0009269: response to desiccation	7.22E-03
63	GO:0071215: cellular response to abscisic acid stimulus	8.18E-03
64	GO:0009306: protein secretion	8.66E-03
65	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.17E-03
66	GO:0007623: circadian rhythm	9.64E-03
67	GO:0042631: cellular response to water deprivation	9.68E-03
68	GO:0042391: regulation of membrane potential	9.68E-03
69	GO:0080022: primary root development	9.68E-03
70	GO:0000413: protein peptidyl-prolyl isomerization	9.68E-03
71	GO:0010154: fruit development	1.02E-02
72	GO:0006520: cellular amino acid metabolic process	1.02E-02
73	GO:0010197: polar nucleus fusion	1.02E-02
74	GO:0046323: glucose import	1.02E-02
75	GO:0009646: response to absence of light	1.07E-02
76	GO:0048544: recognition of pollen	1.07E-02
77	GO:0042752: regulation of circadian rhythm	1.07E-02
78	GO:0010183: pollen tube guidance	1.13E-02
79	GO:0008654: phospholipid biosynthetic process	1.13E-02
80	GO:0009556: microsporogenesis	1.13E-02
81	GO:0009617: response to bacterium	1.15E-02
82	GO:0046686: response to cadmium ion	1.32E-02
83	GO:0019760: glucosinolate metabolic process	1.36E-02
84	GO:0006904: vesicle docking involved in exocytosis	1.41E-02
85	GO:0001666: response to hypoxia	1.54E-02
86	GO:0010029: regulation of seed germination	1.60E-02
87	GO:0006970: response to osmotic stress	1.61E-02
88	GO:0048573: photoperiodism, flowering	1.72E-02
89	GO:0006950: response to stress	1.72E-02
90	GO:0006811: ion transport	1.99E-02
91	GO:0010218: response to far red light	1.99E-02
92	GO:0044550: secondary metabolite biosynthetic process	2.02E-02
93	GO:0010043: response to zinc ion	2.05E-02
94	GO:0045087: innate immune response	2.19E-02
95	GO:0009637: response to blue light	2.19E-02
96	GO:0006099: tricarboxylic acid cycle	2.26E-02
97	GO:0030001: metal ion transport	2.41E-02
98	GO:0009414: response to water deprivation	2.59E-02
99	GO:0051707: response to other organism	2.63E-02
100	GO:0009926: auxin polar transport	2.63E-02
101	GO:0006979: response to oxidative stress	2.70E-02
102	GO:0008643: carbohydrate transport	2.78E-02
103	GO:0055114: oxidation-reduction process	2.85E-02
104	GO:0006855: drug transmembrane transport	2.93E-02
105	GO:0000165: MAPK cascade	3.01E-02
106	GO:0009585: red, far-red light phototransduction	3.25E-02
107	GO:0051603: proteolysis involved in cellular protein catabolic process	3.33E-02
108	GO:0006857: oligopeptide transport	3.41E-02
109	GO:0048367: shoot system development	3.74E-02
110	GO:0016569: covalent chromatin modification	4.00E-02
111	GO:0009553: embryo sac development	4.09E-02
112	GO:0006396: RNA processing	4.26E-02
113	GO:0009738: abscisic acid-activated signaling pathway	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
4	GO:0000829: inositol heptakisphosphate kinase activity	1.20E-04
5	GO:0010013: N-1-naphthylphthalamic acid binding	1.20E-04
6	GO:0046870: cadmium ion binding	1.20E-04
7	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.20E-04
8	GO:0000828: inositol hexakisphosphate kinase activity	1.20E-04
9	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.20E-04
10	GO:0003867: 4-aminobutyrate transaminase activity	1.20E-04
11	GO:0016274: protein-arginine N-methyltransferase activity	1.20E-04
12	GO:0070006: metalloaminopeptidase activity	1.20E-04
13	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.20E-04
14	GO:0009679: hexose:proton symporter activity	1.20E-04
15	GO:0050897: cobalt ion binding	1.97E-04
16	GO:0003994: aconitate hydratase activity	2.77E-04
17	GO:0004839: ubiquitin activating enzyme activity	2.77E-04
18	GO:0004352: glutamate dehydrogenase (NAD+) activity	2.77E-04
19	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	2.77E-04
20	GO:0032791: lead ion binding	2.77E-04
21	GO:0004609: phosphatidylserine decarboxylase activity	2.77E-04
22	GO:0017150: tRNA dihydrouridine synthase activity	4.58E-04
23	GO:0004096: catalase activity	4.58E-04
24	GO:0048027: mRNA 5'-UTR binding	6.57E-04
25	GO:0005253: anion channel activity	8.72E-04
26	GO:0042277: peptide binding	8.72E-04
27	GO:0004737: pyruvate decarboxylase activity	8.72E-04
28	GO:0010294: abscisic acid glucosyltransferase activity	1.10E-03
29	GO:0015145: monosaccharide transmembrane transporter activity	1.10E-03
30	GO:0008641: small protein activating enzyme activity	1.10E-03
31	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.10E-03
32	GO:0004629: phospholipase C activity	1.35E-03
33	GO:0000293: ferric-chelate reductase activity	1.35E-03
34	GO:0019137: thioglucosidase activity	1.35E-03
35	GO:0030976: thiamine pyrophosphate binding	1.35E-03
36	GO:0070300: phosphatidic acid binding	1.61E-03
37	GO:0004849: uridine kinase activity	1.61E-03
38	GO:0004602: glutathione peroxidase activity	1.61E-03
39	GO:0004435: phosphatidylinositol phospholipase C activity	1.61E-03
40	GO:0016831: carboxy-lyase activity	1.89E-03
41	GO:0015140: malate transmembrane transporter activity	1.89E-03
42	GO:0004525: ribonuclease III activity	2.19E-03
43	GO:0016301: kinase activity	2.57E-03
44	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.82E-03
45	GO:0004177: aminopeptidase activity	3.88E-03
46	GO:0030553: cGMP binding	5.46E-03
47	GO:0030552: cAMP binding	5.46E-03
48	GO:0005509: calcium ion binding	5.99E-03
49	GO:0005216: ion channel activity	6.76E-03
50	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	7.17E-03
51	GO:0004707: MAP kinase activity	7.22E-03
52	GO:0003964: RNA-directed DNA polymerase activity	7.22E-03
53	GO:0005215: transporter activity	7.89E-03
54	GO:0005351: sugar:proton symporter activity	9.42E-03
55	GO:0030551: cyclic nucleotide binding	9.68E-03
56	GO:0005249: voltage-gated potassium channel activity	9.68E-03
57	GO:0004672: protein kinase activity	1.21E-02
58	GO:0102483: scopolin beta-glucosidase activity	1.72E-02
59	GO:0030247: polysaccharide binding	1.72E-02
60	GO:0005507: copper ion binding	1.72E-02
61	GO:0008270: zinc ion binding	1.81E-02
62	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.85E-02
63	GO:0004497: monooxygenase activity	1.86E-02
64	GO:0015238: drug transmembrane transporter activity	1.92E-02
65	GO:0008422: beta-glucosidase activity	2.33E-02
66	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.40E-02
67	GO:0051539: 4 iron, 4 sulfur cluster binding	2.41E-02
68	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.93E-02
69	GO:0031625: ubiquitin protein ligase binding	3.49E-02
70	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.91E-02
71	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.91E-02
72	GO:0004842: ubiquitin-protein transferase activity	3.99E-02
73	GO:0016874: ligase activity	4.00E-02
74	GO:0020037: heme binding	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	4.60E-06
2	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	2.77E-04
3	GO:0005777: peroxisome	6.09E-04
4	GO:0009705: plant-type vacuole membrane	1.42E-03
5	GO:0005742: mitochondrial outer membrane translocase complex	2.50E-03
6	GO:0031090: organelle membrane	2.82E-03
7	GO:0016021: integral component of membrane	4.38E-03
8	GO:0016020: membrane	5.87E-03
9	GO:0005783: endoplasmic reticulum	6.15E-03
10	GO:0005741: mitochondrial outer membrane	7.22E-03
11	GO:0005744: mitochondrial inner membrane presequence translocase complex	8.66E-03
12	GO:0031965: nuclear membrane	1.13E-02
13	GO:0005829: cytosol	1.68E-02
14	GO:0000786: nucleosome	2.12E-02
15	GO:0031966: mitochondrial membrane	3.09E-02
16	GO:0048046: apoplast	4.61E-02
17	GO:0005654: nucleoplasm	4.80E-02