GO Enrichment Analysis of Co-expressed Genes with
AT3G11620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 2 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 3 | GO:0010028: xanthophyll cycle | 3.50E-05 |
| 4 | GO:0019253: reductive pentose-phosphate cycle | 5.08E-05 |
| 5 | GO:0010581: regulation of starch biosynthetic process | 1.52E-04 |
| 6 | GO:0046902: regulation of mitochondrial membrane permeability | 2.25E-04 |
| 7 | GO:0016556: mRNA modification | 2.25E-04 |
| 8 | GO:0033014: tetrapyrrole biosynthetic process | 2.25E-04 |
| 9 | GO:2001141: regulation of RNA biosynthetic process | 2.25E-04 |
| 10 | GO:0015976: carbon utilization | 3.05E-04 |
| 11 | GO:0006085: acetyl-CoA biosynthetic process | 3.05E-04 |
| 12 | GO:0016554: cytidine to uridine editing | 4.78E-04 |
| 13 | GO:0010190: cytochrome b6f complex assembly | 4.78E-04 |
| 14 | GO:0009704: de-etiolation | 7.68E-04 |
| 15 | GO:0019430: removal of superoxide radicals | 8.71E-04 |
| 16 | GO:0071482: cellular response to light stimulus | 8.71E-04 |
| 17 | GO:0006096: glycolytic process | 9.63E-04 |
| 18 | GO:0006783: heme biosynthetic process | 9.78E-04 |
| 19 | GO:0098656: anion transmembrane transport | 9.78E-04 |
| 20 | GO:0009051: pentose-phosphate shunt, oxidative branch | 9.78E-04 |
| 21 | GO:1900865: chloroplast RNA modification | 1.09E-03 |
| 22 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.09E-03 |
| 23 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.09E-03 |
| 24 | GO:0006535: cysteine biosynthetic process from serine | 1.20E-03 |
| 25 | GO:0043085: positive regulation of catalytic activity | 1.32E-03 |
| 26 | GO:0006352: DNA-templated transcription, initiation | 1.32E-03 |
| 27 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.32E-03 |
| 28 | GO:0009767: photosynthetic electron transport chain | 1.57E-03 |
| 29 | GO:0019344: cysteine biosynthetic process | 2.12E-03 |
| 30 | GO:0080092: regulation of pollen tube growth | 2.56E-03 |
| 31 | GO:0016117: carotenoid biosynthetic process | 3.03E-03 |
| 32 | GO:0080167: response to karrikin | 3.70E-03 |
| 33 | GO:0048364: root development | 5.67E-03 |
| 34 | GO:0046686: response to cadmium ion | 5.99E-03 |
| 35 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.06E-02 |
| 36 | GO:0006417: regulation of translation | 1.11E-02 |
| 37 | GO:0048316: seed development | 1.19E-02 |
| 38 | GO:0048367: shoot system development | 1.19E-02 |
| 39 | GO:0042744: hydrogen peroxide catabolic process | 1.71E-02 |
| 40 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 2.53E-02 |
| 41 | GO:0009658: chloroplast organization | 2.67E-02 |
| 42 | GO:0006810: transport | 2.88E-02 |
| 43 | GO:0045454: cell redox homeostasis | 3.54E-02 |
| 44 | GO:0032259: methylation | 3.98E-02 |
| 45 | GO:0006629: lipid metabolic process | 4.11E-02 |
| 46 | GO:0008152: metabolic process | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 2 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 3 | GO:0004618: phosphoglycerate kinase activity | 8.18E-08 |
| 4 | GO:0004325: ferrochelatase activity | 3.50E-05 |
| 5 | GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | 3.50E-05 |
| 6 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 3.50E-05 |
| 7 | GO:0005528: FK506 binding | 7.44E-05 |
| 8 | GO:0050017: L-3-cyanoalanine synthase activity | 8.78E-05 |
| 9 | GO:0004324: ferredoxin-NADP+ reductase activity | 1.52E-04 |
| 10 | GO:0017057: 6-phosphogluconolactonase activity | 2.25E-04 |
| 11 | GO:0003878: ATP citrate synthase activity | 2.25E-04 |
| 12 | GO:0016987: sigma factor activity | 3.05E-04 |
| 13 | GO:0001053: plastid sigma factor activity | 3.05E-04 |
| 14 | GO:0003959: NADPH dehydrogenase activity | 3.89E-04 |
| 15 | GO:0005471: ATP:ADP antiporter activity | 3.89E-04 |
| 16 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 5.70E-04 |
| 17 | GO:0004124: cysteine synthase activity | 5.70E-04 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.17E-04 |
| 19 | GO:0008047: enzyme activator activity | 1.20E-03 |
| 20 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.32E-03 |
| 21 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.57E-03 |
| 22 | GO:0004089: carbonate dehydratase activity | 1.57E-03 |
| 23 | GO:0031072: heat shock protein binding | 1.57E-03 |
| 24 | GO:0008266: poly(U) RNA binding | 1.70E-03 |
| 25 | GO:0003756: protein disulfide isomerase activity | 2.87E-03 |
| 26 | GO:0008514: organic anion transmembrane transporter activity | 2.87E-03 |
| 27 | GO:0008080: N-acetyltransferase activity | 3.36E-03 |
| 28 | GO:0004791: thioredoxin-disulfide reductase activity | 3.53E-03 |
| 29 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.24E-03 |
| 30 | GO:0016491: oxidoreductase activity | 4.84E-03 |
| 31 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 5.78E-03 |
| 32 | GO:0008236: serine-type peptidase activity | 5.78E-03 |
| 33 | GO:0004519: endonuclease activity | 5.91E-03 |
| 34 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 7.27E-03 |
| 35 | GO:0004185: serine-type carboxypeptidase activity | 8.41E-03 |
| 36 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.04E-02 |
| 37 | GO:0016740: transferase activity | 1.18E-02 |
| 38 | GO:0022857: transmembrane transporter activity | 1.27E-02 |
| 39 | GO:0051082: unfolded protein binding | 1.33E-02 |
| 40 | GO:0016746: transferase activity, transferring acyl groups | 1.36E-02 |
| 41 | GO:0016829: lyase activity | 1.65E-02 |
| 42 | GO:0030170: pyridoxal phosphate binding | 1.68E-02 |
| 43 | GO:0008168: methyltransferase activity | 2.60E-02 |
| 44 | GO:0043531: ADP binding | 2.85E-02 |
| 45 | GO:0016787: hydrolase activity | 4.19E-02 |
| 46 | GO:0003723: RNA binding | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.96E-11 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 1.13E-04 |
| 3 | GO:0009346: citrate lyase complex | 2.25E-04 |
| 4 | GO:0009579: thylakoid | 2.51E-04 |
| 5 | GO:0009941: chloroplast envelope | 3.01E-04 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.73E-04 |
| 7 | GO:0055035: plastid thylakoid membrane | 3.89E-04 |
| 8 | GO:0031977: thylakoid lumen | 5.72E-04 |
| 9 | GO:0009508: plastid chromosome | 1.57E-03 |
| 10 | GO:0009534: chloroplast thylakoid | 1.78E-03 |
| 11 | GO:0031969: chloroplast membrane | 3.70E-03 |
| 12 | GO:0009295: nucleoid | 4.60E-03 |
| 13 | GO:0010319: stromule | 4.60E-03 |
| 14 | GO:0009570: chloroplast stroma | 9.82E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 1.33E-02 |
| 16 | GO:0005743: mitochondrial inner membrane | 3.90E-02 |
| 17 | GO:0043231: intracellular membrane-bounded organelle | 4.41E-02 |