GO Enrichment Analysis of Co-expressed Genes with
AT3G11250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0006412: translation | 2.39E-37 |
| 4 | GO:0042254: ribosome biogenesis | 1.25E-17 |
| 5 | GO:0000027: ribosomal large subunit assembly | 7.39E-13 |
| 6 | GO:0009967: positive regulation of signal transduction | 1.97E-07 |
| 7 | GO:0044205: 'de novo' UMP biosynthetic process | 3.53E-06 |
| 8 | GO:0009735: response to cytokinin | 4.17E-06 |
| 9 | GO:0006364: rRNA processing | 5.08E-06 |
| 10 | GO:0009955: adaxial/abaxial pattern specification | 1.32E-05 |
| 11 | GO:1990542: mitochondrial transmembrane transport | 5.79E-05 |
| 12 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 1.41E-04 |
| 13 | GO:0030150: protein import into mitochondrial matrix | 1.52E-04 |
| 14 | GO:0071215: cellular response to abscisic acid stimulus | 2.26E-04 |
| 15 | GO:0010476: gibberellin mediated signaling pathway | 2.40E-04 |
| 16 | GO:1902626: assembly of large subunit precursor of preribosome | 2.40E-04 |
| 17 | GO:0002181: cytoplasmic translation | 2.40E-04 |
| 18 | GO:0042274: ribosomal small subunit biogenesis | 4.66E-04 |
| 19 | GO:0071493: cellular response to UV-B | 5.92E-04 |
| 20 | GO:0009612: response to mechanical stimulus | 8.63E-04 |
| 21 | GO:0006458: 'de novo' protein folding | 8.63E-04 |
| 22 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.01E-03 |
| 23 | GO:0008283: cell proliferation | 1.14E-03 |
| 24 | GO:0009965: leaf morphogenesis | 1.28E-03 |
| 25 | GO:0001558: regulation of cell growth | 1.32E-03 |
| 26 | GO:0006526: arginine biosynthetic process | 1.32E-03 |
| 27 | GO:0010015: root morphogenesis | 2.02E-03 |
| 28 | GO:0006913: nucleocytoplasmic transport | 2.02E-03 |
| 29 | GO:0006820: anion transport | 2.21E-03 |
| 30 | GO:0010102: lateral root morphogenesis | 2.41E-03 |
| 31 | GO:0006626: protein targeting to mitochondrion | 2.41E-03 |
| 32 | GO:0010229: inflorescence development | 2.41E-03 |
| 33 | GO:0048467: gynoecium development | 2.62E-03 |
| 34 | GO:0009845: seed germination | 2.89E-03 |
| 35 | GO:0016036: cellular response to phosphate starvation | 3.43E-03 |
| 36 | GO:0051302: regulation of cell division | 3.49E-03 |
| 37 | GO:0061077: chaperone-mediated protein folding | 3.72E-03 |
| 38 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.95E-03 |
| 39 | GO:0007005: mitochondrion organization | 3.95E-03 |
| 40 | GO:0040007: growth | 4.20E-03 |
| 41 | GO:0010501: RNA secondary structure unwinding | 4.95E-03 |
| 42 | GO:0006520: cellular amino acid metabolic process | 5.21E-03 |
| 43 | GO:0010197: polar nucleus fusion | 5.21E-03 |
| 44 | GO:0009793: embryo development ending in seed dormancy | 5.48E-03 |
| 45 | GO:0009791: post-embryonic development | 5.75E-03 |
| 46 | GO:0009749: response to glucose | 5.75E-03 |
| 47 | GO:0032502: developmental process | 6.31E-03 |
| 48 | GO:0006950: response to stress | 8.71E-03 |
| 49 | GO:0016049: cell growth | 9.03E-03 |
| 50 | GO:0006811: ion transport | 1.00E-02 |
| 51 | GO:0048527: lateral root development | 1.04E-02 |
| 52 | GO:0010043: response to zinc ion | 1.04E-02 |
| 53 | GO:0009853: photorespiration | 1.11E-02 |
| 54 | GO:0009926: auxin polar transport | 1.32E-02 |
| 55 | GO:0000154: rRNA modification | 1.44E-02 |
| 56 | GO:0009734: auxin-activated signaling pathway | 1.46E-02 |
| 57 | GO:0006417: regulation of translation | 1.75E-02 |
| 58 | GO:0048367: shoot system development | 1.88E-02 |
| 59 | GO:0006457: protein folding | 2.39E-02 |
| 60 | GO:0009451: RNA modification | 3.15E-02 |
| 61 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.20E-02 |
| 62 | GO:0009739: response to gibberellin | 3.35E-02 |
| 63 | GO:0009733: response to auxin | 4.19E-02 |
| 64 | GO:0009723: response to ethylene | 4.68E-02 |
| 65 | GO:0015031: protein transport | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 9.63E-50 |
| 3 | GO:0003729: mRNA binding | 1.50E-14 |
| 4 | GO:0005078: MAP-kinase scaffold activity | 1.97E-07 |
| 5 | GO:0008097: 5S rRNA binding | 1.83E-06 |
| 6 | GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | 5.79E-05 |
| 7 | GO:0016743: carboxyl- or carbamoyltransferase activity | 1.41E-04 |
| 8 | GO:0003723: RNA binding | 2.36E-04 |
| 9 | GO:0070180: large ribosomal subunit rRNA binding | 2.40E-04 |
| 10 | GO:0032947: protein complex scaffold | 2.40E-04 |
| 11 | GO:0017077: oxidative phosphorylation uncoupler activity | 3.49E-04 |
| 12 | GO:0008235: metalloexopeptidase activity | 1.01E-03 |
| 13 | GO:0030515: snoRNA binding | 1.01E-03 |
| 14 | GO:0015288: porin activity | 1.16E-03 |
| 15 | GO:0008308: voltage-gated anion channel activity | 1.32E-03 |
| 16 | GO:0044183: protein binding involved in protein folding | 2.02E-03 |
| 17 | GO:0051082: unfolded protein binding | 2.14E-03 |
| 18 | GO:0000049: tRNA binding | 2.21E-03 |
| 19 | GO:0015266: protein channel activity | 2.41E-03 |
| 20 | GO:0019843: rRNA binding | 2.67E-03 |
| 21 | GO:0000166: nucleotide binding | 3.19E-03 |
| 22 | GO:0004812: aminoacyl-tRNA ligase activity | 4.69E-03 |
| 23 | GO:0016597: amino acid binding | 7.47E-03 |
| 24 | GO:0004721: phosphoprotein phosphatase activity | 8.71E-03 |
| 25 | GO:0004004: ATP-dependent RNA helicase activity | 8.71E-03 |
| 26 | GO:0004871: signal transducer activity | 8.80E-03 |
| 27 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.36E-03 |
| 28 | GO:0003746: translation elongation factor activity | 1.11E-02 |
| 29 | GO:0008026: ATP-dependent helicase activity | 2.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0022626: cytosolic ribosome | 8.16E-43 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 1.08E-34 |
| 4 | GO:0005840: ribosome | 7.96E-29 |
| 5 | GO:0005730: nucleolus | 2.71E-28 |
| 6 | GO:0005829: cytosol | 1.81E-19 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 3.07E-16 |
| 8 | GO:0009506: plasmodesma | 1.33E-12 |
| 9 | GO:0015934: large ribosomal subunit | 2.63E-12 |
| 10 | GO:0005737: cytoplasm | 4.11E-12 |
| 11 | GO:0005773: vacuole | 9.57E-10 |
| 12 | GO:0005774: vacuolar membrane | 1.15E-09 |
| 13 | GO:0016020: membrane | 1.22E-09 |
| 14 | GO:0005618: cell wall | 3.93E-06 |
| 15 | GO:0005951: carbamoyl-phosphate synthase complex | 5.79E-05 |
| 16 | GO:0031428: box C/D snoRNP complex | 7.24E-04 |
| 17 | GO:0005886: plasma membrane | 1.04E-03 |
| 18 | GO:0009507: chloroplast | 1.09E-03 |
| 19 | GO:0046930: pore complex | 1.32E-03 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 1.32E-03 |
| 21 | GO:0005743: mitochondrial inner membrane | 1.41E-03 |
| 22 | GO:0005834: heterotrimeric G-protein complex | 1.90E-03 |
| 23 | GO:0048471: perinuclear region of cytoplasm | 2.02E-03 |
| 24 | GO:0032040: small-subunit processome | 2.21E-03 |
| 25 | GO:0015935: small ribosomal subunit | 3.72E-03 |
| 26 | GO:0005741: mitochondrial outer membrane | 3.72E-03 |
| 27 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.44E-03 |
| 28 | GO:0016592: mediator complex | 6.31E-03 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 7.78E-03 |
| 30 | GO:0005788: endoplasmic reticulum lumen | 8.08E-03 |
| 31 | GO:0005635: nuclear envelope | 1.71E-02 |
| 32 | GO:0005747: mitochondrial respiratory chain complex I | 1.88E-02 |
| 33 | GO:0005783: endoplasmic reticulum | 2.88E-02 |
| 34 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.51E-02 |