Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G10970

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015822: ornithine transport0.00E+00
2GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
3GO:0046686: response to cadmium ion5.24E-06
4GO:0071482: cellular response to light stimulus7.76E-06
5GO:0009853: photorespiration8.99E-06
6GO:0006659: phosphatidylserine biosynthetic process2.41E-05
7GO:0000066: mitochondrial ornithine transport2.41E-05
8GO:1901349: glucosinolate transport2.41E-05
9GO:0090449: phloem glucosinolate loading2.41E-05
10GO:0019253: reductive pentose-phosphate cycle2.92E-05
11GO:0009791: post-embryonic development1.13E-04
12GO:0033014: tetrapyrrole biosynthetic process1.62E-04
13GO:2001141: regulation of RNA biosynthetic process1.62E-04
14GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.62E-04
15GO:0006021: inositol biosynthetic process2.21E-04
16GO:0009902: chloroplast relocation2.21E-04
17GO:0006542: glutamine biosynthetic process2.21E-04
18GO:0019676: ammonia assimilation cycle2.21E-04
19GO:0019464: glycine decarboxylation via glycine cleavage system2.21E-04
20GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.51E-04
21GO:0009854: oxidative photosynthetic carbon pathway4.20E-04
22GO:0006810: transport4.96E-04
23GO:0006096: glycolytic process6.17E-04
24GO:0006783: heme biosynthetic process7.25E-04
25GO:0006779: porphyrin-containing compound biosynthetic process8.07E-04
26GO:0045036: protein targeting to chloroplast8.92E-04
27GO:0006352: DNA-templated transcription, initiation9.78E-04
28GO:0006006: glucose metabolic process1.16E-03
29GO:0009767: photosynthetic electron transport chain1.16E-03
30GO:0042343: indole glucosinolate metabolic process1.35E-03
31GO:0098542: defense response to other organism1.76E-03
32GO:0009658: chloroplast organization1.88E-03
33GO:0080167: response to karrikin2.32E-03
34GO:0042631: cellular response to water deprivation2.33E-03
35GO:0008654: phospholipid biosynthetic process2.70E-03
36GO:0009816: defense response to bacterium, incompatible interaction3.76E-03
37GO:0009817: defense response to fungus, incompatible interaction4.34E-03
38GO:0055114: oxidation-reduction process4.70E-03
39GO:0007568: aging4.80E-03
40GO:0006839: mitochondrial transport5.59E-03
41GO:0009416: response to light stimulus6.02E-03
42GO:0009744: response to sucrose6.08E-03
43GO:0006457: protein folding7.78E-03
44GO:0006857: oligopeptide transport7.84E-03
45GO:0010228: vegetative to reproductive phase transition of meristem1.45E-02
46GO:0044550: secondary metabolite biosynthetic process2.37E-02
47GO:0045454: cell redox homeostasis2.54E-02
48GO:0032259: methylation2.86E-02
49GO:0009735: response to cytokinin4.16E-02
RankGO TermAdjusted P value
1GO:0008465: glycerate dehydrogenase activity0.00E+00
2GO:0050281: serine-glyoxylate transaminase activity0.00E+00
3GO:0004760: serine-pyruvate transaminase activity0.00E+00
4GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
5GO:0090448: glucosinolate:proton symporter activity2.41E-05
6GO:0030941: chloroplast targeting sequence binding2.41E-05
7GO:0004325: ferrochelatase activity2.41E-05
8GO:0004618: phosphoglycerate kinase activity6.16E-05
9GO:0000064: L-ornithine transmembrane transporter activity6.16E-05
10GO:0004512: inositol-3-phosphate synthase activity6.16E-05
11GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity6.16E-05
12GO:0004148: dihydrolipoyl dehydrogenase activity1.09E-04
13GO:0048038: quinone binding1.22E-04
14GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.62E-04
15GO:0004375: glycine dehydrogenase (decarboxylating) activity1.62E-04
16GO:0004301: epoxide hydrolase activity2.21E-04
17GO:0001053: plastid sigma factor activity2.21E-04
18GO:0051861: glycolipid binding2.21E-04
19GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.21E-04
20GO:0008453: alanine-glyoxylate transaminase activity2.21E-04
21GO:0016987: sigma factor activity2.21E-04
22GO:0004356: glutamate-ammonia ligase activity2.84E-04
23GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.20E-04
24GO:0051287: NAD binding4.73E-04
25GO:0008327: methyl-CpG binding9.78E-04
26GO:0031072: heat shock protein binding1.16E-03
27GO:0008266: poly(U) RNA binding1.25E-03
28GO:0003756: protein disulfide isomerase activity2.10E-03
29GO:0004222: metalloendopeptidase activity4.64E-03
30GO:0050897: cobalt ion binding4.80E-03
31GO:0050661: NADP binding5.59E-03
32GO:0016740: transferase activity7.34E-03
33GO:0003899: DNA-directed 5'-3' RNA polymerase activity7.47E-03
34GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups8.59E-03
35GO:0051082: unfolded protein binding9.56E-03
36GO:0016746: transferase activity, transferring acyl groups9.75E-03
37GO:0016491: oxidoreductase activity1.61E-02
38GO:0008168: methyltransferase activity1.86E-02
39GO:0050660: flavin adenine dinucleotide binding2.12E-02
40GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.68E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast7.15E-12
2GO:0009535: chloroplast thylakoid membrane9.62E-07
3GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)9.86E-06
4GO:0009344: nitrite reductase complex [NAD(P)H]2.41E-05
5GO:0005960: glycine cleavage complex1.62E-04
6GO:0009707: chloroplast outer membrane2.39E-04
7GO:0055035: plastid thylakoid membrane2.84E-04
8GO:0048046: apoplast3.72E-04
9GO:0031359: integral component of chloroplast outer membrane4.92E-04
10GO:0009941: chloroplast envelope5.89E-04
11GO:0009579: thylakoid9.76E-04
12GO:0009570: chloroplast stroma1.05E-03
13GO:0009508: plastid chromosome1.16E-03
14GO:0030095: chloroplast photosystem II1.25E-03
15GO:0009654: photosystem II oxygen evolving complex1.65E-03
16GO:0031969: chloroplast membrane2.32E-03
17GO:0019898: extrinsic component of membrane2.70E-03
18GO:0010319: stromule3.35E-03
19GO:0009295: nucleoid3.35E-03
20GO:0005777: peroxisome6.90E-03
21GO:0009534: chloroplast thylakoid7.26E-03
22GO:0005747: mitochondrial respiratory chain complex I8.59E-03
23GO:0009706: chloroplast inner membrane9.56E-03
24GO:0009543: chloroplast thylakoid lumen1.12E-02
25GO:0005623: cell1.14E-02
26GO:0005759: mitochondrial matrix1.31E-02
27GO:0016020: membrane1.38E-02
28GO:0009536: plastid1.50E-02
29GO:0005743: mitochondrial inner membrane2.80E-02
30GO:0022626: cytosolic ribosome4.30E-02
Gene type



Gene DE type