co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G10630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043171: peptide catabolic process	0.00E+00
2	GO:0048867: stem cell fate determination	0.00E+00
3	GO:0000380: alternative mRNA splicing, via spliceosome	3.25E-06
4	GO:0032509: endosome transport via multivesicular body sorting pathway	1.00E-04
5	GO:0030259: lipid glycosylation	1.00E-04
6	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	1.00E-04
7	GO:0001736: establishment of planar polarity	1.00E-04
8	GO:0015914: phospholipid transport	1.00E-04
9	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.73E-04
10	GO:0032012: regulation of ARF protein signal transduction	1.73E-04
11	GO:0016255: attachment of GPI anchor to protein	1.73E-04
12	GO:0045836: positive regulation of meiotic nuclear division	1.73E-04
13	GO:0051601: exocyst localization	2.55E-04
14	GO:0015743: malate transport	3.43E-04
15	GO:0010483: pollen tube reception	3.43E-04
16	GO:1903830: magnesium ion transmembrane transport	3.43E-04
17	GO:0045927: positive regulation of growth	4.37E-04
18	GO:0006656: phosphatidylcholine biosynthetic process	4.37E-04
19	GO:0010043: response to zinc ion	5.28E-04
20	GO:0006751: glutathione catabolic process	5.37E-04
21	GO:0045087: innate immune response	5.76E-04
22	GO:0000911: cytokinesis by cell plate formation	6.40E-04
23	GO:0009942: longitudinal axis specification	6.40E-04
24	GO:0030001: metal ion transport	6.54E-04
25	GO:0015693: magnesium ion transport	7.49E-04
26	GO:0006401: RNA catabolic process	7.49E-04
27	GO:0007155: cell adhesion	8.61E-04
28	GO:0006875: cellular metal ion homeostasis	8.61E-04
29	GO:0032508: DNA duplex unwinding	8.61E-04
30	GO:0009846: pollen germination	9.12E-04
31	GO:0009932: cell tip growth	9.77E-04
32	GO:0009880: embryonic pattern specification	9.77E-04
33	GO:0060321: acceptance of pollen	9.77E-04
34	GO:0001510: RNA methylation	9.77E-04
35	GO:0048507: meristem development	1.10E-03
36	GO:0048765: root hair cell differentiation	1.49E-03
37	GO:0010152: pollen maturation	1.63E-03
38	GO:0006829: zinc II ion transport	1.77E-03
39	GO:0010540: basipetal auxin transport	1.92E-03
40	GO:0034976: response to endoplasmic reticulum stress	2.23E-03
41	GO:0006406: mRNA export from nucleus	2.39E-03
42	GO:0006874: cellular calcium ion homeostasis	2.55E-03
43	GO:0009695: jasmonic acid biosynthetic process	2.55E-03
44	GO:0010073: meristem maintenance	2.55E-03
45	GO:0051321: meiotic cell cycle	2.72E-03
46	GO:0008284: positive regulation of cell proliferation	3.42E-03
47	GO:0009826: unidimensional cell growth	3.44E-03
48	GO:0010501: RNA secondary structure unwinding	3.61E-03
49	GO:0000413: protein peptidyl-prolyl isomerization	3.61E-03
50	GO:0010087: phloem or xylem histogenesis	3.61E-03
51	GO:0048868: pollen tube development	3.80E-03
52	GO:0006635: fatty acid beta-oxidation	4.38E-03
53	GO:0016192: vesicle-mediated transport	4.64E-03
54	GO:0071805: potassium ion transmembrane transport	5.21E-03
55	GO:0009816: defense response to bacterium, incompatible interaction	5.86E-03
56	GO:0009627: systemic acquired resistance	6.09E-03
57	GO:0006950: response to stress	6.31E-03
58	GO:0008219: cell death	6.77E-03
59	GO:0010311: lateral root formation	7.01E-03
60	GO:0009631: cold acclimation	7.49E-03
61	GO:0010119: regulation of stomatal movement	7.49E-03
62	GO:0006887: exocytosis	9.01E-03
63	GO:0006897: endocytosis	9.01E-03
64	GO:0009926: auxin polar transport	9.53E-03
65	GO:0009735: response to cytokinin	1.06E-02
66	GO:0006364: rRNA processing	1.18E-02
67	GO:0006486: protein glycosylation	1.18E-02
68	GO:0006813: potassium ion transport	1.18E-02
69	GO:0006457: protein folding	1.50E-02
70	GO:0009058: biosynthetic process	1.84E-02
71	GO:0009845: seed germination	1.87E-02
72	GO:0006633: fatty acid biosynthetic process	2.08E-02
73	GO:0016036: cellular response to phosphate starvation	2.12E-02
74	GO:0040008: regulation of growth	2.15E-02
75	GO:0007623: circadian rhythm	2.22E-02
76	GO:0010228: vegetative to reproductive phase transition of meristem	2.30E-02
77	GO:0009409: response to cold	3.18E-02
78	GO:0006970: response to osmotic stress	3.20E-02
79	GO:0009860: pollen tube growth	3.20E-02
80	GO:0009723: response to ethylene	3.37E-02
81	GO:0045454: cell redox homeostasis	4.02E-02
82	GO:0006886: intracellular protein transport	4.11E-02
83	GO:0007275: multicellular organism development	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0010292: GTP:GDP antiporter activity	0.00E+00
2	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
3	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
5	GO:0010013: N-1-naphthylphthalamic acid binding	4.04E-05
6	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	4.04E-05
7	GO:0070006: metalloaminopeptidase activity	4.04E-05
8	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.00E-04
9	GO:0003923: GPI-anchor transamidase activity	1.00E-04
10	GO:0000030: mannosyltransferase activity	1.73E-04
11	GO:0019829: cation-transporting ATPase activity	1.73E-04
12	GO:0046873: metal ion transmembrane transporter activity	1.95E-04
13	GO:0004165: dodecenoyl-CoA delta-isomerase activity	2.55E-04
14	GO:0004300: enoyl-CoA hydratase activity	2.55E-04
15	GO:0005086: ARF guanyl-nucleotide exchange factor activity	3.43E-04
16	GO:0008526: phosphatidylinositol transporter activity	3.43E-04
17	GO:0005253: anion channel activity	3.43E-04
18	GO:0042277: peptide binding	3.43E-04
19	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	4.37E-04
20	GO:0015140: malate transmembrane transporter activity	7.49E-04
21	GO:0001104: RNA polymerase II transcription cofactor activity	9.77E-04
22	GO:0003723: RNA binding	1.21E-03
23	GO:0003729: mRNA binding	1.37E-03
24	GO:0004177: aminopeptidase activity	1.49E-03
25	GO:0005388: calcium-transporting ATPase activity	1.77E-03
26	GO:0000175: 3'-5'-exoribonuclease activity	1.77E-03
27	GO:0015095: magnesium ion transmembrane transporter activity	1.77E-03
28	GO:0043424: protein histidine kinase binding	2.55E-03
29	GO:0015079: potassium ion transmembrane transporter activity	2.55E-03
30	GO:0004540: ribonuclease activity	2.72E-03
31	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.72E-03
32	GO:0003756: protein disulfide isomerase activity	3.24E-03
33	GO:0042803: protein homodimerization activity	5.53E-03
34	GO:0003697: single-stranded DNA binding	7.99E-03
35	GO:0000149: SNARE binding	8.49E-03
36	GO:0043621: protein self-association	1.01E-02
37	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.06E-02
38	GO:0003690: double-stranded DNA binding	1.20E-02
39	GO:0016874: ligase activity	1.45E-02
40	GO:0042802: identical protein binding	2.64E-02
41	GO:0008168: methyltransferase activity	2.95E-02
42	GO:0004497: monooxygenase activity	3.54E-02
43	GO:0005515: protein binding	3.98E-02
44	GO:0004722: protein serine/threonine phosphatase activity	4.30E-02
45	GO:0016787: hydrolase activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005783: endoplasmic reticulum	4.04E-05
2	GO:0042765: GPI-anchor transamidase complex	1.73E-04
3	GO:0009506: plasmodesma	2.61E-04
4	GO:0000178: exosome (RNase complex)	4.37E-04
5	GO:0070847: core mediator complex	5.37E-04
6	GO:0010369: chromocenter	6.40E-04
7	GO:0031090: organelle membrane	1.10E-03
8	GO:0005777: peroxisome	2.10E-03
9	GO:0016592: mediator complex	4.58E-03
10	GO:0000145: exocyst	4.58E-03
11	GO:0000932: P-body	5.64E-03
12	GO:0005856: cytoskeleton	1.03E-02
13	GO:0010008: endosome membrane	1.35E-02
14	GO:0005654: nucleoplasm	1.74E-02
15	GO:0009543: chloroplast thylakoid lumen	1.77E-02
16	GO:0009524: phragmoplast	1.84E-02
17	GO:0005802: trans-Golgi network	1.86E-02
18	GO:0005774: vacuolar membrane	2.08E-02
19	GO:0005768: endosome	2.11E-02
20	GO:0009705: plant-type vacuole membrane	2.22E-02
21	GO:0005618: cell wall	2.46E-02
22	GO:0005789: endoplasmic reticulum membrane	3.58E-02
23	GO:0005886: plasma membrane	3.81E-02
24	GO:0005737: cytoplasm	3.83E-02
25	GO:0005730: nucleolus	3.96E-02