GO Enrichment Analysis of Co-expressed Genes with
AT3G10380
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 2 | GO:0016236: macroautophagy | 0.00E+00 |
| 3 | GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly | 0.00E+00 |
| 4 | GO:0035420: MAPK cascade involved in innate immune response | 0.00E+00 |
| 5 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 6 | GO:0010636: positive regulation of mitochondrial fusion | 0.00E+00 |
| 7 | GO:0048312: intracellular distribution of mitochondria | 0.00E+00 |
| 8 | GO:0006886: intracellular protein transport | 7.56E-07 |
| 9 | GO:0000266: mitochondrial fission | 2.30E-05 |
| 10 | GO:0055071: manganese ion homeostasis | 2.53E-05 |
| 11 | GO:2000011: regulation of adaxial/abaxial pattern formation | 2.53E-05 |
| 12 | GO:0030242: pexophagy | 2.53E-05 |
| 13 | GO:0048255: mRNA stabilization | 6.44E-05 |
| 14 | GO:2000071: regulation of defense response by callose deposition | 6.44E-05 |
| 15 | GO:0006611: protein export from nucleus | 6.44E-05 |
| 16 | GO:0072583: clathrin-dependent endocytosis | 1.69E-04 |
| 17 | GO:0080119: ER body organization | 1.69E-04 |
| 18 | GO:0071323: cellular response to chitin | 1.69E-04 |
| 19 | GO:2000114: regulation of establishment of cell polarity | 1.69E-04 |
| 20 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.28E-04 |
| 21 | GO:0000381: regulation of alternative mRNA splicing, via spliceosome | 2.30E-04 |
| 22 | GO:0045324: late endosome to vacuole transport | 2.30E-04 |
| 23 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 2.30E-04 |
| 24 | GO:0008219: cell death | 2.54E-04 |
| 25 | GO:0034052: positive regulation of plant-type hypersensitive response | 2.95E-04 |
| 26 | GO:0007029: endoplasmic reticulum organization | 2.95E-04 |
| 27 | GO:0010225: response to UV-C | 2.95E-04 |
| 28 | GO:0032876: negative regulation of DNA endoreduplication | 2.95E-04 |
| 29 | GO:0006828: manganese ion transport | 3.65E-04 |
| 30 | GO:0006751: glutathione catabolic process | 3.65E-04 |
| 31 | GO:0048232: male gamete generation | 3.65E-04 |
| 32 | GO:0031053: primary miRNA processing | 3.65E-04 |
| 33 | GO:0006397: mRNA processing | 4.34E-04 |
| 34 | GO:0033962: cytoplasmic mRNA processing body assembly | 4.36E-04 |
| 35 | GO:0017148: negative regulation of translation | 4.36E-04 |
| 36 | GO:0048509: regulation of meristem development | 4.36E-04 |
| 37 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 5.11E-04 |
| 38 | GO:0009846: pollen germination | 5.19E-04 |
| 39 | GO:1900150: regulation of defense response to fungus | 5.89E-04 |
| 40 | GO:0048766: root hair initiation | 5.89E-04 |
| 41 | GO:0006875: cellular metal ion homeostasis | 5.89E-04 |
| 42 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 6.69E-04 |
| 43 | GO:0048589: developmental growth | 7.52E-04 |
| 44 | GO:0010267: production of ta-siRNAs involved in RNA interference | 8.38E-04 |
| 45 | GO:0008202: steroid metabolic process | 8.38E-04 |
| 46 | GO:0009555: pollen development | 8.42E-04 |
| 47 | GO:0006896: Golgi to vacuole transport | 9.24E-04 |
| 48 | GO:0006298: mismatch repair | 9.24E-04 |
| 49 | GO:0006816: calcium ion transport | 1.01E-03 |
| 50 | GO:0008361: regulation of cell size | 1.11E-03 |
| 51 | GO:0007030: Golgi organization | 1.40E-03 |
| 52 | GO:0008380: RNA splicing | 1.55E-03 |
| 53 | GO:0010187: negative regulation of seed germination | 1.61E-03 |
| 54 | GO:0006289: nucleotide-excision repair | 1.61E-03 |
| 55 | GO:0016575: histone deacetylation | 1.72E-03 |
| 56 | GO:0009693: ethylene biosynthetic process | 2.06E-03 |
| 57 | GO:0051028: mRNA transport | 2.30E-03 |
| 58 | GO:0008360: regulation of cell shape | 2.55E-03 |
| 59 | GO:0006623: protein targeting to vacuole | 2.80E-03 |
| 60 | GO:0009556: microsporogenesis | 2.80E-03 |
| 61 | GO:0016579: protein deubiquitination | 3.63E-03 |
| 62 | GO:0009816: defense response to bacterium, incompatible interaction | 3.91E-03 |
| 63 | GO:0016049: cell growth | 4.36E-03 |
| 64 | GO:0006897: endocytosis | 5.98E-03 |
| 65 | GO:0000209: protein polyubiquitination | 6.50E-03 |
| 66 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 7.22E-03 |
| 67 | GO:0010224: response to UV-B | 7.97E-03 |
| 68 | GO:0006096: glycolytic process | 8.74E-03 |
| 69 | GO:0048367: shoot system development | 8.93E-03 |
| 70 | GO:0009626: plant-type hypersensitive response | 9.13E-03 |
| 71 | GO:0009553: embryo sac development | 9.74E-03 |
| 72 | GO:0010150: leaf senescence | 1.46E-02 |
| 73 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.58E-02 |
| 74 | GO:0006470: protein dephosphorylation | 1.61E-02 |
| 75 | GO:0006952: defense response | 1.77E-02 |
| 76 | GO:0009860: pollen tube growth | 2.10E-02 |
| 77 | GO:0010200: response to chitin | 2.38E-02 |
| 78 | GO:0016192: vesicle-mediated transport | 2.41E-02 |
| 79 | GO:0046777: protein autophosphorylation | 2.44E-02 |
| 80 | GO:0045892: negative regulation of transcription, DNA-templated | 2.67E-02 |
| 81 | GO:0009737: response to abscisic acid | 2.76E-02 |
| 82 | GO:0006869: lipid transport | 2.82E-02 |
| 83 | GO:0009408: response to heat | 3.07E-02 |
| 84 | GO:0048364: root development | 3.16E-02 |
| 85 | GO:0008152: metabolic process | 3.29E-02 |
| 86 | GO:0009908: flower development | 4.30E-02 |
| 87 | GO:0009651: response to salt stress | 4.34E-02 |
| 88 | GO:0009738: abscisic acid-activated signaling pathway | 4.51E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015410: manganese-transporting ATPase activity | 0.00E+00 |
| 2 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 3 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 4 | GO:0030276: clathrin binding | 1.48E-06 |
| 5 | GO:0005198: structural molecule activity | 1.84E-05 |
| 6 | GO:0017091: AU-rich element binding | 2.53E-05 |
| 7 | GO:0005515: protein binding | 1.14E-04 |
| 8 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.69E-04 |
| 9 | GO:0001106: RNA polymerase II transcription corepressor activity | 2.30E-04 |
| 10 | GO:0004709: MAP kinase kinase kinase activity | 3.65E-04 |
| 11 | GO:0008142: oxysterol binding | 6.69E-04 |
| 12 | GO:0003843: 1,3-beta-D-glucan synthase activity | 6.69E-04 |
| 13 | GO:0004386: helicase activity | 8.44E-04 |
| 14 | GO:0009982: pseudouridine synthase activity | 1.20E-03 |
| 15 | GO:0005388: calcium-transporting ATPase activity | 1.20E-03 |
| 16 | GO:0008017: microtubule binding | 1.36E-03 |
| 17 | GO:0004725: protein tyrosine phosphatase activity | 1.50E-03 |
| 18 | GO:0004407: histone deacetylase activity | 1.61E-03 |
| 19 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.83E-03 |
| 20 | GO:0008536: Ran GTPase binding | 2.55E-03 |
| 21 | GO:0004872: receptor activity | 2.80E-03 |
| 22 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 2.94E-03 |
| 23 | GO:0003729: mRNA binding | 3.33E-03 |
| 24 | GO:0003684: damaged DNA binding | 3.34E-03 |
| 25 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 3.48E-03 |
| 26 | GO:0003924: GTPase activity | 3.61E-03 |
| 27 | GO:0008289: lipid binding | 5.00E-03 |
| 28 | GO:0003697: single-stranded DNA binding | 5.31E-03 |
| 29 | GO:0035091: phosphatidylinositol binding | 6.67E-03 |
| 30 | GO:0005516: calmodulin binding | 9.59E-03 |
| 31 | GO:0016746: transferase activity, transferring acyl groups | 1.02E-02 |
| 32 | GO:0008026: ATP-dependent helicase activity | 1.04E-02 |
| 33 | GO:0005525: GTP binding | 1.05E-02 |
| 34 | GO:0008565: protein transporter activity | 1.32E-02 |
| 35 | GO:0005524: ATP binding | 1.37E-02 |
| 36 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.73E-02 |
| 37 | GO:0061630: ubiquitin protein ligase activity | 2.41E-02 |
| 38 | GO:0042803: protein homodimerization activity | 2.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 2 | GO:0071942: XPC complex | 0.00E+00 |
| 3 | GO:0000111: nucleotide-excision repair factor 2 complex | 0.00E+00 |
| 4 | GO:0008305: integrin complex | 0.00E+00 |
| 5 | GO:0005829: cytosol | 1.21E-08 |
| 6 | GO:0009506: plasmodesma | 4.91E-07 |
| 7 | GO:0030127: COPII vesicle coat | 2.33E-06 |
| 8 | GO:0000139: Golgi membrane | 4.17E-06 |
| 9 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 4.77E-06 |
| 10 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 2.53E-05 |
| 11 | GO:0045334: clathrin-coated endocytic vesicle | 2.53E-05 |
| 12 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 2.53E-05 |
| 13 | GO:0005846: nuclear cap binding complex | 6.44E-05 |
| 14 | GO:0045254: pyruvate dehydrogenase complex | 6.44E-05 |
| 15 | GO:0030136: clathrin-coated vesicle | 8.63E-05 |
| 16 | GO:0030130: clathrin coat of trans-Golgi network vesicle | 1.13E-04 |
| 17 | GO:0030132: clathrin coat of coated pit | 1.13E-04 |
| 18 | GO:0010445: nuclear dicing body | 2.30E-04 |
| 19 | GO:0005643: nuclear pore | 2.54E-04 |
| 20 | GO:0030126: COPI vesicle coat | 2.95E-04 |
| 21 | GO:0000118: histone deacetylase complex | 4.36E-04 |
| 22 | GO:0005794: Golgi apparatus | 4.81E-04 |
| 23 | GO:0000148: 1,3-beta-D-glucan synthase complex | 6.69E-04 |
| 24 | GO:0019013: viral nucleocapsid | 1.20E-03 |
| 25 | GO:0005874: microtubule | 2.38E-03 |
| 26 | GO:0005770: late endosome | 2.55E-03 |
| 27 | GO:0009504: cell plate | 2.80E-03 |
| 28 | GO:0031965: nuclear membrane | 2.80E-03 |
| 29 | GO:0000785: chromatin | 3.07E-03 |
| 30 | GO:0030529: intracellular ribonucleoprotein complex | 3.77E-03 |
| 31 | GO:0000932: P-body | 3.77E-03 |
| 32 | GO:0005634: nucleus | 4.74E-03 |
| 33 | GO:0031902: late endosome membrane | 5.98E-03 |
| 34 | GO:0005886: plasma membrane | 6.24E-03 |
| 35 | GO:0005681: spliceosomal complex | 8.74E-03 |
| 36 | GO:0016607: nuclear speck | 8.93E-03 |
| 37 | GO:0005774: vacuolar membrane | 9.72E-03 |
| 38 | GO:0012505: endomembrane system | 9.74E-03 |
| 39 | GO:0009524: phragmoplast | 1.21E-02 |
| 40 | GO:0005759: mitochondrial matrix | 1.37E-02 |
| 41 | GO:0005789: endoplasmic reticulum membrane | 1.98E-02 |
| 42 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.13E-02 |
| 43 | GO:0005737: cytoplasm | 2.94E-02 |