co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G10300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071311: cellular response to acetate	0.00E+00
2	GO:0071260: cellular response to mechanical stimulus	0.00E+00
3	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
4	GO:0042906: xanthine transport	0.00E+00
5	GO:0010203: response to very low fluence red light stimulus	0.00E+00
6	GO:0010378: temperature compensation of the circadian clock	0.00E+00
7	GO:0000380: alternative mRNA splicing, via spliceosome	1.03E-04
8	GO:0009817: defense response to fungus, incompatible interaction	1.12E-04
9	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	3.19E-04
10	GO:0046167: glycerol-3-phosphate biosynthetic process	3.19E-04
11	GO:1990641: response to iron ion starvation	3.19E-04
12	GO:1902265: abscisic acid homeostasis	3.19E-04
13	GO:0015812: gamma-aminobutyric acid transport	3.19E-04
14	GO:0032958: inositol phosphate biosynthetic process	3.19E-04
15	GO:0009819: drought recovery	3.32E-04
16	GO:0009415: response to water	3.32E-04
17	GO:0015914: phospholipid transport	6.97E-04
18	GO:0015720: allantoin transport	6.97E-04
19	GO:0006611: protein export from nucleus	6.97E-04
20	GO:0006641: triglyceride metabolic process	6.97E-04
21	GO:0015857: uracil transport	6.97E-04
22	GO:0030259: lipid glycosylation	6.97E-04
23	GO:0006101: citrate metabolic process	6.97E-04
24	GO:0030003: cellular cation homeostasis	6.97E-04
25	GO:0006816: calcium ion transport	7.78E-04
26	GO:0006970: response to osmotic stress	8.06E-04
27	GO:0006811: ion transport	1.10E-03
28	GO:0030029: actin filament-based process	1.13E-03
29	GO:0000055: ribosomal large subunit export from nucleus	1.13E-03
30	GO:0042256: mature ribosome assembly	1.13E-03
31	GO:0042344: indole glucosinolate catabolic process	1.13E-03
32	GO:0006954: inflammatory response	1.13E-03
33	GO:0019563: glycerol catabolic process	1.13E-03
34	GO:0071230: cellular response to amino acid stimulus	1.13E-03
35	GO:0016255: attachment of GPI anchor to protein	1.13E-03
36	GO:0017006: protein-tetrapyrrole linkage	1.13E-03
37	GO:0071705: nitrogen compound transport	1.13E-03
38	GO:0009409: response to cold	1.24E-03
39	GO:0009737: response to abscisic acid	1.29E-03
40	GO:0019438: aromatic compound biosynthetic process	1.62E-03
41	GO:0006624: vacuolar protein processing	1.62E-03
42	GO:0006020: inositol metabolic process	1.62E-03
43	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	1.62E-03
44	GO:0032456: endocytic recycling	1.62E-03
45	GO:0009584: detection of visible light	1.62E-03
46	GO:0006072: glycerol-3-phosphate metabolic process	1.62E-03
47	GO:0015749: monosaccharide transport	1.62E-03
48	GO:1901332: negative regulation of lateral root development	1.62E-03
49	GO:0009963: positive regulation of flavonoid biosynthetic process	1.62E-03
50	GO:0006882: cellular zinc ion homeostasis	1.62E-03
51	GO:0007623: circadian rhythm	1.67E-03
52	GO:0042542: response to hydrogen peroxide	1.72E-03
53	GO:0006874: cellular calcium ion homeostasis	1.72E-03
54	GO:0008643: carbohydrate transport	2.00E-03
55	GO:0006646: phosphatidylethanolamine biosynthetic process	2.18E-03
56	GO:0009687: abscisic acid metabolic process	2.18E-03
57	GO:0015743: malate transport	2.18E-03
58	GO:0010600: regulation of auxin biosynthetic process	2.18E-03
59	GO:0010188: response to microbial phytotoxin	2.18E-03
60	GO:0006878: cellular copper ion homeostasis	2.18E-03
61	GO:0006012: galactose metabolic process	2.25E-03
62	GO:0009585: red, far-red light phototransduction	2.65E-03
63	GO:0007029: endoplasmic reticulum organization	2.78E-03
64	GO:0048578: positive regulation of long-day photoperiodism, flowering	2.78E-03
65	GO:0006656: phosphatidylcholine biosynthetic process	2.78E-03
66	GO:0043097: pyrimidine nucleoside salvage	2.78E-03
67	GO:0046323: glucose import	3.08E-03
68	GO:0048544: recognition of pollen	3.32E-03
69	GO:0042732: D-xylose metabolic process	3.43E-03
70	GO:0006206: pyrimidine nucleobase metabolic process	3.43E-03
71	GO:0007035: vacuolar acidification	3.43E-03
72	GO:0000741: karyogamy	3.43E-03
73	GO:0008654: phospholipid biosynthetic process	3.56E-03
74	GO:0006635: fatty acid beta-oxidation	3.81E-03
75	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	4.13E-03
76	GO:0045926: negative regulation of growth	4.13E-03
77	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.13E-03
78	GO:0017148: negative regulation of translation	4.13E-03
79	GO:0009651: response to salt stress	4.15E-03
80	GO:0080167: response to karrikin	4.52E-03
81	GO:0005975: carbohydrate metabolic process	4.86E-03
82	GO:0010044: response to aluminum ion	4.87E-03
83	GO:0010161: red light signaling pathway	4.87E-03
84	GO:0098869: cellular oxidant detoxification	4.87E-03
85	GO:0006333: chromatin assembly or disassembly	4.87E-03
86	GO:0010286: heat acclimation	4.90E-03
87	GO:0006102: isocitrate metabolic process	5.66E-03
88	GO:0006644: phospholipid metabolic process	5.66E-03
89	GO:0009061: anaerobic respiration	5.66E-03
90	GO:0010928: regulation of auxin mediated signaling pathway	5.66E-03
91	GO:0006491: N-glycan processing	5.66E-03
92	GO:0032508: DNA duplex unwinding	5.66E-03
93	GO:0048573: photoperiodism, flowering	6.48E-03
94	GO:0006950: response to stress	6.48E-03
95	GO:0009827: plant-type cell wall modification	6.49E-03
96	GO:0001510: RNA methylation	6.49E-03
97	GO:0046685: response to arsenic-containing substance	7.36E-03
98	GO:0006098: pentose-phosphate shunt	7.36E-03
99	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	7.36E-03
100	GO:0046916: cellular transition metal ion homeostasis	7.36E-03
101	GO:0010218: response to far red light	7.93E-03
102	GO:0009638: phototropism	8.27E-03
103	GO:0030042: actin filament depolymerization	8.27E-03
104	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.27E-03
105	GO:0008202: steroid metabolic process	8.27E-03
106	GO:0010043: response to zinc ion	8.31E-03
107	GO:0010119: regulation of stomatal movement	8.31E-03
108	GO:0009631: cold acclimation	8.31E-03
109	GO:0045087: innate immune response	9.12E-03
110	GO:0055062: phosphate ion homeostasis	9.22E-03
111	GO:0009970: cellular response to sulfate starvation	9.22E-03
112	GO:0006995: cellular response to nitrogen starvation	9.22E-03
113	GO:0006099: tricarboxylic acid cycle	9.54E-03
114	GO:0009682: induced systemic resistance	1.02E-02
115	GO:0052544: defense response by callose deposition in cell wall	1.02E-02
116	GO:0009617: response to bacterium	1.04E-02
117	GO:0006897: endocytosis	1.09E-02
118	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.23E-02
119	GO:2000012: regulation of auxin polar transport	1.23E-02
120	GO:0010102: lateral root morphogenesis	1.23E-02
121	GO:0006807: nitrogen compound metabolic process	1.23E-02
122	GO:0009266: response to temperature stimulus	1.34E-02
123	GO:0007034: vacuolar transport	1.34E-02
124	GO:0002237: response to molecule of bacterial origin	1.34E-02
125	GO:0007015: actin filament organization	1.34E-02
126	GO:0000165: MAPK cascade	1.43E-02
127	GO:0009969: xyloglucan biosynthetic process	1.45E-02
128	GO:0019853: L-ascorbic acid biosynthetic process	1.45E-02
129	GO:0010030: positive regulation of seed germination	1.45E-02
130	GO:0034976: response to endoplasmic reticulum stress	1.57E-02
131	GO:0051603: proteolysis involved in cellular protein catabolic process	1.65E-02
132	GO:0006406: mRNA export from nucleus	1.69E-02
133	GO:0006857: oligopeptide transport	1.71E-02
134	GO:0006825: copper ion transport	1.81E-02
135	GO:0016575: histone deacetylation	1.81E-02
136	GO:0009695: jasmonic acid biosynthetic process	1.81E-02
137	GO:0009738: abscisic acid-activated signaling pathway	1.85E-02
138	GO:0051260: protein homooligomerization	1.94E-02
139	GO:0009416: response to light stimulus	1.94E-02
140	GO:0009269: response to desiccation	1.94E-02
141	GO:0003333: amino acid transmembrane transport	1.94E-02
142	GO:0019748: secondary metabolic process	2.07E-02
143	GO:0010017: red or far-red light signaling pathway	2.07E-02
144	GO:0035428: hexose transmembrane transport	2.07E-02
145	GO:0035556: intracellular signal transduction	2.11E-02
146	GO:0044550: secondary metabolite biosynthetic process	2.12E-02
147	GO:0009693: ethylene biosynthetic process	2.20E-02
148	GO:0071215: cellular response to abscisic acid stimulus	2.20E-02
149	GO:0019722: calcium-mediated signaling	2.33E-02
150	GO:0009306: protein secretion	2.33E-02
151	GO:0006396: RNA processing	2.34E-02
152	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.47E-02
153	GO:0070417: cellular response to cold	2.47E-02
154	GO:0010051: xylem and phloem pattern formation	2.61E-02
155	GO:0015991: ATP hydrolysis coupled proton transport	2.61E-02
156	GO:0042631: cellular response to water deprivation	2.61E-02
157	GO:0000226: microtubule cytoskeleton organization	2.61E-02
158	GO:0080022: primary root development	2.61E-02
159	GO:0042391: regulation of membrane potential	2.61E-02
160	GO:0034220: ion transmembrane transport	2.61E-02
161	GO:0010501: RNA secondary structure unwinding	2.61E-02
162	GO:0000413: protein peptidyl-prolyl isomerization	2.61E-02
163	GO:0010197: polar nucleus fusion	2.75E-02
164	GO:0006520: cellular amino acid metabolic process	2.75E-02
165	GO:0006814: sodium ion transport	2.90E-02
166	GO:0042752: regulation of circadian rhythm	2.90E-02
167	GO:0009646: response to absence of light	2.90E-02
168	GO:0015986: ATP synthesis coupled proton transport	2.90E-02
169	GO:0009058: biosynthetic process	3.00E-02
170	GO:0009630: gravitropism	3.35E-02
171	GO:0016310: phosphorylation	3.45E-02
172	GO:1901657: glycosyl compound metabolic process	3.51E-02
173	GO:0019760: glucosinolate metabolic process	3.67E-02
174	GO:0010252: auxin homeostasis	3.67E-02
175	GO:0006904: vesicle docking involved in exocytosis	3.83E-02
176	GO:0001666: response to hypoxia	4.16E-02
177	GO:0010029: regulation of seed germination	4.33E-02
178	GO:0055114: oxidation-reduction process	4.65E-02
179	GO:0010468: regulation of gene expression	4.66E-02
180	GO:0016049: cell growth	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
2	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
3	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
4	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
5	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
6	GO:0005272: sodium channel activity	0.00E+00
7	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
8	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
9	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
10	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
11	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
12	GO:0009045: xylose isomerase activity	0.00E+00
13	GO:0080082: esculin beta-glucosidase activity	0.00E+00
14	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
15	GO:0004567: beta-mannosidase activity	0.00E+00
16	GO:0004370: glycerol kinase activity	0.00E+00
17	GO:0015276: ligand-gated ion channel activity	0.00E+00
18	GO:0031516: far-red light photoreceptor activity	3.19E-04
19	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	3.19E-04
20	GO:0009679: hexose:proton symporter activity	3.19E-04
21	GO:0035671: enone reductase activity	3.19E-04
22	GO:0000829: inositol heptakisphosphate kinase activity	3.19E-04
23	GO:0080079: cellobiose glucosidase activity	3.19E-04
24	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	3.19E-04
25	GO:0046870: cadmium ion binding	3.19E-04
26	GO:0050200: plasmalogen synthase activity	3.19E-04
27	GO:0008066: glutamate receptor activity	3.19E-04
28	GO:0016274: protein-arginine N-methyltransferase activity	3.19E-04
29	GO:0000828: inositol hexakisphosphate kinase activity	3.19E-04
30	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	3.19E-04
31	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	3.19E-04
32	GO:0030275: LRR domain binding	3.19E-04
33	GO:0004525: ribonuclease III activity	3.32E-04
34	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	6.97E-04
35	GO:0032791: lead ion binding	6.97E-04
36	GO:0005274: allantoin uptake transmembrane transporter activity	6.97E-04
37	GO:0009883: red or far-red light photoreceptor activity	6.97E-04
38	GO:0004609: phosphatidylserine decarboxylase activity	6.97E-04
39	GO:0003994: aconitate hydratase activity	6.97E-04
40	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	6.97E-04
41	GO:0004839: ubiquitin activating enzyme activity	6.97E-04
42	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	6.97E-04
43	GO:0019200: carbohydrate kinase activity	6.97E-04
44	GO:0004352: glutamate dehydrogenase (NAD+) activity	6.97E-04
45	GO:0015180: L-alanine transmembrane transporter activity	6.97E-04
46	GO:0005262: calcium channel activity	1.01E-03
47	GO:0019829: cation-transporting ATPase activity	1.13E-03
48	GO:0017150: tRNA dihydrouridine synthase activity	1.13E-03
49	GO:0008020: G-protein coupled photoreceptor activity	1.13E-03
50	GO:0004096: catalase activity	1.13E-03
51	GO:0050897: cobalt ion binding	1.17E-03
52	GO:0004970: ionotropic glutamate receptor activity	1.26E-03
53	GO:0005217: intracellular ligand-gated ion channel activity	1.26E-03
54	GO:0008422: beta-glucosidase activity	1.47E-03
55	GO:0005351: sugar:proton symporter activity	1.61E-03
56	GO:0043023: ribosomal large subunit binding	1.62E-03
57	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.62E-03
58	GO:0004300: enoyl-CoA hydratase activity	1.62E-03
59	GO:0015189: L-lysine transmembrane transporter activity	1.62E-03
60	GO:0048027: mRNA 5'-UTR binding	1.62E-03
61	GO:0004108: citrate (Si)-synthase activity	1.62E-03
62	GO:0030527: structural constituent of chromatin	1.62E-03
63	GO:0015181: arginine transmembrane transporter activity	1.62E-03
64	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.89E-03
65	GO:0004707: MAP kinase activity	1.89E-03
66	GO:0004737: pyruvate decarboxylase activity	2.18E-03
67	GO:0015210: uracil transmembrane transporter activity	2.18E-03
68	GO:0005313: L-glutamate transmembrane transporter activity	2.18E-03
69	GO:0008526: phosphatidylinositol transporter activity	2.18E-03
70	GO:0005253: anion channel activity	2.18E-03
71	GO:0010294: abscisic acid glucosyltransferase activity	2.78E-03
72	GO:0015145: monosaccharide transmembrane transporter activity	2.78E-03
73	GO:0008641: small protein activating enzyme activity	2.78E-03
74	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.78E-03
75	GO:0030976: thiamine pyrophosphate binding	3.43E-03
76	GO:0019137: thioglucosidase activity	3.43E-03
77	GO:0015562: efflux transmembrane transporter activity	3.43E-03
78	GO:0051117: ATPase binding	3.43E-03
79	GO:0000293: ferric-chelate reductase activity	3.43E-03
80	GO:0016301: kinase activity	3.46E-03
81	GO:0004849: uridine kinase activity	4.13E-03
82	GO:0070300: phosphatidic acid binding	4.13E-03
83	GO:0003950: NAD+ ADP-ribosyltransferase activity	4.13E-03
84	GO:0004602: glutathione peroxidase activity	4.13E-03
85	GO:0005261: cation channel activity	4.13E-03
86	GO:0016831: carboxy-lyase activity	4.87E-03
87	GO:0015140: malate transmembrane transporter activity	4.87E-03
88	GO:0004034: aldose 1-epimerase activity	5.66E-03
89	GO:0004033: aldo-keto reductase (NADP) activity	5.66E-03
90	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	5.72E-03
91	GO:0102483: scopolin beta-glucosidase activity	6.48E-03
92	GO:0005267: potassium channel activity	6.49E-03
93	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	6.49E-03
94	GO:0005375: copper ion transmembrane transporter activity	6.49E-03
95	GO:0015144: carbohydrate transmembrane transporter activity	6.95E-03
96	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	7.36E-03
97	GO:0008171: O-methyltransferase activity	9.22E-03
98	GO:0015020: glucuronosyltransferase activity	9.22E-03
99	GO:0004673: protein histidine kinase activity	9.22E-03
100	GO:0004177: aminopeptidase activity	1.02E-02
101	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.02E-02
102	GO:0000155: phosphorelay sensor kinase activity	1.23E-02
103	GO:0004565: beta-galactosidase activity	1.23E-02
104	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.23E-02
105	GO:0031624: ubiquitin conjugating enzyme binding	1.34E-02
106	GO:0004175: endopeptidase activity	1.34E-02
107	GO:0030552: cAMP binding	1.45E-02
108	GO:0030553: cGMP binding	1.45E-02
109	GO:0004407: histone deacetylase activity	1.69E-02
110	GO:0031625: ubiquitin protein ligase binding	1.76E-02
111	GO:0043424: protein histidine kinase binding	1.81E-02
112	GO:0005216: ion channel activity	1.81E-02
113	GO:0008324: cation transmembrane transporter activity	1.81E-02
114	GO:0004497: monooxygenase activity	1.91E-02
115	GO:0005215: transporter activity	2.25E-02
116	GO:0003756: protein disulfide isomerase activity	2.33E-02
117	GO:0005249: voltage-gated potassium channel activity	2.61E-02
118	GO:0030551: cyclic nucleotide binding	2.61E-02
119	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.64E-02
120	GO:0005355: glucose transmembrane transporter activity	2.90E-02
121	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.93E-02
122	GO:0030246: carbohydrate binding	3.01E-02
123	GO:0005507: copper ion binding	3.27E-02
124	GO:0004197: cysteine-type endopeptidase activity	3.35E-02
125	GO:0005524: ATP binding	3.36E-02
126	GO:0000156: phosphorelay response regulator activity	3.51E-02
127	GO:0004672: protein kinase activity	3.61E-02
128	GO:0015297: antiporter activity	3.74E-02
129	GO:0005200: structural constituent of cytoskeleton	3.83E-02
130	GO:0020037: heme binding	4.06E-02
131	GO:0008375: acetylglucosaminyltransferase activity	4.50E-02
132	GO:0030247: polysaccharide binding	4.67E-02
133	GO:0005509: calcium ion binding	4.83E-02
134	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.84E-02
135	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	6.06E-06
2	GO:0005777: peroxisome	2.46E-05
3	GO:0005886: plasma membrane	3.79E-05
4	GO:0012510: trans-Golgi network transport vesicle membrane	3.19E-04
5	GO:0016020: membrane	4.33E-04
6	GO:0042765: GPI-anchor transamidase complex	1.13E-03
7	GO:0000323: lytic vacuole	1.62E-03
8	GO:0016471: vacuolar proton-transporting V-type ATPase complex	2.18E-03
9	GO:0005773: vacuole	2.26E-03
10	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	2.78E-03
11	GO:0005851: eukaryotic translation initiation factor 2B complex	3.43E-03
12	GO:0000815: ESCRT III complex	4.13E-03
13	GO:0016363: nuclear matrix	4.13E-03
14	GO:0005829: cytosol	4.63E-03
15	GO:0030131: clathrin adaptor complex	5.66E-03
16	GO:0005618: cell wall	6.32E-03
17	GO:0005737: cytoplasm	6.98E-03
18	GO:0000151: ubiquitin ligase complex	7.19E-03
19	GO:0016604: nuclear body	8.27E-03
20	GO:0030125: clathrin vesicle coat	9.22E-03
21	GO:0009505: plant-type cell wall	9.66E-03
22	GO:0005783: endoplasmic reticulum	1.15E-02
23	GO:0009506: plasmodesma	1.45E-02
24	GO:0031966: mitochondrial membrane	1.48E-02
25	GO:0005768: endosome	1.59E-02
26	GO:0005794: Golgi apparatus	1.77E-02
27	GO:0005905: clathrin-coated pit	1.94E-02
28	GO:0010008: endosome membrane	1.95E-02
29	GO:0015629: actin cytoskeleton	2.20E-02
30	GO:0005774: vacuolar membrane	2.78E-02
31	GO:0031965: nuclear membrane	3.05E-02
32	GO:0048046: apoplast	3.07E-02
33	GO:0000785: chromatin	3.35E-02
34	GO:0043231: intracellular membrane-bounded organelle	3.51E-02
35	GO:0009705: plant-type vacuole membrane	3.92E-02